RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 IFFO2Q5TF58 517 aa11.52□□□□□ -0.57
COL1A1-210ENST00000504289 TTLL5Q6EMB2 1281 aa11.52□□□□□ -0.57
COL1A1-210ENST00000504289 GAS2L3Q86XJ1 694 aa11.52□□□□□ -0.57
COL1A1-210ENST00000504289 TMTC2Q8N394 836 aa11.52□□□□□ -0.57
COL1A1-210ENST00000504289 RNF41Q9H4P4 317 aaPredicted RBP11.52□□□□□ -0.57
COL1A1-210ENST00000504289 TMEM63CQ9P1W3 806 aa11.52□□□□□ -0.57
COL1A1-210ENST00000504289 WWC3Q9ULE0 1092 aa11.52□□□□□ -0.57
COL1A1-210ENST00000504289 A0A1B0GUL6 1792 aa11.51□□□□□ -0.57
COL1A1-210ENST00000504289 TCHHQ07283 1943 aa11.51□□□□□ -0.57
COL1A1-210ENST00000504289 APOBRQ0VD83 1088 aa11.51□□□□□ -0.57
COL1A1-210ENST00000504289 STK3Q13188 491 aa11.51□□□□□ -0.57
COL1A1-210ENST00000504289 COL9A3Q14050 684 aaPredicted RBP11.51□□□□□ -0.57
COL1A1-210ENST00000504289 PPP2R5BQ15173 497 aa11.51□□□□□ -0.57
COL1A1-210ENST00000504289 CPLX2Q6PUV4 134 aaKnown RBP11.51□□□□□ -0.57
COL1A1-210ENST00000504289 C15orf52Q6ZUT6 534 aaKnown RBP11.51□□□□□ -0.57
COL1A1-210ENST00000504289 SGMS1Q86VZ5 419 aa11.51□□□□□ -0.57
COL1A1-210ENST00000504289 IFNL3Q8IZI9 196 aa11.51□□□□□ -0.57
COL1A1-210ENST00000504289 MAGEB6Q8N7X4 407 aa11.51□□□□□ -0.57
COL1A1-210ENST00000504289 NAPBQ9H115 298 aa11.51□□□□□ -0.57
COL1A1-210ENST00000504289 LRP2BPQ9P2M1 347 aa11.51□□□□□ -0.57
COL1A1-210ENST00000504289 ANAPC4Q9UJX5 808 aa11.51□□□□□ -0.57
COL1A1-210ENST00000504289 ANGEL1Q9UNK9 670 aaKnown RBP11.51□□□□□ -0.57
COL1A1-210ENST00000504289 CNPY2Q9Y2B0 182 aa11.51□□□□□ -0.57
COL1A1-210ENST00000504289 LEMD3Q9Y2U8 911 aa11.51□□□□□ -0.57
COL1A1-210ENST00000504289 TIAM2Q8IVF5 1701 aa11.5□□□□□ -0.57
COL1A1-210ENST00000504289 PTPDC1A2A3K4 754 aa11.5□□□□□ -0.57
COL1A1-210ENST00000504289 GSG1L2A8MUP6 293 aa11.5□□□□□ -0.57
COL1A1-210ENST00000504289 MBD4O95243 580 aa11.5□□□□□ -0.57
COL1A1-210ENST00000504289 APPP05067 770 aa11.5□□□□□ -0.57
COL1A1-210ENST00000504289 NASPP49321 788 aaPredicted RBP11.5□□□□□ -0.57
COL1A1-210ENST00000504289 DNM1Q05193 864 aaKnown RBP11.5□□□□□ -0.57
COL1A1-210ENST00000504289 CCDC173Q0VFZ6 552 aa11.5□□□□□ -0.57
COL1A1-210ENST00000504289 RESTQ13127 1097 aa11.5□□□□□ -0.57
COL1A1-210ENST00000504289 SPTY2D1Q68D10 685 aaPredicted RBP11.5□□□□□ -0.57
COL1A1-210ENST00000504289 CDC37L1Q7L3B6 337 aa11.5□□□□□ -0.57
COL1A1-210ENST00000504289 VPS37DQ86XT2 251 aa11.5□□□□□ -0.57
COL1A1-210ENST00000504289 STAG1Q8WVM7 1258 aa11.5□□□□□ -0.57
COL1A1-210ENST00000504289 FAM84BQ96KN1 310 aaPredicted RBP11.5□□□□□ -0.57
COL1A1-210ENST00000504289 PPP1R9BQ96SB3 815 aa11.5□□□□□ -0.57
COL1A1-210ENST00000504289 NID2Q14112 1375 aa11.5□□□□□ -0.57
COL1A1-210ENST00000504289 SH2B2O14492 632 aaPredicted RBP11.49□□□□□ -0.57
COL1A1-210ENST00000504289 JAK2O60674 1132 aa11.49□□□□□ -0.57
COL1A1-210ENST00000504289 CTDNEP1O95476 244 aa11.49□□□□□ -0.57
COL1A1-210ENST00000504289 TM4SF1P30408 202 aa11.49□□□□□ -0.57
COL1A1-210ENST00000504289 HIBADHP31937 336 aaKnown RBP11.49□□□□□ -0.57
COL1A1-210ENST00000504289 ANTXR2P58335 489 aa11.49□□□□□ -0.57
COL1A1-210ENST00000504289 SART3Q15020 963 aaKnown RBP11.49□□□□□ -0.57
COL1A1-210ENST00000504289 UVSSAQ2YD98 709 aa11.49□□□□□ -0.57
COL1A1-210ENST00000504289 AKNAD1Q5T1N1 836 aa11.49□□□□□ -0.57
COL1A1-210ENST00000504289 C3orf67Q6ZVT6 689 aa11.49□□□□□ -0.57
COL1A1-210ENST00000504289 PTF1AQ7RTS3 328 aa11.49□□□□□ -0.57
COL1A1-210ENST00000504289 TMC4Q7Z404 712 aa11.49□□□□□ -0.57
COL1A1-210ENST00000504289 CERS3Q8IU89 383 aa11.49□□□□□ -0.57
COL1A1-210ENST00000504289 CELF1Q92879 486 aaKnown RBP11.49□□□□□ -0.57
COL1A1-210ENST00000504289 ZNF396Q96N95 335 aaPredicted RBP11.49□□□□□ -0.57
COL1A1-210ENST00000504289 BRIP1Q9BX63 1249 aa11.49□□□□□ -0.57
COL1A1-210ENST00000504289 NBPF3Q9H094 633 aa11.49□□□□□ -0.57
COL1A1-210ENST00000504289 QTRT2Q9H974 415 aaKnown RBP11.49□□□□□ -0.57
COL1A1-210ENST00000504289 SRP68Q9UHB9 627 aaKnown RBP11.49□□□□□ -0.57
COL1A1-210ENST00000504289 KLF18A0A0U1RQI7 1052 aa11.48□□□□□ -0.57
COL1A1-210ENST00000504289 CPLX1O14810 134 aa11.48□□□□□ -0.57
COL1A1-210ENST00000504289 FIBPO43427 364 aa11.48□□□□□ -0.57
COL1A1-210ENST00000504289 GADD45BO75293 160 aaPredicted RBP11.48□□□□□ -0.57
COL1A1-210ENST00000504289 CYP7A1P22680 504 aa11.48□□□□□ -0.57
COL1A1-210ENST00000504289 HAND2P61296 217 aa11.48□□□□□ -0.57
COL1A1-210ENST00000504289 GRAPQ13588 217 aa11.48□□□□□ -0.57
COL1A1-210ENST00000504289 HS1BP3Q53T59 392 aa11.48□□□□□ -0.57
COL1A1-210ENST00000504289 BICDL1Q6ZP65 573 aa11.48□□□□□ -0.57
COL1A1-210ENST00000504289 MFSD6Q6ZSS7 791 aa11.48□□□□□ -0.57
COL1A1-210ENST00000504289 FAM43AQ8N2R8 423 aa11.48□□□□□ -0.57
COL1A1-210ENST00000504289 CNBD1Q8NA66 436 aa11.48□□□□□ -0.57
COL1A1-210ENST00000504289 GRAPLQ8TC17 118 aaPredicted RBP11.48□□□□□ -0.57
COL1A1-210ENST00000504289 SPATA32Q96LK8 384 aa11.48□□□□□ -0.57
COL1A1-210ENST00000504289 LRRC2Q9BYS8 371 aa11.48□□□□□ -0.57
COL1A1-210ENST00000504289 TSPY26PQ9H489 355 aa11.48□□□□□ -0.57
COL1A1-210ENST00000504289 BRPF3Q9ULD4 1205 aa11.48□□□□□ -0.57
COL1A1-210ENST00000504289 C4AP0C0L4 1744 aa11.48□□□□□ -0.57
COL1A1-210ENST00000504289 CASZ1Q86V15 1759 aa11.48□□□□□ -0.57
COL1A1-210ENST00000504289 MYO5AQ9Y4I1 1855 aaKnown RBP11.48□□□□□ -0.57
COL1A1-210ENST00000504289 DUOX1Q9NRD9 1551 aa11.47□□□□□ -0.57
COL1A1-210ENST00000504289 MAGEB6P1A0A0J9YX57 407 aa11.47□□□□□ -0.57
COL1A1-210ENST00000504289 GOLGA6L4A6NEF3 574 aa11.47□□□□□ -0.57
COL1A1-210ENST00000504289 GOLGA8BA8MQT2 603 aa11.47□□□□□ -0.57
COL1A1-210ENST00000504289 NFIXQ14938 502 aa11.47□□□□□ -0.57
COL1A1-210ENST00000504289 CRY2Q49AN0 593 aa11.47□□□□□ -0.57
COL1A1-210ENST00000504289 ZNF772Q68DY9 489 aaPredicted RBP11.47□□□□□ -0.57
COL1A1-210ENST00000504289 SYNE3Q6ZMZ3 975 aa11.47□□□□□ -0.57
COL1A1-210ENST00000504289 BRAPQ7Z569 592 aa11.47□□□□□ -0.57
COL1A1-210ENST00000504289 TBC1D10CQ8IV04 446 aa11.47□□□□□ -0.57
COL1A1-210ENST00000504289 IGDCC4Q8TDY8 1250 aa11.47□□□□□ -0.57
COL1A1-210ENST00000504289 ARMT1Q9H993 441 aa11.47□□□□□ -0.57
COL1A1-210ENST00000504289 EPB41L4AQ9HCS5 686 aaPredicted RBP11.47□□□□□ -0.57
COL1A1-210ENST00000504289 DDX19AQ9NUU7 478 aaKnown RBP11.47□□□□□ -0.57
COL1A1-210ENST00000504289 RAI14Q9P0K7 980 aa11.47□□□□□ -0.57
COL1A1-210ENST00000504289 RCOR1Q9UKL0 485 aa11.47□□□□□ -0.57
COL1A1-210ENST00000504289 NSFL1CQ9UNZ2 370 aaKnown RBP11.47□□□□□ -0.57
COL1A1-210ENST00000504289 HPS5Q9UPZ3 1129 aa11.47□□□□□ -0.57
COL1A1-210ENST00000504289 SLC4A4Q9Y6R1 1079 aa11.47□□□□□ -0.57
COL1A1-210ENST00000504289 XDHP47989 1333 aa11.46□□□□□ -0.57
COL1A1-210ENST00000504289 STK36Q9NRP7 1315 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms