RNA–Protein interactions for RNA: ENST00000504012.1

LINC01340-201, Transcript of long intergenic non-protein coding RNA 1340, humanhuman

TSL 3 BASIC

Gene LINC01340, Length 724 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01340-201ENST00000504012 SUGT1Q9Y2Z0 365 aa6.81□□□□□ -1.32
LINC01340-201ENST00000504012 PCDHGA4Q9Y5G9 962 aa6.81□□□□□ -1.32
LINC01340-201ENST00000504012 KIAA0232Q92628 1395 aa6.81□□□□□ -1.32
LINC01340-201ENST00000504012 URB2Q14146 1524 aaKnown RBP6.81□□□□□ -1.32
LINC01340-201ENST00000504012 SALL3Q9BXA9 1300 aa6.8□□□□□ -1.32
LINC01340-201ENST00000504012 ERVK-7P63135 1459 aa6.8□□□□□ -1.32
LINC01340-201ENST00000504012 MYO3AQ8NEV4 1616 aa6.8□□□□□ -1.32
LINC01340-201ENST00000504012 TARSL2A2RTX5 802 aaKnown RBP6.8□□□□□ -1.32
LINC01340-201ENST00000504012 VWA3AA6NCI4 1184 aa6.8□□□□□ -1.32
LINC01340-201ENST00000504012 ABLIM1O14639 778 aa6.8□□□□□ -1.32
LINC01340-201ENST00000504012 IKBKBO14920 756 aa6.8□□□□□ -1.32
LINC01340-201ENST00000504012 STX10O60499 249 aa6.8□□□□□ -1.32
LINC01340-201ENST00000504012 VAMP4O75379 141 aa6.8□□□□□ -1.32
LINC01340-201ENST00000504012 SYF2O95926 243 aaKnown RBP6.8□□□□□ -1.32
LINC01340-201ENST00000504012 EPB41P11171 864 aaKnown RBP6.8□□□□□ -1.32
LINC01340-201ENST00000504012 FERP16591 822 aa6.8□□□□□ -1.32
LINC01340-201ENST00000504012 GJB2P29033 226 aa6.8□□□□□ -1.32
LINC01340-201ENST00000504012 ABCD1P33897 745 aa6.8□□□□□ -1.32
LINC01340-201ENST00000504012 GCLCP48506 637 aaPredicted RBP6.8□□□□□ -1.32
LINC01340-201ENST00000504012 CCT5P48643 541 aa6.8□□□□□ -1.32
LINC01340-201ENST00000504012 CCDC40Q4G0X9 1142 aa6.8□□□□□ -1.32
LINC01340-201ENST00000504012 CRELD2Q6UXH1 353 aaPredicted RBP6.8□□□□□ -1.32
LINC01340-201ENST00000504012 CKAP2LQ8IYA6 745 aa6.8□□□□□ -1.32
LINC01340-201ENST00000504012 C1orf131Q8NDD1 294 aaKnown RBP6.8□□□□□ -1.32
LINC01340-201ENST00000504012 CCHCR1Q8TD31 782 aa6.8□□□□□ -1.32
LINC01340-201ENST00000504012 SMARCC1Q92922 1105 aaPredicted RBP6.8□□□□□ -1.32
LINC01340-201ENST00000504012 TSR2Q969E8 191 aaKnown RBP6.8□□□□□ -1.32
LINC01340-201ENST00000504012 CCDC102AQ96A19 550 aa6.8□□□□□ -1.32
LINC01340-201ENST00000504012 CCDC47Q96A33 483 aaKnown RBP6.8□□□□□ -1.32
LINC01340-201ENST00000504012 KIFC2Q96AC6 838 aa6.8□□□□□ -1.32
LINC01340-201ENST00000504012 ABCB6Q9NP58 842 aa6.8□□□□□ -1.32
LINC01340-201ENST00000504012 RGL1Q9NZL6 768 aa6.8□□□□□ -1.32
LINC01340-201ENST00000504012 MAGEC2Q9UBF1 373 aaPredicted RBP6.8□□□□□ -1.32
LINC01340-201ENST00000504012 DDX20Q9UHI6 824 aaKnown RBP6.8□□□□□ -1.32
LINC01340-201ENST00000504012 CFAP45Q9UL16 551 aa6.8□□□□□ -1.32
LINC01340-201ENST00000504012 PALD1Q9ULE6 856 aa6.8□□□□□ -1.32
LINC01340-201ENST00000504012 ARIH1Q9Y4X5 557 aaPredicted RBP6.8□□□□□ -1.32
LINC01340-201ENST00000504012 TUBGCP6Q96RT7 1819 aa6.8□□□□□ -1.32
LINC01340-201ENST00000504012 EVC2Q86UK5 1308 aa6.79□□□□□ -1.32
LINC01340-201ENST00000504012 CD109Q6YHK3 1445 aa6.79□□□□□ -1.32
LINC01340-201ENST00000504012 ATP10DQ9P241 1426 aa6.79□□□□□ -1.32
LINC01340-201ENST00000504012 GOLGA8KD6RF30 607 aa6.79□□□□□ -1.32
LINC01340-201ENST00000504012 TCF3P15923 654 aa6.79□□□□□ -1.32
LINC01340-201ENST00000504012 ROR2Q01974 943 aaKnown RBP6.79□□□□□ -1.32
LINC01340-201ENST00000504012 SFSWAPQ12872 951 aaKnown RBP6.79□□□□□ -1.32
LINC01340-201ENST00000504012 RIPK1Q13546 671 aa6.79□□□□□ -1.32
LINC01340-201ENST00000504012 MYBPC2Q14324 1141 aa6.79□□□□□ -1.32
LINC01340-201ENST00000504012 CAMK4Q16566 473 aa6.79□□□□□ -1.32
LINC01340-201ENST00000504012 KIAA0753Q2KHM9 967 aa6.79□□□□□ -1.32
LINC01340-201ENST00000504012 TSR1Q2NL82 804 aaKnown RBP6.79□□□□□ -1.32
LINC01340-201ENST00000504012 CCDC181Q5TID7 509 aa6.79□□□□□ -1.32
LINC01340-201ENST00000504012 CWF19L1Q69YN2 538 aaKnown RBP6.79□□□□□ -1.32
LINC01340-201ENST00000504012 RUFY3Q7L099 469 aa6.79□□□□□ -1.32
LINC01340-201ENST00000504012 CCAR1Q8IX12 1150 aaKnown RBP6.79□□□□□ -1.32
LINC01340-201ENST00000504012 PARP9Q8IXQ6 854 aa6.79□□□□□ -1.32
LINC01340-201ENST00000504012 C16orf71Q8IYS4 520 aaPredicted RBP6.79□□□□□ -1.32
LINC01340-201ENST00000504012 TRIM58Q8NG06 486 aa6.79□□□□□ -1.32
LINC01340-201ENST00000504012 MIPOL1Q8TD10 442 aa6.79□□□□□ -1.32
LINC01340-201ENST00000504012 MORC4Q8TE76 937 aa6.79□□□□□ -1.32
LINC01340-201ENST00000504012 RPGRIP1Q96KN7 1286 aa6.79□□□□□ -1.32
LINC01340-201ENST00000504012 CLIC6Q96NY7 704 aa6.79□□□□□ -1.32
LINC01340-201ENST00000504012 CAPS2Q9BXY5 557 aa6.79□□□□□ -1.32
LINC01340-201ENST00000504012 RCOR1Q9UKL0 485 aa6.79□□□□□ -1.32
LINC01340-201ENST00000504012 PPP2R2CQ9Y2T4 447 aa6.79□□□□□ -1.32
LINC01340-201ENST00000504012 MAST1Q9Y2H9 1570 aa6.78□□□□□ -1.32
LINC01340-201ENST00000504012 CHD2O14647 1828 aaKnown RBP6.78□□□□□ -1.32
LINC01340-201ENST00000504012 ZC3H13Q5T200 1668 aaKnown RBP6.78□□□□□ -1.32
LINC01340-201ENST00000504012 GOLGA6L10A6NI86 522 aa6.78□□□□□ -1.32
LINC01340-201ENST00000504012 MGRN1O60291 552 aa6.78□□□□□ -1.32
LINC01340-201ENST00000504012 OPA1O60313 960 aa6.78□□□□□ -1.32
LINC01340-201ENST00000504012 N4BP1O75113 896 aaKnown RBP6.78□□□□□ -1.32
LINC01340-201ENST00000504012 FAM163BP0C2L3 166 aa6.78□□□□□ -1.32
LINC01340-201ENST00000504012 MTHFSP49914 203 aa6.78□□□□□ -1.32
LINC01340-201ENST00000504012 RBM5P52756 815 aaKnown RBP eCLIP6.78□□□□□ -1.32
LINC01340-201ENST00000504012 AK2P54819 239 aa6.78□□□□□ -1.32
LINC01340-201ENST00000504012 GNG11P61952 73 aa6.78□□□□□ -1.32
LINC01340-201ENST00000504012 PSMD2Q13200 908 aa6.78□□□□□ -1.32
LINC01340-201ENST00000504012 TMED1Q13445 227 aa6.78□□□□□ -1.32
LINC01340-201ENST00000504012 ANKRD1Q15327 319 aa6.78□□□□□ -1.32
LINC01340-201ENST00000504012 FOXD4L6Q3SYB3 417 aaPredicted RBP6.78□□□□□ -1.32
LINC01340-201ENST00000504012 LACTB2Q53H82 288 aaPredicted RBP6.78□□□□□ -1.32
LINC01340-201ENST00000504012 HSP90AB2PQ58FF8 381 aa6.78□□□□□ -1.32
LINC01340-201ENST00000504012 LARP1BQ659C4 914 aaKnown RBP6.78□□□□□ -1.32
LINC01340-201ENST00000504012 CAPRIN2Q6IMN6 1127 aaKnown RBP6.78□□□□□ -1.32
LINC01340-201ENST00000504012 CEP85Q6P2H3 762 aa6.78□□□□□ -1.32
LINC01340-201ENST00000504012 MTHFD1LQ6UB35 978 aa6.78□□□□□ -1.32
LINC01340-201ENST00000504012 FOXD4L3Q6VB84 417 aaPredicted RBP6.78□□□□□ -1.32
LINC01340-201ENST00000504012 C11orf57Q6ZUT1 292 aaPredicted RBP6.78□□□□□ -1.32
LINC01340-201ENST00000504012 UBE3BQ7Z3V4 1068 aa6.78□□□□□ -1.32
LINC01340-201ENST00000504012 TMC6Q7Z403 805 aa6.78□□□□□ -1.32
LINC01340-201ENST00000504012 IGSF22Q8N9C0 903 aa6.78□□□□□ -1.32
LINC01340-201ENST00000504012 BCAS4Q8TDM0 211 aa6.78□□□□□ -1.32
LINC01340-201ENST00000504012 LMBR1Q8WVP7 490 aa6.78□□□□□ -1.32
LINC01340-201ENST00000504012 SREK1Q8WXA9 508 aaKnown RBP6.78□□□□□ -1.32
LINC01340-201ENST00000504012 BICD1Q96G01 975 aa6.78□□□□□ -1.32
LINC01340-201ENST00000504012 JAKMIP1Q96N16 626 aaKnown RBP6.78□□□□□ -1.32
LINC01340-201ENST00000504012 C8orf37Q96NL8 207 aa6.78□□□□□ -1.32
LINC01340-201ENST00000504012 ALS2CR12Q96Q35 445 aa6.78□□□□□ -1.32
LINC01340-201ENST00000504012 UPF3BQ9BZI7 483 aaKnown RBP6.78□□□□□ -1.32
LINC01340-201ENST00000504012 EBF2Q9HAK2 575 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms