RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 CT47B1P0C2W7 299 aaPredicted RBP7.69□□□□□ -1.18
LSM3P4-201ENST00000502948 NBPF7P0C2Y1 421 aaPredicted RBP7.69□□□□□ -1.18
LSM3P4-201ENST00000502948 CRKP46108 304 aa7.69□□□□□ -1.18
LSM3P4-201ENST00000502948 GTF2A2P52657 109 aa7.69□□□□□ -1.18
LSM3P4-201ENST00000502948 ALDH1L2Q3SY69 923 aa7.69□□□□□ -1.18
LSM3P4-201ENST00000502948 CAVIN4Q5BKX8 364 aa7.69□□□□□ -1.18
LSM3P4-201ENST00000502948 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.69□□□□□ -1.18
LSM3P4-201ENST00000502948 OTOP1Q7RTM1 612 aa7.69□□□□□ -1.18
LSM3P4-201ENST00000502948 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.69□□□□□ -1.18
LSM3P4-201ENST00000502948 ZNF594Q96JF6 807 aaPredicted RBP7.69□□□□□ -1.18
LSM3P4-201ENST00000502948 CLMNQ96JQ2 1002 aa7.69□□□□□ -1.18
LSM3P4-201ENST00000502948 ZDHHC15Q96MV8 337 aa7.69□□□□□ -1.18
LSM3P4-201ENST00000502948 R3HDMLQ9H3Y0 253 aa7.69□□□□□ -1.18
LSM3P4-201ENST00000502948 PTPN22Q9Y2R2 807 aa7.69□□□□□ -1.18
LSM3P4-201ENST00000502948 CHMP3Q9Y3E7 222 aa7.69□□□□□ -1.18
LSM3P4-201ENST00000502948 CLRN2A0PK11 232 aa7.68□□□□□ -1.18
LSM3P4-201ENST00000502948 SPDYE5A6NIY4 337 aa7.68□□□□□ -1.18
LSM3P4-201ENST00000502948 F8W031 263 aaPredicted RBP7.68□□□□□ -1.18
LSM3P4-201ENST00000502948 FGFR2P21802 821 aa7.68□□□□□ -1.18
LSM3P4-201ENST00000502948 GJA5P36382 358 aa7.68□□□□□ -1.18
LSM3P4-201ENST00000502948 GYG1P46976 350 aa7.68□□□□□ -1.18
LSM3P4-201ENST00000502948 RBM5P52756 815 aaKnown RBP eCLIP7.68□□□□□ -1.18
LSM3P4-201ENST00000502948 MAP3K9P80192 1104 aa7.68□□□□□ -1.18
LSM3P4-201ENST00000502948 SP3Q02447 781 aa7.68□□□□□ -1.18
LSM3P4-201ENST00000502948 CRHR2Q13324 411 aa7.68□□□□□ -1.18
LSM3P4-201ENST00000502948 PRKG1Q13976 671 aa7.68□□□□□ -1.18
LSM3P4-201ENST00000502948 MRPL50Q8N5N7 158 aaKnown RBP7.68□□□□□ -1.18
LSM3P4-201ENST00000502948 TEKT1Q969V4 418 aa7.68□□□□□ -1.18
LSM3P4-201ENST00000502948 OPTNQ96CV9 577 aa7.68□□□□□ -1.18
LSM3P4-201ENST00000502948 SUCLG2Q96I99 432 aa7.68□□□□□ -1.18
LSM3P4-201ENST00000502948 PTPN18Q99952 460 aa7.68□□□□□ -1.18
LSM3P4-201ENST00000502948 VEZTQ9HBM0 779 aa7.68□□□□□ -1.18
LSM3P4-201ENST00000502948 TRIM17Q9Y577 477 aa7.68□□□□□ -1.18
LSM3P4-201ENST00000502948 PCDHAC2Q9Y5I4 1007 aa7.68□□□□□ -1.18
LSM3P4-201ENST00000502948 HTTP42858 3142 aa7.68□□□□□ -1.18
LSM3P4-201ENST00000502948 ZNF316A6NFI3 1004 aaPredicted RBP7.67□□□□□ -1.18
LSM3P4-201ENST00000502948 E9PSI1 815 aa7.67□□□□□ -1.18
LSM3P4-201ENST00000502948 WDHD1O75717 1129 aaPredicted RBP7.67□□□□□ -1.18
LSM3P4-201ENST00000502948 CAPN2P17655 700 aa7.67□□□□□ -1.18
LSM3P4-201ENST00000502948 PRMT2P55345 433 aa7.67□□□□□ -1.18
LSM3P4-201ENST00000502948 MKRN3Q13064 507 aaKnown RBP7.67□□□□□ -1.18
LSM3P4-201ENST00000502948 PUM3Q15397 648 aaKnown RBP7.67□□□□□ -1.18
LSM3P4-201ENST00000502948 SLC4A10Q6U841 1118 aa7.67□□□□□ -1.18
LSM3P4-201ENST00000502948 VPS37DQ86XT2 251 aa7.67□□□□□ -1.18
LSM3P4-201ENST00000502948 ERO1BQ86YB8 467 aa7.67□□□□□ -1.18
LSM3P4-201ENST00000502948 ANKRD44Q8N8A2 993 aa7.67□□□□□ -1.18
LSM3P4-201ENST00000502948 WDR66Q8TBY9 1149 aa7.67□□□□□ -1.18
LSM3P4-201ENST00000502948 PUS3Q9BZE2 481 aaKnown RBP7.67□□□□□ -1.18
LSM3P4-201ENST00000502948 USP44Q9H0E7 712 aa7.67□□□□□ -1.18
LSM3P4-201ENST00000502948 BICC1Q9H694 974 aaKnown RBP7.67□□□□□ -1.18
LSM3P4-201ENST00000502948 TDRD3Q9H7E2 651 aaKnown RBP7.67□□□□□ -1.18
LSM3P4-201ENST00000502948 ZFYVE28Q9HCC9 887 aa7.67□□□□□ -1.18
LSM3P4-201ENST00000502948 HDAC5Q9UQL6 1122 aa7.67□□□□□ -1.18
LSM3P4-201ENST00000502948 CSADQ9Y600 493 aa7.67□□□□□ -1.18
LSM3P4-201ENST00000502948 AOX1Q06278 1338 aa7.67□□□□□ -1.18
LSM3P4-201ENST00000502948 SALL1Q9NSC2 1324 aa7.67□□□□□ -1.18
LSM3P4-201ENST00000502948 SEMA3EO15041 775 aa7.66□□□□□ -1.18
LSM3P4-201ENST00000502948 TLR2O60603 784 aa7.66□□□□□ -1.18
LSM3P4-201ENST00000502948 CIAO1O76071 339 aa7.66□□□□□ -1.18
LSM3P4-201ENST00000502948 IFIT1P09914 478 aaKnown RBP7.66□□□□□ -1.18
LSM3P4-201ENST00000502948 CETPP11597 493 aa7.66□□□□□ -1.18
LSM3P4-201ENST00000502948 RFX5P48382 616 aaPredicted RBP7.66□□□□□ -1.18
LSM3P4-201ENST00000502948 PPATQ06203 517 aa7.66□□□□□ -1.18
LSM3P4-201ENST00000502948 PPIL2Q13356 520 aa7.66□□□□□ -1.18
LSM3P4-201ENST00000502948 VGLL4Q14135 290 aa7.66□□□□□ -1.18
LSM3P4-201ENST00000502948 METTL24Q5JXM2 366 aa7.66□□□□□ -1.18
LSM3P4-201ENST00000502948 DCAF15Q66K64 600 aa7.66□□□□□ -1.18
LSM3P4-201ENST00000502948 APOBEC3HQ6NTF7 200 aaKnown RBP7.66□□□□□ -1.18
LSM3P4-201ENST00000502948 NBPF11Q86T75 865 aa7.66□□□□□ -1.18
LSM3P4-201ENST00000502948 TRMT2AQ8IZ69 625 aaKnown RBP7.66□□□□□ -1.18
LSM3P4-201ENST00000502948 BRI3BPQ8WY22 251 aa7.66□□□□□ -1.18
LSM3P4-201ENST00000502948 LPIN2Q92539 896 aa7.66□□□□□ -1.18
LSM3P4-201ENST00000502948 EFCC1Q9HA90 598 aa7.66□□□□□ -1.18
LSM3P4-201ENST00000502948 TMOD2Q9NZR1 351 aa7.66□□□□□ -1.18
LSM3P4-201ENST00000502948 FZD1Q9UP38 647 aa7.66□□□□□ -1.18
LSM3P4-201ENST00000502948 PDS5AQ29RF7 1337 aaKnown RBP7.66□□□□□ -1.18
LSM3P4-201ENST00000502948 CCL15-CCL14A0A0B4J2E2 113 aa7.65□□□□□ -1.18
LSM3P4-201ENST00000502948 EYA2O00167 538 aa7.65□□□□□ -1.18
LSM3P4-201ENST00000502948 PLIN1O60240 522 aa7.65□□□□□ -1.18
LSM3P4-201ENST00000502948 CENPFP49454 3210 aa7.65□□□□□ -1.18
LSM3P4-201ENST00000502948 CCL15Q16663 113 aa7.65□□□□□ -1.18
LSM3P4-201ENST00000502948 LRRC24Q50LG9 513 aa7.65□□□□□ -1.18
LSM3P4-201ENST00000502948 DOCK2Q92608 1830 aa7.65□□□□□ -1.18
LSM3P4-201ENST00000502948 ZNF333Q96JL9 665 aa7.65□□□□□ -1.18
LSM3P4-201ENST00000502948 TMEM39BQ9GZU3 492 aa7.65□□□□□ -1.18
LSM3P4-201ENST00000502948 ELP3Q9H9T3 547 aa7.65□□□□□ -1.18
LSM3P4-201ENST00000502948 ZNF112Q9UJU3 913 aa7.65□□□□□ -1.18
LSM3P4-201ENST00000502948 BRCA2P51587 3418 aa7.65□□□□□ -1.19
LSM3P4-201ENST00000502948 KIAA0100Q14667 2235 aaKnown RBP7.64□□□□□ -1.19
LSM3P4-201ENST00000502948 MYH2Q9UKX2 1941 aa7.64□□□□□ -1.19
LSM3P4-201ENST00000502948 MGAMO43451 1857 aa7.64□□□□□ -1.19
LSM3P4-201ENST00000502948 TCP10L2B9ZVM9 353 aa7.64□□□□□ -1.19
LSM3P4-201ENST00000502948 IGSF3O75054 1194 aa7.64□□□□□ -1.19
LSM3P4-201ENST00000502948 SLC5A1P13866 664 aa7.64□□□□□ -1.19
LSM3P4-201ENST00000502948 BCAMP50895 628 aa7.64□□□□□ -1.19
LSM3P4-201ENST00000502948 MAP3K10Q02779 954 aa7.64□□□□□ -1.19
LSM3P4-201ENST00000502948 SLFN5Q08AF3 891 aa7.64□□□□□ -1.19
LSM3P4-201ENST00000502948 SNAPC2Q13487 334 aa7.64□□□□□ -1.19
LSM3P4-201ENST00000502948 TAF1CQ15572 869 aaPredicted RBP7.64□□□□□ -1.19
LSM3P4-201ENST00000502948 NOL9Q5SY16 702 aaKnown RBP7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms