RNA–Protein interactions for RNA: ENST00000505020.1

CDH9-202, Transcript of cadherin 9, humanhuman

TSL 2

Gene CDH9, Length 1,836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-202ENST00000505020 FAM198AQ9UFP1 575 aa8.53□□□□□ -1.04
CDH9-202ENST00000505020 PLAAQ9Y263 795 aa8.53□□□□□ -1.04
CDH9-202ENST00000505020 EFR3BQ9Y2G0 817 aa8.53□□□□□ -1.04
CDH9-202ENST00000505020 R3HCC1Q9Y3T6 440 aaKnown RBP8.53□□□□□ -1.04
CDH9-202ENST00000505020 MYCLP1P12525 358 aaPredicted RBP8.52□□□□□ -1.04
CDH9-202ENST00000505020 GLULP15104 373 aa8.52□□□□□ -1.04
CDH9-202ENST00000505020 SNX16P57768 344 aa8.52□□□□□ -1.04
CDH9-202ENST00000505020 MEI1Q5TIA1 1274 aa8.52□□□□□ -1.04
CDH9-202ENST00000505020 TSEN2Q8NCE0 465 aaKnown RBP8.52□□□□□ -1.04
CDH9-202ENST00000505020 FLCNQ8NFG4 579 aa8.52□□□□□ -1.04
CDH9-202ENST00000505020 MAP3K14Q99558 947 aa8.52□□□□□ -1.04
CDH9-202ENST00000505020 C22orf23Q9BZE7 217 aa8.52□□□□□ -1.04
CDH9-202ENST00000505020 CAAP1Q9H8G2 361 aa8.52□□□□□ -1.04
CDH9-202ENST00000505020 OBP2AQ9NY56 170 aa8.52□□□□□ -1.04
CDH9-202ENST00000505020 GTF2IRD1Q9UHL9 959 aa8.52□□□□□ -1.04
CDH9-202ENST00000505020 RABL2BQ9UNT1 228 aa8.52□□□□□ -1.04
CDH9-202ENST00000505020 FAM170AA1A519 330 aa8.52□□□□□ -1.05
CDH9-202ENST00000505020 TYRP1P17643 537 aa8.52□□□□□ -1.05
CDH9-202ENST00000505020 CHAF1AQ13111 956 aaPredicted RBP8.52□□□□□ -1.05
CDH9-202ENST00000505020 TM4SF20Q53R12 229 aa8.52□□□□□ -1.05
CDH9-202ENST00000505020 C2orf27AQ580R0 203 aa8.52□□□□□ -1.05
CDH9-202ENST00000505020 MZT2BQ6NZ67 158 aa8.52□□□□□ -1.05
CDH9-202ENST00000505020 WAPLQ7Z5K2 1190 aa8.52□□□□□ -1.05
CDH9-202ENST00000505020 PNMA8AQ86V59 439 aaPredicted RBP8.52□□□□□ -1.05
CDH9-202ENST00000505020 ZNF713Q8N859 430 aaPredicted RBP8.52□□□□□ -1.05
CDH9-202ENST00000505020 HOOK2Q96ED9 719 aa8.52□□□□□ -1.05
CDH9-202ENST00000505020 ELAC2Q9BQ52 826 aaKnown RBP8.52□□□□□ -1.05
CDH9-202ENST00000505020 SARGQ9BW04 601 aa8.52□□□□□ -1.05
CDH9-202ENST00000505020 ZSWIM6Q9HCJ5 1215 aa8.52□□□□□ -1.05
CDH9-202ENST00000505020 FKBPLQ9UIM3 349 aa8.52□□□□□ -1.05
CDH9-202ENST00000505020 SMTNL1A8MU46 457 aa8.51□□□□□ -1.05
CDH9-202ENST00000505020 VSTM5A8MXK1 200 aa8.51□□□□□ -1.05
CDH9-202ENST00000505020 GOLGA6L22H0YM25 854 aa8.51□□□□□ -1.05
CDH9-202ENST00000505020 EIF4BP23588 611 aaKnown RBP8.51□□□□□ -1.05
CDH9-202ENST00000505020 UBA7P41226 1012 aa8.51□□□□□ -1.05
CDH9-202ENST00000505020 ARHGEF25Q86VW2 580 aa8.51□□□□□ -1.05
CDH9-202ENST00000505020 CELF2-AS1Q8N7Q2 184 aa8.51□□□□□ -1.05
CDH9-202ENST00000505020 PTCD2Q8WV60 388 aaKnown RBP8.51□□□□□ -1.05
CDH9-202ENST00000505020 ZFPM2Q8WW38 1151 aa8.51□□□□□ -1.05
CDH9-202ENST00000505020 VMP1Q96GC9 406 aa8.51□□□□□ -1.05
CDH9-202ENST00000505020 CDK5RAP3Q96JB5 506 aa8.51□□□□□ -1.05
CDH9-202ENST00000505020 AP1M1Q9BXS5 423 aa8.51□□□□□ -1.05
CDH9-202ENST00000505020 AASDHPPTQ9NRN7 309 aa8.51□□□□□ -1.05
CDH9-202ENST00000505020 TSKSQ9UJT2 592 aa8.51□□□□□ -1.05
CDH9-202ENST00000505020 PCDHB9Q9Y5E1 797 aa8.51□□□□□ -1.05
CDH9-202ENST00000505020 DGKBQ9Y6T7 804 aa8.51□□□□□ -1.05
CDH9-202ENST00000505020 PGRP06401 933 aa8.5□□□□□ -1.05
CDH9-202ENST00000505020 ZNF449Q6P9G9 518 aa8.5□□□□□ -1.05
CDH9-202ENST00000505020 RSRC2Q7L4I2 434 aaKnown RBP8.5□□□□□ -1.05
CDH9-202ENST00000505020 COL26A1Q96A83 441 aa8.5□□□□□ -1.05
CDH9-202ENST00000505020 ANAPC16Q96DE5 110 aa8.5□□□□□ -1.05
CDH9-202ENST00000505020 EIF2AK1Q9BQI3 630 aaKnown RBP8.5□□□□□ -1.05
CDH9-202ENST00000505020 TMEM121BQ9BXQ6 578 aaPredicted RBP8.5□□□□□ -1.05
CDH9-202ENST00000505020 SAP130Q9H0E3 1048 aa8.5□□□□□ -1.05
CDH9-202ENST00000505020 CEP131Q9UPN4 1083 aa8.5□□□□□ -1.05
CDH9-202ENST00000505020 DGKGP49619 791 aa8.5□□□□□ -1.05
CDH9-202ENST00000505020 NAP1L1P55209 391 aaKnown RBP8.5□□□□□ -1.05
CDH9-202ENST00000505020 KIAA2012Q0VF49 1180 aa8.5□□□□□ -1.05
CDH9-202ENST00000505020 DDB1Q16531 1140 aa8.5□□□□□ -1.05
CDH9-202ENST00000505020 OXLD1Q5BKU9 147 aa8.5□□□□□ -1.05
CDH9-202ENST00000505020 TMEM92Q6UXU6 159 aa8.5□□□□□ -1.05
CDH9-202ENST00000505020 TOGARAM2Q6ZUX3 1019 aa8.5□□□□□ -1.05
CDH9-202ENST00000505020 EEPD1Q7L9B9 569 aa8.5□□□□□ -1.05
CDH9-202ENST00000505020 PI4K2BQ8TCG2 481 aa8.5□□□□□ -1.05
CDH9-202ENST00000505020 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.5□□□□□ -1.05
CDH9-202ENST00000505020 BORCS6Q96GS4 357 aa8.5□□□□□ -1.05
CDH9-202ENST00000505020 SPAG5Q96R06 1193 aa8.5□□□□□ -1.05
CDH9-202ENST00000505020 SPON2Q9BUD6 331 aa8.5□□□□□ -1.05
CDH9-202ENST00000505020 TMEM134Q9H6X4 195 aa8.5□□□□□ -1.05
CDH9-202ENST00000505020 ST7Q9NRC1 585 aa8.5□□□□□ -1.05
CDH9-202ENST00000505020 GINM1Q9NU53 330 aa8.5□□□□□ -1.05
CDH9-202ENST00000505020 ZNF180Q9UJW8 692 aa8.5□□□□□ -1.05
CDH9-202ENST00000505020 PRDM4Q9UKN5 801 aa8.5□□□□□ -1.05
CDH9-202ENST00000505020 ERICH4A6NGS2 130 aa8.49□□□□□ -1.05
CDH9-202ENST00000505020 STT3AP46977 705 aa8.49□□□□□ -1.05
CDH9-202ENST00000505020 STK3Q13188 491 aa8.49□□□□□ -1.05
CDH9-202ENST00000505020 LAMC2Q13753 1193 aa8.49□□□□□ -1.05
CDH9-202ENST00000505020 ANKRD45Q5TZF3 282 aa8.49□□□□□ -1.05
CDH9-202ENST00000505020 C1orf122Q6ZSJ8 110 aa8.49□□□□□ -1.05
CDH9-202ENST00000505020 SAMD14Q8IZD0 417 aaPredicted RBP8.49□□□□□ -1.05
CDH9-202ENST00000505020 SH3KBP1Q96B97 665 aa8.49□□□□□ -1.05
CDH9-202ENST00000505020 OSBPL5Q9H0X9 879 aaPredicted RBP8.49□□□□□ -1.05
CDH9-202ENST00000505020 TSPY26PQ9H489 355 aa8.49□□□□□ -1.05
CDH9-202ENST00000505020 PRKAG3Q9UGI9 489 aa8.49□□□□□ -1.05
CDH9-202ENST00000505020 FBXO10Q9UK96 956 aa8.49□□□□□ -1.05
CDH9-202ENST00000505020 MAGED1Q9Y5V3 778 aaPredicted RBP8.49□□□□□ -1.05
CDH9-202ENST00000505020 A0A087X0B3 334 aa8.48□□□□□ -1.05
CDH9-202ENST00000505020 C3orf80F5H4A9 247 aa8.48□□□□□ -1.05
CDH9-202ENST00000505020 PDPK1O15530 556 aa8.48□□□□□ -1.05
CDH9-202ENST00000505020 INMTO95050 263 aa8.48□□□□□ -1.05
CDH9-202ENST00000505020 GYS1P13807 737 aa8.48□□□□□ -1.05
CDH9-202ENST00000505020 C1orf228Q6PIY5 440 aa8.48□□□□□ -1.05
CDH9-202ENST00000505020 ERMP1Q7Z2K6 904 aa8.48□□□□□ -1.05
CDH9-202ENST00000505020 ARL10Q8N8L6 244 aa8.48□□□□□ -1.05
CDH9-202ENST00000505020 MFSD3Q96ES6 412 aa8.48□□□□□ -1.05
CDH9-202ENST00000505020 PAIP2Q9BPZ3 127 aaKnown RBP8.48□□□□□ -1.05
CDH9-202ENST00000505020 SNX5Q9Y5X3 404 aa8.48□□□□□ -1.05
CDH9-202ENST00000505020 E2F8A0AVK6 867 aa8.47□□□□□ -1.05
CDH9-202ENST00000505020 IDEP14735 1019 aa8.47□□□□□ -1.05
CDH9-202ENST00000505020 SOX5P35711 763 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms