RNA–Protein interactions for RNA: ENST00000504396.1

DHFR-202, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-202ENST00000504396 TNRC18O15417 2968 aaPredicted RBP11.67□□□□□ -0.54
DHFR-202ENST00000504396 DDX58O95786 925 aaKnown RBP11.67□□□□□ -0.54
DHFR-202ENST00000504396 PCCAP05165 728 aaPredicted RBP11.67□□□□□ -0.54
DHFR-202ENST00000504396 ATP2B4P23634 1241 aa11.67□□□□□ -0.54
DHFR-202ENST00000504396 OGFOD1Q8N543 542 aa11.67□□□□□ -0.54
DHFR-202ENST00000504396 CCDC191Q8NCU4 936 aa11.67□□□□□ -0.54
DHFR-202ENST00000504396 CDC5LQ99459 802 aaKnown RBP11.67□□□□□ -0.54
DHFR-202ENST00000504396 PITPNM2Q9BZ72 1349 aa11.67□□□□□ -0.54
DHFR-202ENST00000504396 CALD1Q05682 793 aaKnown RBP11.66□□□□□ -0.54
DHFR-202ENST00000504396 PRKG1Q13976 671 aa11.66□□□□□ -0.54
DHFR-202ENST00000504396 NBPF9Q3BBW0 867 aa11.66□□□□□ -0.54
DHFR-202ENST00000504396 ZNF296Q8WUU4 475 aaPredicted RBP11.66□□□□□ -0.54
DHFR-202ENST00000504396 CDHR5Q9HBB8 845 aa11.66□□□□□ -0.54
DHFR-202ENST00000504396 RABGEF1Q9UJ41 708 aa11.66□□□□□ -0.54
DHFR-202ENST00000504396 SEMA3EO15041 775 aa11.65□□□□□ -0.54
DHFR-202ENST00000504396 SASH1O94885 1247 aa11.65□□□□□ -0.54
DHFR-202ENST00000504396 CTSWP56202 376 aa11.65□□□□□ -0.54
DHFR-202ENST00000504396 PKN2Q16513 984 aaKnown RBP11.65□□□□□ -0.54
DHFR-202ENST00000504396 PRPF38BQ5VTL8 546 aaKnown RBP11.65□□□□□ -0.54
DHFR-202ENST00000504396 PODNQ7Z5L7 613 aa11.65□□□□□ -0.54
DHFR-202ENST00000504396 MRPL50Q8N5N7 158 aaKnown RBP11.65□□□□□ -0.54
DHFR-202ENST00000504396 KCTD12Q96CX2 325 aaKnown RBP11.65□□□□□ -0.54
DHFR-202ENST00000504396 MXD3Q9BW11 206 aa11.65□□□□□ -0.54
DHFR-202ENST00000504396 ADAMTS8Q9UP79 889 aa11.65□□□□□ -0.54
DHFR-202ENST00000504396 SREBF2Q12772 1141 aa11.64□□□□□ -0.55
DHFR-202ENST00000504396 DDX10Q13206 875 aaKnown RBP11.64□□□□□ -0.55
DHFR-202ENST00000504396 METTL22Q9BUU2 404 aaPredicted RBP11.64□□□□□ -0.55
DHFR-202ENST00000504396 NBPF3Q9H094 633 aa11.64□□□□□ -0.55
DHFR-202ENST00000504396 KIAA1468Q9P260 1216 aa11.64□□□□□ -0.55
DHFR-202ENST00000504396 MAP3K2Q9Y2U5 619 aa11.64□□□□□ -0.55
DHFR-202ENST00000504396 MED23Q9ULK4 1368 aa11.64□□□□□ -0.55
DHFR-202ENST00000504396 MYH3P11055 1940 aa11.64□□□□□ -0.55
DHFR-202ENST00000504396 MYO3BQ8WXR4 1341 aa11.63□□□□□ -0.55
DHFR-202ENST00000504396 TRIM6-TRIM34B2RNG4 842 aa11.63□□□□□ -0.55
DHFR-202ENST00000504396 ZNF853P0CG23 659 aa11.63□□□□□ -0.55
DHFR-202ENST00000504396 MMP14P50281 582 aa11.63□□□□□ -0.55
DHFR-202ENST00000504396 GNAI1P63096 354 aa11.63□□□□□ -0.55
DHFR-202ENST00000504396 NEXNQ0ZGT2 675 aa11.63□□□□□ -0.55
DHFR-202ENST00000504396 ARMC9Q7Z3E5 817 aa11.63□□□□□ -0.55
DHFR-202ENST00000504396 GMLQ99445 158 aa11.63□□□□□ -0.55
DHFR-202ENST00000504396 IFT57Q9NWB7 429 aa11.63□□□□□ -0.55
DHFR-202ENST00000504396 WTIPA6NIX2 430 aaPredicted RBP11.62□□□□□ -0.55
DHFR-202ENST00000504396 GPR25O00155 361 aa11.62□□□□□ -0.55
DHFR-202ENST00000504396 WNT10BO00744 389 aa11.62□□□□□ -0.55
DHFR-202ENST00000504396 IGHMBP2P38935 993 aaKnown RBP11.62□□□□□ -0.55
DHFR-202ENST00000504396 KCNJ4P48050 445 aa11.62□□□□□ -0.55
DHFR-202ENST00000504396 CCT4P50991 539 aaKnown RBP11.62□□□□□ -0.55
DHFR-202ENST00000504396 CCDC30Q5VVM6 783 aa11.62□□□□□ -0.55
DHFR-202ENST00000504396 KIAA0825Q8IV33 1275 aa11.62□□□□□ -0.55
DHFR-202ENST00000504396 GREM2Q9H772 168 aa11.62□□□□□ -0.55
DHFR-202ENST00000504396 PDE4DIPQ5VU43 2346 aa11.61□□□□□ -0.55
DHFR-202ENST00000504396 APAF1O14727 1248 aa11.61□□□□□ -0.55
DHFR-202ENST00000504396 FKTNO75072 461 aa11.61□□□□□ -0.55
DHFR-202ENST00000504396 DACT2Q5SW24 774 aa11.61□□□□□ -0.55
DHFR-202ENST00000504396 FBXO46Q6PJ61 603 aaPredicted RBP11.61□□□□□ -0.55
DHFR-202ENST00000504396 APOBEC3FQ8IUX4 373 aaKnown RBP11.61□□□□□ -0.55
DHFR-202ENST00000504396 BSDC1Q9NW68 430 aaPredicted RBP11.61□□□□□ -0.55
DHFR-202ENST00000504396 ANGEL1Q9UNK9 670 aaKnown RBP11.61□□□□□ -0.55
DHFR-202ENST00000504396 MINPP1Q9UNW1 487 aa11.61□□□□□ -0.55
DHFR-202ENST00000504396 PTPN12Q05209 780 aaKnown RBP11.6□□□□□ -0.55
DHFR-202ENST00000504396 STRIP1Q5VSL9 837 aa11.6□□□□□ -0.55
DHFR-202ENST00000504396 TTLL5Q6EMB2 1281 aa11.6□□□□□ -0.55
DHFR-202ENST00000504396 C8orf58Q8NAV2 365 aa11.6□□□□□ -0.55
DHFR-202ENST00000504396 TTLL11Q8NHH1 800 aa11.6□□□□□ -0.55
DHFR-202ENST00000504396 MPHOSPH8Q99549 860 aa11.6□□□□□ -0.55
DHFR-202ENST00000504396 STK31Q9BXU1 1019 aa11.6□□□□□ -0.55
DHFR-202ENST00000504396 COA1Q9GZY4 146 aa11.6□□□□□ -0.55
DHFR-202ENST00000504396 ZNF646O15015 1829 aaPredicted RBP11.6□□□□□ -0.55
DHFR-202ENST00000504396 PI4KAP2A4QPH2 592 aa11.6□□□□□ -0.55
DHFR-202ENST00000504396 GOLGA8CPA6NN73 597 aa11.6□□□□□ -0.55
DHFR-202ENST00000504396 TM4SF4P48230 202 aa11.6□□□□□ -0.55
DHFR-202ENST00000504396 CWF19L2Q2TBE0 894 aaKnown RBP11.6□□□□□ -0.55
DHFR-202ENST00000504396 UBE3BQ7Z3V4 1068 aa11.6□□□□□ -0.55
DHFR-202ENST00000504396 PI4KAP1Q8N8J0 262 aa11.6□□□□□ -0.55
DHFR-202ENST00000504396 FZD1Q9UP38 647 aa11.6□□□□□ -0.55
DHFR-202ENST00000504396 ZNF804BA4D1E1 1349 aa11.59□□□□□ -0.55
DHFR-202ENST00000504396 IGKV5-2P06315 115 aa11.59□□□□□ -0.55
DHFR-202ENST00000504396 KLRK1P26718 216 aa11.59□□□□□ -0.55
DHFR-202ENST00000504396 GTF2IP78347 998 aa11.59□□□□□ -0.55
DHFR-202ENST00000504396 NOM1Q5C9Z4 860 aaKnown RBP11.59□□□□□ -0.55
DHFR-202ENST00000504396 KSR2Q6VAB6 950 aa11.59□□□□□ -0.55
DHFR-202ENST00000504396 TXNRD3Q86VQ6 643 aa11.59□□□□□ -0.55
DHFR-202ENST00000504396 CDCA7LQ96GN5 454 aa11.59□□□□□ -0.55
DHFR-202ENST00000504396 SEPT9Q9UHD8 586 aaPredicted RBP11.59□□□□□ -0.55
DHFR-202ENST00000504396 TRIM17Q9Y577 477 aa11.59□□□□□ -0.55
DHFR-202ENST00000504396 F8W031 263 aaPredicted RBP11.58□□□□□ -0.56
DHFR-202ENST00000504396 ALDH1A1P00352 501 aa11.58□□□□□ -0.56
DHFR-202ENST00000504396 ITGA6P23229 1130 aa11.58□□□□□ -0.56
DHFR-202ENST00000504396 PRSS12P56730 875 aa11.58□□□□□ -0.56
DHFR-202ENST00000504396 DLGAP5Q15398 846 aa11.58□□□□□ -0.56
DHFR-202ENST00000504396 SPRYD7Q5W111 196 aa11.58□□□□□ -0.56
DHFR-202ENST00000504396 TSPYL6Q8N831 410 aa11.58□□□□□ -0.56
DHFR-202ENST00000504396 SLC10A4Q96EP9 437 aa11.58□□□□□ -0.56
DHFR-202ENST00000504396 ANKRD2Q9GZV1 360 aa11.58□□□□□ -0.56
DHFR-202ENST00000504396 R3HDMLQ9H3Y0 253 aa11.58□□□□□ -0.56
DHFR-202ENST00000504396 LEMD3Q9Y2U8 911 aa11.58□□□□□ -0.56
DHFR-202ENST00000504396 COL1A1P02452 1464 aaPredicted RBP11.57□□□□□ -0.56
DHFR-202ENST00000504396 CACNA1FO60840 1977 aa11.57□□□□□ -0.56
DHFR-202ENST00000504396 MANSC4A6NHS7 340 aaPredicted RBP11.57□□□□□ -0.56
DHFR-202ENST00000504396 NEURL1BA8MQ27 555 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms