RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 SHISA4Q96DD7 197 aa3.33□□□□□ -1.88
NEDD4-204ENST00000503468 HDAC5Q9UQL6 1122 aa3.33□□□□□ -1.88
NEDD4-204ENST00000503468 MUC22E2RYF6 1773 aaPredicted RBP3.32□□□□□ -1.88
NEDD4-204ENST00000503468 SSR1P43307 286 aaKnown RBP3.32□□□□□ -1.88
NEDD4-204ENST00000503468 NOL9Q5SY16 702 aaKnown RBP3.32□□□□□ -1.88
NEDD4-204ENST00000503468 MNS1Q8NEH6 495 aa3.32□□□□□ -1.88
NEDD4-204ENST00000503468 BPIFA3Q9BQP9 254 aa3.32□□□□□ -1.88
NEDD4-204ENST00000503468 GNL3Q9BVP2 549 aaKnown RBP eCLIP3.32□□□□□ -1.88
NEDD4-204ENST00000503468 GEMIN8Q9NWZ8 242 aaKnown RBP3.32□□□□□ -1.88
NEDD4-204ENST00000503468 CLDN10P78369 228 aa3.32□□□□□ -1.88
NEDD4-204ENST00000503468 MAPK8IP2Q13387 824 aaPredicted RBP3.32□□□□□ -1.88
NEDD4-204ENST00000503468 UNC5CLQ8IV45 518 aa3.32□□□□□ -1.88
NEDD4-204ENST00000503468 TSPYL6Q8N831 410 aa3.32□□□□□ -1.88
NEDD4-204ENST00000503468 PITPNM2Q9BZ72 1349 aa3.32□□□□□ -1.88
NEDD4-204ENST00000503468 RPL34P49207 117 aaKnown RBP3.32□□□□□ -1.88
NEDD4-204ENST00000503468 SLC35G1Q2M3R5 365 aa3.32□□□□□ -1.88
NEDD4-204ENST00000503468 SARM1Q6SZW1 724 aa3.32□□□□□ -1.88
NEDD4-204ENST00000503468 ZNF771Q7L3S4 317 aaPredicted RBP3.32□□□□□ -1.88
NEDD4-204ENST00000503468 HAUS7Q99871 368 aa3.32□□□□□ -1.88
NEDD4-204ENST00000503468 TANC1Q9C0D5 1861 aa3.32□□□□□ -1.88
NEDD4-204ENST00000503468 COL6A1P12109 1028 aa3.32□□□□□ -1.88
NEDD4-204ENST00000503468 RIPK4P57078 832 aa3.32□□□□□ -1.88
NEDD4-204ENST00000503468 ITIH3Q06033 890 aa3.32□□□□□ -1.88
NEDD4-204ENST00000503468 FIGNQ5HY92 759 aa3.32□□□□□ -1.88
NEDD4-204ENST00000503468 EIF1ADQ8N9N8 165 aaKnown RBP3.32□□□□□ -1.88
NEDD4-204ENST00000503468 SEC14L1Q92503 715 aa3.32□□□□□ -1.88
NEDD4-204ENST00000503468 MRM3Q9HC36 420 aaKnown RBP3.32□□□□□ -1.88
NEDD4-204ENST00000503468 PLXNA3P51805 1871 aa3.32□□□□□ -1.88
NEDD4-204ENST00000503468 TNKSO95271 1327 aa3.32□□□□□ -1.88
NEDD4-204ENST00000503468 ALPK3Q96L96 1907 aa3.32□□□□□ -1.88
NEDD4-204ENST00000503468 APPP05067 770 aa3.32□□□□□ -1.88
NEDD4-204ENST00000503468 SH3D19Q5HYK7 790 aa3.32□□□□□ -1.88
NEDD4-204ENST00000503468 ZMYM1Q5SVZ6 1142 aa3.32□□□□□ -1.88
NEDD4-204ENST00000503468 LLPHQ9BRT6 129 aaKnown RBP3.32□□□□□ -1.88
NEDD4-204ENST00000503468 USP26Q9BXU7 913 aa3.32□□□□□ -1.88
NEDD4-204ENST00000503468 CGNQ9P2M7 1197 aaKnown RBP3.32□□□□□ -1.88
NEDD4-204ENST00000503468 KNSTRNQ9Y448 316 aa3.32□□□□□ -1.88
NEDD4-204ENST00000503468 ATP6V1DQ9Y5K8 247 aa3.32□□□□□ -1.88
NEDD4-204ENST00000503468 NFASCO94856 1347 aa3.32□□□□□ -1.88
NEDD4-204ENST00000503468 BNIPLQ7Z465 357 aa3.31□□□□□ -1.88
NEDD4-204ENST00000503468 KRT222Q8N1A0 295 aa3.31□□□□□ -1.88
NEDD4-204ENST00000503468 BRIP1Q9BX63 1249 aa3.31□□□□□ -1.88
NEDD4-204ENST00000503468 C22orf23Q9BZE7 217 aa3.31□□□□□ -1.88
NEDD4-204ENST00000503468 MKNK2Q9HBH9 465 aa3.31□□□□□ -1.88
NEDD4-204ENST00000503468 CNTN6Q9UQ52 1028 aa3.31□□□□□ -1.88
NEDD4-204ENST00000503468 NEMFO60524 1076 aa3.31□□□□□ -1.88
NEDD4-204ENST00000503468 TUBBP07437 444 aa3.31□□□□□ -1.88
NEDD4-204ENST00000503468 BCRP11274 1271 aa3.31□□□□□ -1.88
NEDD4-204ENST00000503468 RHBDL3P58872 404 aa3.31□□□□□ -1.88
NEDD4-204ENST00000503468 TUBB4BP68371 445 aa3.31□□□□□ -1.88
NEDD4-204ENST00000503468 C4orf32Q8N8J7 132 aa3.31□□□□□ -1.88
NEDD4-204ENST00000503468 TMX1Q9H3N1 280 aa3.31□□□□□ -1.88
NEDD4-204ENST00000503468 ARGLU1Q9NWB6 273 aaPredicted RBP3.31□□□□□ -1.88
NEDD4-204ENST00000503468 NCANO14594 1321 aa3.31□□□□□ -1.88
NEDD4-204ENST00000503468 PIK3CDO00329 1044 aa3.31□□□□□ -1.88
NEDD4-204ENST00000503468 TPM4P67936 248 aa3.31□□□□□ -1.88
NEDD4-204ENST00000503468 TTLL11Q8NHH1 800 aa3.31□□□□□ -1.88
NEDD4-204ENST00000503468 DEF6Q9H4E7 631 aa3.31□□□□□ -1.88
NEDD4-204ENST00000503468 MYH7BA7E2Y1 1941 aa3.31□□□□□ -1.88
NEDD4-204ENST00000503468 A0A1W2PQ27 194 aa3.31□□□□□ -1.88
NEDD4-204ENST00000503468 A0A1W2PQ64 194 aa3.31□□□□□ -1.88
NEDD4-204ENST00000503468 A0A1W2PQD8 194 aa3.31□□□□□ -1.88
NEDD4-204ENST00000503468 RBM47A0AV96 593 aaKnown RBP3.31□□□□□ -1.88
NEDD4-204ENST00000503468 GNAI3P08754 354 aa3.31□□□□□ -1.88
NEDD4-204ENST00000503468 SETQ01105 290 aaPredicted RBP3.31□□□□□ -1.88
NEDD4-204ENST00000503468 UBE4AQ14139 1066 aa3.31□□□□□ -1.88
NEDD4-204ENST00000503468 PIBF1Q8WXW3 757 aa3.31□□□□□ -1.88
NEDD4-204ENST00000503468 USP25Q9UHP3 1055 aa3.31□□□□□ -1.88
NEDD4-204ENST00000503468 MROH7-TTC4A0A0A0MT08 1334 aa3.31□□□□□ -1.88
NEDD4-204ENST00000503468 UBASH3AP57075 661 aa3.31□□□□□ -1.88
NEDD4-204ENST00000503468 SF3B2Q13435 895 aaKnown RBP3.31□□□□□ -1.88
NEDD4-204ENST00000503468 REPS2Q8NFH8 660 aa3.31□□□□□ -1.88
NEDD4-204ENST00000503468 ZNF830Q96NB3 372 aaPredicted RBP3.31□□□□□ -1.88
NEDD4-204ENST00000503468 CRBNQ96SW2 442 aa3.31□□□□□ -1.88
NEDD4-204ENST00000503468 NCAPGQ9BPX3 1015 aa3.31□□□□□ -1.88
NEDD4-204ENST00000503468 IL25Q9H293 177 aa3.31□□□□□ -1.88
NEDD4-204ENST00000503468 ANKFY1Q9P2R3 1169 aa3.31□□□□□ -1.88
NEDD4-204ENST00000503468 MYH6P13533 1939 aa3.3□□□□□ -1.88
NEDD4-204ENST00000503468 GNAT3A8MTJ3 354 aa3.3□□□□□ -1.88
NEDD4-204ENST00000503468 ATP8B1O43520 1251 aa3.3□□□□□ -1.88
NEDD4-204ENST00000503468 TDO2P48775 406 aa3.3□□□□□ -1.88
NEDD4-204ENST00000503468 TROAPQ12815 778 aa3.3□□□□□ -1.88
NEDD4-204ENST00000503468 MYBPC2Q14324 1141 aa3.3□□□□□ -1.88
NEDD4-204ENST00000503468 AEBP1Q8IUX7 1158 aa3.3□□□□□ -1.88
NEDD4-204ENST00000503468 C12orf56Q8IXR9 622 aa3.3□□□□□ -1.88
NEDD4-204ENST00000503468 ZNF579Q8NAF0 562 aaKnown RBP3.3□□□□□ -1.88
NEDD4-204ENST00000503468 CYP3A7-CYP3A51PA0A087WV96 503 aa3.3□□□□□ -1.88
NEDD4-204ENST00000503468 CYP3A7P24462 503 aa3.3□□□□□ -1.88
NEDD4-204ENST00000503468 FLIIQ13045 1269 aa3.3□□□□□ -1.88
NEDD4-204ENST00000503468 RAB3GAP1Q15042 981 aa3.3□□□□□ -1.88
NEDD4-204ENST00000503468 SLFNL1Q499Z3 407 aa3.3□□□□□ -1.88
NEDD4-204ENST00000503468 NBPF11Q86T75 865 aa3.3□□□□□ -1.88
NEDD4-204ENST00000503468 MB21D2Q8IYB1 491 aaPredicted RBP3.3□□□□□ -1.88
NEDD4-204ENST00000503468 NGDNQ8NEJ9 315 aaKnown RBP3.3□□□□□ -1.88
NEDD4-204ENST00000503468 NUTM1Q86Y26 1132 aa3.3□□□□□ -1.88
NEDD4-204ENST00000503468 PAXBP1Q9Y5B6 917 aa3.3□□□□□ -1.88
NEDD4-204ENST00000503468 MYH8P13535 1937 aa3.3□□□□□ -1.88
NEDD4-204ENST00000503468 EDNRBP24530 442 aa3.3□□□□□ -1.88
NEDD4-204ENST00000503468 BMT2Q1RMZ1 405 aa3.3□□□□□ -1.88
NEDD4-204ENST00000503468 ZCWPW2Q504Y3 356 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms