RNA–Protein interactions for RNA: ENST00000504701.5

CDC42SE2-207, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-207ENST00000504701 KIF16BQ96L93 1317 aa28.29■■■□□ 2.12
CDC42SE2-207ENST00000504701 CACNB3P54284 484 aa28.29■■■□□ 2.12
CDC42SE2-207ENST00000504701 INTS3Q68E01 1043 aaKnown RBP28.29■■■□□ 2.12
CDC42SE2-207ENST00000504701 CCDC85CA6NKD9 419 aa28.28■■■□□ 2.12
CDC42SE2-207ENST00000504701 TBC1D8O95759 1140 aa28.28■■■□□ 2.12
CDC42SE2-207ENST00000504701 SLC5A1P13866 664 aa28.28■■■□□ 2.12
CDC42SE2-207ENST00000504701 TRIM27P14373 513 aa28.28■■■□□ 2.12
CDC42SE2-207ENST00000504701 MAP3K11Q16584 847 aa28.28■■■□□ 2.12
CDC42SE2-207ENST00000504701 SPRYD7Q5W111 196 aa28.28■■■□□ 2.12
CDC42SE2-207ENST00000504701 DIEXFQ68CQ4 756 aaKnown RBP28.28■■■□□ 2.12
CDC42SE2-207ENST00000504701 LPIN2Q92539 896 aa28.28■■■□□ 2.12
CDC42SE2-207ENST00000504701 USP2O75604 605 aaPredicted RBP28.27■■■□□ 2.12
CDC42SE2-207ENST00000504701 ARHGAP45Q92619 1136 aa28.27■■■□□ 2.12
CDC42SE2-207ENST00000504701 FRAT1Q92837 279 aaPredicted RBP28.27■■■□□ 2.12
CDC42SE2-207ENST00000504701 TEPSINQ96N21 525 aa28.27■■■□□ 2.12
CDC42SE2-207ENST00000504701 TMEM39BQ9GZU3 492 aa28.27■■■□□ 2.12
CDC42SE2-207ENST00000504701 CIAO1O76071 339 aa28.26■■■□□ 2.11
CDC42SE2-207ENST00000504701 TM4SF4P48230 202 aa28.26■■■□□ 2.11
CDC42SE2-207ENST00000504701 HNRNPUQ00839 825 aaKnown RBP eCLIP28.26■■■□□ 2.11
CDC42SE2-207ENST00000504701 ATP2B3Q16720 1220 aa28.26■■■□□ 2.11
CDC42SE2-207ENST00000504701 TBC1D22AQ8WUA7 517 aa28.26■■■□□ 2.11
CDC42SE2-207ENST00000504701 CLUAP1Q96AJ1 413 aa28.26■■■□□ 2.11
CDC42SE2-207ENST00000504701 ADORA1P30542 326 aa28.25■■■□□ 2.11
CDC42SE2-207ENST00000504701 GJA5P36382 358 aa28.25■■■□□ 2.11
CDC42SE2-207ENST00000504701 REM2Q8IYK8 340 aaPredicted RBP28.25■■■□□ 2.11
CDC42SE2-207ENST00000504701 R3HDMLQ9H3Y0 253 aa28.25■■■□□ 2.11
CDC42SE2-207ENST00000504701 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.25■■■□□ 2.11
CDC42SE2-207ENST00000504701 LAMB1P07942 1786 aa28.24■■■□□ 2.11
CDC42SE2-207ENST00000504701 PPP1R12BO60237 982 aaPredicted RBP28.24■■■□□ 2.11
CDC42SE2-207ENST00000504701 SUPT20HL1Q3ZLR7 823 aa28.24■■■□□ 2.11
CDC42SE2-207ENST00000504701 SLC10A4Q96EP9 437 aa28.24■■■□□ 2.11
CDC42SE2-207ENST00000504701 WNK4Q96J92 1243 aa28.24■■■□□ 2.11
CDC42SE2-207ENST00000504701 CEP126Q9P2H0 1117 aa28.24■■■□□ 2.11
CDC42SE2-207ENST00000504701 PHKA1P46020 1223 aa28.23■■■□□ 2.11
CDC42SE2-207ENST00000504701 TEKT1Q969V4 418 aa28.23■■■□□ 2.11
CDC42SE2-207ENST00000504701 APOBEC3HQ6NTF7 200 aaKnown RBP28.22■■■□□ 2.11
CDC42SE2-207ENST00000504701 ATF7IPQ6VMQ6 1270 aa28.22■■■□□ 2.11
CDC42SE2-207ENST00000504701 COPRSQ9NQ92 184 aa28.22■■■□□ 2.11
CDC42SE2-207ENST00000504701 IL15P40933 162 aaPredicted RBP28.21■■■□□ 2.11
CDC42SE2-207ENST00000504701 HDLBPQ00341 1268 aaKnown RBP28.21■■■□□ 2.11
CDC42SE2-207ENST00000504701 TNFAIP1Q13829 316 aa28.21■■■□□ 2.11
CDC42SE2-207ENST00000504701 FBXO3Q9UK99 471 aa28.21■■■□□ 2.11
CDC42SE2-207ENST00000504701 SRGAP3O43295 1099 aa28.2■■■□□ 2.1
CDC42SE2-207ENST00000504701 PRDX5P30044 214 aa28.2■■■□□ 2.1
CDC42SE2-207ENST00000504701 ZNF296Q8WUU4 475 aaPredicted RBP28.2■■■□□ 2.1
CDC42SE2-207ENST00000504701 ZDHHC15Q96MV8 337 aa28.2■■■□□ 2.1
CDC42SE2-207ENST00000504701 GNAI3P08754 354 aa28.19■■■□□ 2.1
CDC42SE2-207ENST00000504701 IREB2P48200 963 aaKnown RBP28.19■■■□□ 2.1
CDC42SE2-207ENST00000504701 SREBF2Q12772 1141 aa28.19■■■□□ 2.1
CDC42SE2-207ENST00000504701 DIXDC1Q155Q3 683 aa28.19■■■□□ 2.1
CDC42SE2-207ENST00000504701 CNKSR2Q8WXI2 1034 aa28.19■■■□□ 2.1
CDC42SE2-207ENST00000504701 ELP3Q9H9T3 547 aa28.19■■■□□ 2.1
CDC42SE2-207ENST00000504701 TIMM10P62072 90 aa28.18■■■□□ 2.1
CDC42SE2-207ENST00000504701 TMEM57Q8N5G2 664 aa28.18■■■□□ 2.1
CDC42SE2-207ENST00000504701 IGF2BP3O00425 579 aaKnown RBP eCLIP28.17■■■□□ 2.1
CDC42SE2-207ENST00000504701 TFCP2Q12800 502 aa28.17■■■□□ 2.1
CDC42SE2-207ENST00000504701 WDR66Q8TBY9 1149 aa28.17■■■□□ 2.1
CDC42SE2-207ENST00000504701 PNMA6EA0A0J9YXQ4 647 aa28.16■■■□□ 2.1
CDC42SE2-207ENST00000504701 IPO8O15397 1037 aaKnown RBP28.16■■■□□ 2.1
CDC42SE2-207ENST00000504701 MTX1Q13505 466 aa28.16■■■□□ 2.1
CDC42SE2-207ENST00000504701 PPP1R3FQ6ZSY5 799 aaPredicted RBP28.16■■■□□ 2.1
CDC42SE2-207ENST00000504701 ANKRD13AQ8IZ07 590 aa28.16■■■□□ 2.1
CDC42SE2-207ENST00000504701 SUGT1Q9Y2Z0 365 aa28.16■■■□□ 2.1
CDC42SE2-207ENST00000504701 DAGLAQ9Y4D2 1042 aa28.16■■■□□ 2.1
CDC42SE2-207ENST00000504701 GPR25O00155 361 aa28.15■■■□□ 2.1
CDC42SE2-207ENST00000504701 ZBTB48P10074 688 aaPredicted RBP28.15■■■□□ 2.1
CDC42SE2-207ENST00000504701 TNNI2P48788 182 aa28.15■■■□□ 2.1
CDC42SE2-207ENST00000504701 CCDC102BQ68D86 513 aa28.15■■■□□ 2.1
CDC42SE2-207ENST00000504701 HHIPL2Q6UWX4 724 aa28.15■■■□□ 2.1
CDC42SE2-207ENST00000504701 IFNL1Q8IU54 200 aa28.15■■■□□ 2.1
CDC42SE2-207ENST00000504701 MRIQ9BWK5 157 aa28.15■■■□□ 2.1
CDC42SE2-207ENST00000504701 HDAC5Q9UQL6 1122 aa28.15■■■□□ 2.1
CDC42SE2-207ENST00000504701 MAST3O60307 1309 aa28.15■■■□□ 2.1
CDC42SE2-207ENST00000504701 MANSC4A6NHS7 340 aaPredicted RBP28.14■■■□□ 2.1
CDC42SE2-207ENST00000504701 CTU1Q7Z7A3 348 aaKnown RBP28.14■■■□□ 2.1
CDC42SE2-207ENST00000504701 VGLL4Q14135 290 aa28.13■■■□□ 2.09
CDC42SE2-207ENST00000504701 OPTNQ96CV9 577 aa28.13■■■□□ 2.09
CDC42SE2-207ENST00000504701 MYH2Q9UKX2 1941 aa28.12■■■□□ 2.09
CDC42SE2-207ENST00000504701 A0A1B0GUL7 405 aa28.12■■■□□ 2.09
CDC42SE2-207ENST00000504701 GNAI2P04899 355 aa28.12■■■□□ 2.09
CDC42SE2-207ENST00000504701 RASGRF1Q13972 1273 aa28.12■■■□□ 2.09
CDC42SE2-207ENST00000504701 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.12■■■□□ 2.09
CDC42SE2-207ENST00000504701 PTPN18Q99952 460 aa28.12■■■□□ 2.09
CDC42SE2-207ENST00000504701 NFIAQ12857 509 aa28.11■■■□□ 2.09
CDC42SE2-207ENST00000504701 ZKSCAN2Q63HK3 967 aa28.11■■■□□ 2.09
CDC42SE2-207ENST00000504701 CDC42EP5Q6NZY7 148 aa28.11■■■□□ 2.09
CDC42SE2-207ENST00000504701 XAGE2Q96GT9 111 aa28.11■■■□□ 2.09
CDC42SE2-207ENST00000504701 GNL3LQ9NVN8 582 aaKnown RBP28.11■■■□□ 2.09
CDC42SE2-207ENST00000504701 TMOD2Q9NZR1 351 aa28.11■■■□□ 2.09
CDC42SE2-207ENST00000504701 DENND2AQ9ULE3 1009 aa28.11■■■□□ 2.09
CDC42SE2-207ENST00000504701 UNCXA6NJT0 531 aa28.1■■■□□ 2.09
CDC42SE2-207ENST00000504701 LDHBP07195 334 aaKnown RBP28.1■■■□□ 2.09
CDC42SE2-207ENST00000504701 RLBP1P12271 317 aa28.1■■■□□ 2.09
CDC42SE2-207ENST00000504701 TCP10Q12799 353 aa28.1■■■□□ 2.09
CDC42SE2-207ENST00000504701 CFHR5Q9BXR6 569 aa28.1■■■□□ 2.09
CDC42SE2-207ENST00000504701 C1orf115Q9H7X2 142 aa28.1■■■□□ 2.09
CDC42SE2-207ENST00000504701 MAP3K9P80192 1104 aa28.09■■■□□ 2.09
CDC42SE2-207ENST00000504701 FAM83AQ86UY5 434 aa28.09■■■□□ 2.09
CDC42SE2-207ENST00000504701 SALL1Q9NSC2 1324 aa28.09■■■□□ 2.09
CDC42SE2-207ENST00000504701 AK9Q5TCS8 1911 aa28.08■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms