RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 UPF2Q9HAU5 1272 aaKnown RBP12.52□□□□□ -0.41
TPM3-217ENST00000504663 JAG2Q9Y219 1238 aa12.52□□□□□ -0.41
TPM3-217ENST00000504663 RBM8AQ9Y5S9 174 aaKnown RBP12.52□□□□□ -0.41
TPM3-217ENST00000504663 RPAP1Q9BWH6 1393 aaPredicted RBP12.52□□□□□ -0.41
TPM3-217ENST00000504663 C6orf229H3BNL8 230 aa12.51□□□□□ -0.41
TPM3-217ENST00000504663 C21orf2O43822 256 aa12.51□□□□□ -0.41
TPM3-217ENST00000504663 EIF5BO60841 1220 aaKnown RBP12.51□□□□□ -0.41
TPM3-217ENST00000504663 CD2BP2O95400 341 aaKnown RBP12.51□□□□□ -0.41
TPM3-217ENST00000504663 TMEM132AQ24JP5 1023 aa12.51□□□□□ -0.41
TPM3-217ENST00000504663 SLC9C2Q5TAH2 1124 aa12.51□□□□□ -0.41
TPM3-217ENST00000504663 CC2D2BQ6DHV5 1058 aa12.51□□□□□ -0.41
TPM3-217ENST00000504663 MAGEB6Q8N7X4 407 aa12.51□□□□□ -0.41
TPM3-217ENST00000504663 NLGN2Q8NFZ4 835 aa12.51□□□□□ -0.41
TPM3-217ENST00000504663 NSUN4Q96CB9 384 aaKnown RBP12.51□□□□□ -0.41
TPM3-217ENST00000504663 SNX14Q9Y5W7 946 aa12.51□□□□□ -0.41
TPM3-217ENST00000504663 GPAA1O43292 621 aa12.5□□□□□ -0.41
TPM3-217ENST00000504663 HSPD1P10809 573 aaKnown RBP12.5□□□□□ -0.41
TPM3-217ENST00000504663 ANAPC15P60006 121 aa12.5□□□□□ -0.41
TPM3-217ENST00000504663 KIAA2012Q0VF49 1180 aa12.5□□□□□ -0.41
TPM3-217ENST00000504663 CHAF1AQ13111 956 aaPredicted RBP12.5□□□□□ -0.41
TPM3-217ENST00000504663 VPS37DQ86XT2 251 aa12.5□□□□□ -0.41
TPM3-217ENST00000504663 CERS5Q8N5B7 392 aa12.5□□□□□ -0.41
TPM3-217ENST00000504663 PSMD1Q99460 953 aa12.5□□□□□ -0.41
TPM3-217ENST00000504663 RIOK1Q9BRS2 568 aaKnown RBP12.5□□□□□ -0.41
TPM3-217ENST00000504663 DSCC1Q9BVC3 393 aa12.5□□□□□ -0.41
TPM3-217ENST00000504663 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.5□□□□□ -0.41
TPM3-217ENST00000504663 COA1Q9GZY4 146 aa12.5□□□□□ -0.41
TPM3-217ENST00000504663 EPB41L4AQ9HCS5 686 aaPredicted RBP12.5□□□□□ -0.41
TPM3-217ENST00000504663 NAV1Q8NEY1 1877 aa12.5□□□□□ -0.41
TPM3-217ENST00000504663 ECM29Q5VYK3 1845 aa12.49□□□□□ -0.41
TPM3-217ENST00000504663 SLC27A2O14975 620 aa12.49□□□□□ -0.41
TPM3-217ENST00000504663 RIMBP2O15034 1052 aa12.49□□□□□ -0.41
TPM3-217ENST00000504663 CACNB1Q02641 598 aaPredicted RBP12.49□□□□□ -0.41
TPM3-217ENST00000504663 MECOMQ03112 1051 aa12.49□□□□□ -0.41
TPM3-217ENST00000504663 MAP3K12Q12852 859 aa12.49□□□□□ -0.41
TPM3-217ENST00000504663 WASHC4Q2M389 1173 aa12.49□□□□□ -0.41
TPM3-217ENST00000504663 CCDC93Q567U6 631 aa12.49□□□□□ -0.41
TPM3-217ENST00000504663 ZSCAN25Q6NSZ9 544 aa12.49□□□□□ -0.41
TPM3-217ENST00000504663 KLHL34Q8N239 644 aa12.49□□□□□ -0.41
TPM3-217ENST00000504663 LCORLQ8N3X6 602 aa12.49□□□□□ -0.41
TPM3-217ENST00000504663 STRBPQ96SI9 672 aaKnown RBP12.49□□□□□ -0.41
TPM3-217ENST00000504663 GOLGB1Q14789 3259 aaKnown RBP12.49□□□□□ -0.41
TPM3-217ENST00000504663 BAZ2AQ9UIF9 1905 aaKnown RBP12.49□□□□□ -0.41
TPM3-217ENST00000504663 ZMYM6O95789 1325 aa12.48□□□□□ -0.41
TPM3-217ENST00000504663 YDJCA8MPS7 323 aa12.48□□□□□ -0.41
TPM3-217ENST00000504663 NFKBIEO00221 500 aa12.48□□□□□ -0.41
TPM3-217ENST00000504663 MBD4O95243 580 aa12.48□□□□□ -0.41
TPM3-217ENST00000504663 ANP32AP39687 249 aaKnown RBP12.48□□□□□ -0.41
TPM3-217ENST00000504663 PRELPP51888 382 aa12.48□□□□□ -0.41
TPM3-217ENST00000504663 DOK7Q18PE1 504 aa12.48□□□□□ -0.41
TPM3-217ENST00000504663 LRRFIP1Q32MZ4 808 aaKnown RBP12.48□□□□□ -0.41
TPM3-217ENST00000504663 CREB3L3Q68CJ9 461 aa12.48□□□□□ -0.41
TPM3-217ENST00000504663 STOX1Q6ZVD7 989 aa12.48□□□□□ -0.41
TPM3-217ENST00000504663 WDR66Q8TBY9 1149 aa12.48□□□□□ -0.41
TPM3-217ENST00000504663 NBPF3Q9H094 633 aa12.48□□□□□ -0.41
TPM3-217ENST00000504663 KCNQ5Q9NR82 932 aa12.48□□□□□ -0.41
TPM3-217ENST00000504663 PIM2Q9P1W9 311 aa12.48□□□□□ -0.41
TPM3-217ENST00000504663 ABCF2Q9UG63 623 aa12.48□□□□□ -0.41
TPM3-217ENST00000504663 DICER1Q9UPY3 1922 aaKnown RBP12.47□□□□□ -0.41
TPM3-217ENST00000504663 IGSF3O75054 1194 aa12.47□□□□□ -0.41
TPM3-217ENST00000504663 CYP21A2P08686 494 aa12.47□□□□□ -0.41
TPM3-217ENST00000504663 CYP7A1P22680 504 aa12.47□□□□□ -0.41
TPM3-217ENST00000504663 AOC3Q16853 763 aa12.47□□□□□ -0.41
TPM3-217ENST00000504663 ADCK5Q3MIX3 580 aa12.47□□□□□ -0.41
TPM3-217ENST00000504663 TSGA10IPQ3SY00 556 aa12.47□□□□□ -0.41
TPM3-217ENST00000504663 SNX21Q969T3 373 aa12.47□□□□□ -0.41
TPM3-217ENST00000504663 EYA3Q99504 573 aa12.47□□□□□ -0.41
TPM3-217ENST00000504663 TBC1D2Q9BYX2 928 aa12.47□□□□□ -0.41
TPM3-217ENST00000504663 ZC3H12CQ9C0D7 883 aaKnown RBP12.47□□□□□ -0.41
TPM3-217ENST00000504663 ARMT1Q9H993 441 aa12.47□□□□□ -0.41
TPM3-217ENST00000504663 DBNDD1Q9H9R9 158 aa12.47□□□□□ -0.41
TPM3-217ENST00000504663 LRP2BPQ9P2M1 347 aa12.47□□□□□ -0.41
TPM3-217ENST00000504663 GAKO14976 1311 aa12.46□□□□□ -0.41
TPM3-217ENST00000504663 ECE2O60344 883 aa12.46□□□□□ -0.41
TPM3-217ENST00000504663 DYNLL1P63167 89 aaKnown RBP12.46□□□□□ -0.41
TPM3-217ENST00000504663 RABEP1Q15276 862 aa12.46□□□□□ -0.41
TPM3-217ENST00000504663 GRIPAP1Q4V328 841 aa12.46□□□□□ -0.41
TPM3-217ENST00000504663 DACT2Q5SW24 774 aa12.46□□□□□ -0.41
TPM3-217ENST00000504663 TTLL5Q6EMB2 1281 aa12.46□□□□□ -0.41
TPM3-217ENST00000504663 KIAA1211Q6ZU35 1233 aa12.46□□□□□ -0.41
TPM3-217ENST00000504663 MIGA1Q8NAN2 632 aa12.46□□□□□ -0.41
TPM3-217ENST00000504663 NKX2-3Q8TAU0 364 aa12.46□□□□□ -0.41
TPM3-217ENST00000504663 TTC14Q96N46 770 aa12.46□□□□□ -0.41
TPM3-217ENST00000504663 IPO9Q96P70 1041 aaKnown RBP12.46□□□□□ -0.41
TPM3-217ENST00000504663 MXD3Q9BW11 206 aa12.46□□□□□ -0.41
TPM3-217ENST00000504663 SPON1Q9HCB6 807 aa12.46□□□□□ -0.41
TPM3-217ENST00000504663 RAI14Q9P0K7 980 aa12.46□□□□□ -0.41
TPM3-217ENST00000504663 TACC3Q9Y6A5 838 aa12.46□□□□□ -0.41
TPM3-217ENST00000504663 SBF1O95248 1867 aa12.46□□□□□ -0.42
TPM3-217ENST00000504663 LTBP3Q9NS15 1303 aa12.45□□□□□ -0.42
TPM3-217ENST00000504663 GSG1L2A8MUP6 293 aa12.45□□□□□ -0.42
TPM3-217ENST00000504663 PRKAB2O43741 272 aa12.45□□□□□ -0.42
TPM3-217ENST00000504663 GTF2IP78347 998 aa12.45□□□□□ -0.42
TPM3-217ENST00000504663 DIXDC1Q155Q3 683 aa12.45□□□□□ -0.42
TPM3-217ENST00000504663 ALX1Q15699 326 aa12.45□□□□□ -0.42
TPM3-217ENST00000504663 DALRD3Q5D0E6 543 aaKnown RBP12.45□□□□□ -0.42
TPM3-217ENST00000504663 MFSD14BQ5SR56 506 aa12.45□□□□□ -0.42
TPM3-217ENST00000504663 NAA16Q6N069 864 aaPredicted RBP12.45□□□□□ -0.42
TPM3-217ENST00000504663 TMED8Q6PL24 325 aaPredicted RBP12.45□□□□□ -0.42
TPM3-217ENST00000504663 PODNQ7Z5L7 613 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms