RNA–Protein interactions for RNA: ENST00000504233.5

PAPD4-207, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

TSL 1 (best) BASIC

Gene PAPD4, Length 2,997 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-207ENST00000504233 TDRD7Q8NHU6 1098 aaKnown RBP13.16□□□□□ -0.3
PAPD4-207ENST00000504233 PIH1D3Q9NQM4 214 aaKnown RBP13.16□□□□□ -0.3
PAPD4-207ENST00000504233 SPTLC3Q9NUV7 552 aa13.16□□□□□ -0.3
PAPD4-207ENST00000504233 PCDHA7Q9UN72 937 aa13.16□□□□□ -0.3
PAPD4-207ENST00000504233 MAP3K15Q6ZN16 1313 aa13.16□□□□□ -0.3
PAPD4-207ENST00000504233 CSF1RP07333 972 aa13.15□□□□□ -0.3
PAPD4-207ENST00000504233 PHKA1P46020 1223 aa13.15□□□□□ -0.3
PAPD4-207ENST00000504233 ARID5BQ14865 1188 aa13.15□□□□□ -0.3
PAPD4-207ENST00000504233 SF3A1Q15459 793 aaKnown RBP13.15□□□□□ -0.3
PAPD4-207ENST00000504233 CCDC144BQ3MJ40 725 aa13.15□□□□□ -0.3
PAPD4-207ENST00000504233 MB21D2Q8IYB1 491 aaPredicted RBP13.15□□□□□ -0.3
PAPD4-207ENST00000504233 CLIP2Q9UDT6 1046 aa13.15□□□□□ -0.3
PAPD4-207ENST00000504233 HPS5Q9UPZ3 1129 aa13.15□□□□□ -0.3
PAPD4-207ENST00000504233 RIPOR2Q9Y4F9 1068 aa13.15□□□□□ -0.3
PAPD4-207ENST00000504233 RIC1Q4ADV7 1423 aa13.15□□□□□ -0.3
PAPD4-207ENST00000504233 SENP2Q9HC62 589 aa13.15□□□□□ -0.3
PAPD4-207ENST00000504233 ZFYP08048 801 aaPredicted RBP13.14□□□□□ -0.31
PAPD4-207ENST00000504233 CTSWP56202 376 aa13.14□□□□□ -0.31
PAPD4-207ENST00000504233 STK38Q15208 465 aa13.14□□□□□ -0.31
PAPD4-207ENST00000504233 LRRFIP1Q32MZ4 808 aaKnown RBP13.14□□□□□ -0.31
PAPD4-207ENST00000504233 TBC1D10CQ8IV04 446 aa13.14□□□□□ -0.31
PAPD4-207ENST00000504233 NCOA7Q8NI08 942 aa13.14□□□□□ -0.31
PAPD4-207ENST00000504233 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.14□□□□□ -0.31
PAPD4-207ENST00000504233 SDF4Q9BRK5 362 aa13.14□□□□□ -0.31
PAPD4-207ENST00000504233 ANKRD18BA2A2Z9 1011 aa13.14□□□□□ -0.31
PAPD4-207ENST00000504233 BECN2A8MW95 431 aa13.14□□□□□ -0.31
PAPD4-207ENST00000504233 UTP14CQ5TAP6 766 aaKnown RBP13.14□□□□□ -0.31
PAPD4-207ENST00000504233 PLA2G4DQ86XP0 818 aa13.14□□□□□ -0.31
PAPD4-207ENST00000504233 MYL10Q9BUA6 226 aa13.14□□□□□ -0.31
PAPD4-207ENST00000504233 NBPF3Q9H094 633 aa13.14□□□□□ -0.31
PAPD4-207ENST00000504233 TRMT1Q9NXH9 659 aaKnown RBP13.14□□□□□ -0.31
PAPD4-207ENST00000504233 WWC3Q9ULE0 1092 aa13.14□□□□□ -0.31
PAPD4-207ENST00000504233 NWD2Q9ULI1 1742 aa13.14□□□□□ -0.31
PAPD4-207ENST00000504233 TOGARAM1Q9Y4F4 1720 aa13.14□□□□□ -0.31
PAPD4-207ENST00000504233 KIF28PB7ZC32 967 aa13.14□□□□□ -0.31
PAPD4-207ENST00000504233 BIN1O00499 593 aa13.14□□□□□ -0.31
PAPD4-207ENST00000504233 NDUFA8P51970 172 aa13.14□□□□□ -0.31
PAPD4-207ENST00000504233 FAM160A1Q05DH4 1040 aa13.14□□□□□ -0.31
PAPD4-207ENST00000504233 TRIM28Q13263 835 aaKnown RBP13.14□□□□□ -0.31
PAPD4-207ENST00000504233 IQCB1Q15051 598 aa13.14□□□□□ -0.31
PAPD4-207ENST00000504233 XIRP1Q702N8 1843 aaKnown RBP13.13□□□□□ -0.31
PAPD4-207ENST00000504233 B4E1Z4 1266 aa13.13□□□□□ -0.31
PAPD4-207ENST00000504233 STX1AQ16623 288 aa13.13□□□□□ -0.31
PAPD4-207ENST00000504233 CYB5R4Q7L1T6 521 aa13.13□□□□□ -0.31
PAPD4-207ENST00000504233 PHKBQ93100 1093 aa13.13□□□□□ -0.31
PAPD4-207ENST00000504233 ZNF532Q9HCE3 1301 aa13.13□□□□□ -0.31
PAPD4-207ENST00000504233 PLEKHG2Q9H7P9 1386 aa13.13□□□□□ -0.31
PAPD4-207ENST00000504233 UBE2Q2LH0YL09 131 aa13.13□□□□□ -0.31
PAPD4-207ENST00000504233 MARCKSP29966 332 aaPredicted RBP13.13□□□□□ -0.31
PAPD4-207ENST00000504233 SKIDA1Q1XH10 827 aa13.13□□□□□ -0.31
PAPD4-207ENST00000504233 ISM2Q6H9L7 571 aa13.13□□□□□ -0.31
PAPD4-207ENST00000504233 ZSCAN25Q6NSZ9 544 aa13.13□□□□□ -0.31
PAPD4-207ENST00000504233 MICU3Q86XE3 530 aa13.13□□□□□ -0.31
PAPD4-207ENST00000504233 ENGASEQ8NFI3 743 aa13.13□□□□□ -0.31
PAPD4-207ENST00000504233 CACTINQ8WUQ7 758 aaKnown RBP13.13□□□□□ -0.31
PAPD4-207ENST00000504233 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.13□□□□□ -0.31
PAPD4-207ENST00000504233 SHANK3Q9BYB0 1731 aa13.13□□□□□ -0.31
PAPD4-207ENST00000504233 ADD2P35612 726 aa13.12□□□□□ -0.31
PAPD4-207ENST00000504233 TRDNQ13061 729 aa13.12□□□□□ -0.31
PAPD4-207ENST00000504233 CCDC102BQ68D86 513 aa13.12□□□□□ -0.31
PAPD4-207ENST00000504233 FILIP1Q7Z7B0 1213 aa13.12□□□□□ -0.31
PAPD4-207ENST00000504233 AOPEPQ8N6M6 819 aa13.12□□□□□ -0.31
PAPD4-207ENST00000504233 MRPS27Q92552 414 aaKnown RBP13.12□□□□□ -0.31
PAPD4-207ENST00000504233 CYP19A1P11511 503 aaPredicted RBP13.12□□□□□ -0.31
PAPD4-207ENST00000504233 PLA2G12BQ9BX93 195 aa13.12□□□□□ -0.31
PAPD4-207ENST00000504233 GTPBP4Q9BZE4 634 aaKnown RBP13.12□□□□□ -0.31
PAPD4-207ENST00000504233 TPM3P06753 285 aa13.11□□□□□ -0.31
PAPD4-207ENST00000504233 PAPPAQ13219 1627 aa13.11□□□□□ -0.31
PAPD4-207ENST00000504233 DZIP3Q86Y13 1208 aaKnown RBP13.11□□□□□ -0.31
PAPD4-207ENST00000504233 LINC00301Q8NCQ3 95 aa13.11□□□□□ -0.31
PAPD4-207ENST00000504233 FBXO18Q8NFZ0 1043 aa13.11□□□□□ -0.31
PAPD4-207ENST00000504233 TEX13AQ9BXU3 409 aaPredicted RBP13.11□□□□□ -0.31
PAPD4-207ENST00000504233 MYO5AQ9Y4I1 1855 aaKnown RBP13.11□□□□□ -0.31
PAPD4-207ENST00000504233 UBN2Q6ZU65 1347 aa13.11□□□□□ -0.31
PAPD4-207ENST00000504233 PRIMPOLQ96LW4 560 aa13.11□□□□□ -0.31
PAPD4-207ENST00000504233 KIF20AO95235 890 aa13.11□□□□□ -0.31
PAPD4-207ENST00000504233 PDE8BO95263 885 aa13.11□□□□□ -0.31
PAPD4-207ENST00000504233 PDE6AP16499 860 aa13.11□□□□□ -0.31
PAPD4-207ENST00000504233 CTDSPL2Q05D32 466 aa13.11□□□□□ -0.31
PAPD4-207ENST00000504233 MYSM1Q5VVJ2 828 aa13.11□□□□□ -0.31
PAPD4-207ENST00000504233 FMR1NBQ8N0W7 255 aaPredicted RBP13.11□□□□□ -0.31
PAPD4-207ENST00000504233 RTEL1Q9NZ71 1219 aa13.11□□□□□ -0.31
PAPD4-207ENST00000504233 POLR3GO15318 223 aaPredicted RBP13.1□□□□□ -0.31
PAPD4-207ENST00000504233 CTAGE5O15320 804 aa13.1□□□□□ -0.31
PAPD4-207ENST00000504233 DHX16O60231 1041 aaKnown RBP13.1□□□□□ -0.31
PAPD4-207ENST00000504233 SYNE3Q6ZMZ3 975 aa13.1□□□□□ -0.31
PAPD4-207ENST00000504233 NFXL1Q6ZNB6 911 aa13.1□□□□□ -0.31
PAPD4-207ENST00000504233 DHX40Q8IX18 779 aaKnown RBP13.1□□□□□ -0.31
PAPD4-207ENST00000504233 VGLL2Q8N8G2 317 aa13.1□□□□□ -0.31
PAPD4-207ENST00000504233 SEC31BQ9NQW1 1179 aa13.1□□□□□ -0.31
PAPD4-207ENST00000504233 FBXO3Q9UK99 471 aa13.1□□□□□ -0.31
PAPD4-207ENST00000504233 MYH15Q9Y2K3 1946 aa13.1□□□□□ -0.31
PAPD4-207ENST00000504233 NEDD4P46934 1319 aa13.1□□□□□ -0.31
PAPD4-207ENST00000504233 SPTLC2O15270 562 aa13.1□□□□□ -0.31
PAPD4-207ENST00000504233 CDC27P30260 824 aa13.1□□□□□ -0.31
PAPD4-207ENST00000504233 METAP2P50579 478 aaKnown RBP eCLIP13.1□□□□□ -0.31
PAPD4-207ENST00000504233 EVCP57679 992 aa13.1□□□□□ -0.31
PAPD4-207ENST00000504233 NCBP1Q09161 790 aaKnown RBP13.1□□□□□ -0.31
PAPD4-207ENST00000504233 DPCR1Q3MIW9 517 aa13.1□□□□□ -0.31
PAPD4-207ENST00000504233 RRP12Q5JTH9 1297 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms