RNA–Protein interactions for RNA: ENST00000502453.1

SUB1-202, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 4,273 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-202ENST00000502453 FAM8A1Q9UBU6 413 aa4.54□□□□□ -1.68
SUB1-202ENST00000502453 LRFN2Q9ULH4 789 aa4.54□□□□□ -1.68
SUB1-202ENST00000502453 HCN4Q9Y3Q4 1203 aa4.54□□□□□ -1.68
SUB1-202ENST00000502453 POTEB3A0JP26 581 aa4.53□□□□□ -1.68
SUB1-202ENST00000502453 FBXO24O75426 580 aa4.53□□□□□ -1.68
SUB1-202ENST00000502453 RENBPP51606 427 aa4.53□□□□□ -1.68
SUB1-202ENST00000502453 HLTFQ14527 1009 aaKnown RBP eCLIP4.53□□□□□ -1.68
SUB1-202ENST00000502453 CCDC85BQ15834 202 aaPredicted RBP4.53□□□□□ -1.68
SUB1-202ENST00000502453 TM4SF20Q53R12 229 aa4.53□□□□□ -1.68
SUB1-202ENST00000502453 FAM102BQ5T8I3 360 aa4.53□□□□□ -1.68
SUB1-202ENST00000502453 LMBRD2Q68DH5 695 aaPredicted RBP4.53□□□□□ -1.68
SUB1-202ENST00000502453 NBPF10Q6P3W6 841 aaKnown RBP4.53□□□□□ -1.68
SUB1-202ENST00000502453 POTEBQ6S5H4 581 aa4.53□□□□□ -1.68
SUB1-202ENST00000502453 STRA8Q7Z7C7 330 aa4.53□□□□□ -1.68
SUB1-202ENST00000502453 PASD1Q8IV76 773 aa4.53□□□□□ -1.68
SUB1-202ENST00000502453 MAGEB6Q8N7X4 407 aa4.53□□□□□ -1.68
SUB1-202ENST00000502453 ABTB2Q8N961 1025 aa4.53□□□□□ -1.68
SUB1-202ENST00000502453 SLC45A1Q9Y2W3 748 aa4.53□□□□□ -1.68
SUB1-202ENST00000502453 A6NJY4 79 aa4.53□□□□□ -1.68
SUB1-202ENST00000502453 APAF1O14727 1248 aa4.53□□□□□ -1.68
SUB1-202ENST00000502453 TDO2P48775 406 aa4.53□□□□□ -1.68
SUB1-202ENST00000502453 SARSP49591 514 aaKnown RBP4.53□□□□□ -1.68
SUB1-202ENST00000502453 ZBED6P86452 979 aa4.53□□□□□ -1.68
SUB1-202ENST00000502453 RNF19BQ6ZMZ0 732 aa4.53□□□□□ -1.68
SUB1-202ENST00000502453 MMS22LQ6ZRQ5 1243 aa4.53□□□□□ -1.68
SUB1-202ENST00000502453 PLCB1Q9NQ66 1216 aa4.53□□□□□ -1.68
SUB1-202ENST00000502453 SMC4Q9NTJ3 1288 aa4.53□□□□□ -1.68
SUB1-202ENST00000502453 SLC27A5Q9Y2P5 690 aa4.53□□□□□ -1.68
SUB1-202ENST00000502453 SLC4A7Q9Y6M7 1214 aa4.53□□□□□ -1.68
SUB1-202ENST00000502453 A0A087X0B3 334 aa4.53□□□□□ -1.68
SUB1-202ENST00000502453 BICDL2A1A5D9 508 aa4.53□□□□□ -1.68
SUB1-202ENST00000502453 B2RBV5 119 aa4.53□□□□□ -1.68
SUB1-202ENST00000502453 PRRT4C9JH25 899 aa4.53□□□□□ -1.68
SUB1-202ENST00000502453 IGHDP01880 384 aa4.53□□□□□ -1.68
SUB1-202ENST00000502453 LMNB1P20700 586 aa4.53□□□□□ -1.68
SUB1-202ENST00000502453 MCM4P33991 863 aa4.53□□□□□ -1.68
SUB1-202ENST00000502453 CALD1Q05682 793 aaKnown RBP4.53□□□□□ -1.68
SUB1-202ENST00000502453 LHFPL2Q6ZUX7 228 aa4.53□□□□□ -1.68
SUB1-202ENST00000502453 CRBNQ96SW2 442 aa4.53□□□□□ -1.68
SUB1-202ENST00000502453 OBP2AQ9NY56 170 aa4.53□□□□□ -1.68
SUB1-202ENST00000502453 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.53□□□□□ -1.68
SUB1-202ENST00000502453 IPPQ9Y573 584 aa4.53□□□□□ -1.68
SUB1-202ENST00000502453 PDGFAP04085 211 aa4.52□□□□□ -1.69
SUB1-202ENST00000502453 SOX9P48436 509 aa4.52□□□□□ -1.69
SUB1-202ENST00000502453 TNNI3KQ59H18 835 aa4.52□□□□□ -1.69
SUB1-202ENST00000502453 DESI1Q6ICB0 168 aa4.52□□□□□ -1.69
SUB1-202ENST00000502453 WDR66Q8TBY9 1149 aa4.52□□□□□ -1.69
SUB1-202ENST00000502453 USP33Q8TEY7 942 aa4.52□□□□□ -1.69
SUB1-202ENST00000502453 SLC5A4Q9NY91 659 aa4.52□□□□□ -1.69
SUB1-202ENST00000502453 KIAA1468Q9P260 1216 aa4.52□□□□□ -1.69
SUB1-202ENST00000502453 SNX2O60749 519 aa4.52□□□□□ -1.69
SUB1-202ENST00000502453 CPNE3O75131 537 aaKnown RBP4.52□□□□□ -1.69
SUB1-202ENST00000502453 TNFRSF21O75509 655 aa4.52□□□□□ -1.69
SUB1-202ENST00000502453 GRM1Q13255 1194 aa4.52□□□□□ -1.69
SUB1-202ENST00000502453 NUDT16Q96DE0 195 aaKnown RBP4.52□□□□□ -1.69
SUB1-202ENST00000502453 SHDQ96IW2 340 aa4.52□□□□□ -1.69
SUB1-202ENST00000502453 FBRSQ9HAH7 460 aa4.52□□□□□ -1.69
SUB1-202ENST00000502453 RHOBTB3O94955 611 aa4.52□□□□□ -1.69
SUB1-202ENST00000502453 F12P00748 615 aaPredicted RBP4.52□□□□□ -1.69
SUB1-202ENST00000502453 ZAP70P43403 619 aa4.52□□□□□ -1.69
SUB1-202ENST00000502453 NEXNQ0ZGT2 675 aa4.52□□□□□ -1.69
SUB1-202ENST00000502453 DOK7Q18PE1 504 aa4.52□□□□□ -1.69
SUB1-202ENST00000502453 C1orf53Q5VUE5 145 aa4.52□□□□□ -1.69
SUB1-202ENST00000502453 PDXDC2PQ6P474 469 aa4.52□□□□□ -1.69
SUB1-202ENST00000502453 FBXL19Q6PCT2 694 aa4.52□□□□□ -1.69
SUB1-202ENST00000502453 RSRC2Q7L4I2 434 aaKnown RBP4.52□□□□□ -1.69
SUB1-202ENST00000502453 NINJ1Q92982 152 aa4.52□□□□□ -1.69
SUB1-202ENST00000502453 CCDC34Q96HJ3 373 aa4.52□□□□□ -1.69
SUB1-202ENST00000502453 FERD3LQ96RJ6 166 aa4.52□□□□□ -1.69
SUB1-202ENST00000502453 MRGBPQ9NV56 204 aa4.52□□□□□ -1.69
SUB1-202ENST00000502453 A6NCN8 305 aa4.52□□□□□ -1.69
SUB1-202ENST00000502453 F5H423 210 aaPredicted RBP4.52□□□□□ -1.69
SUB1-202ENST00000502453 TLR3O15455 904 aaKnown RBP4.52□□□□□ -1.69
SUB1-202ENST00000502453 GJB6O95452 261 aa4.52□□□□□ -1.69
SUB1-202ENST00000502453 MAPK9P45984 424 aa4.52□□□□□ -1.69
SUB1-202ENST00000502453 AGERQ15109 404 aa4.52□□□□□ -1.69
SUB1-202ENST00000502453 PJA1Q8NG27 643 aa4.52□□□□□ -1.69
SUB1-202ENST00000502453 ATRIPQ8WXE1 791 aa4.52□□□□□ -1.69
SUB1-202ENST00000502453 C2orf49Q9BVC5 232 aaPredicted RBP4.52□□□□□ -1.69
SUB1-202ENST00000502453 TNKS2Q9H2K2 1166 aa4.52□□□□□ -1.69
SUB1-202ENST00000502453 TSR3Q9UJK0 312 aaKnown RBP4.52□□□□□ -1.69
SUB1-202ENST00000502453 SYNPO2Q9UMS6 1093 aa4.52□□□□□ -1.69
SUB1-202ENST00000502453 DMTF1Q9Y222 760 aa4.52□□□□□ -1.69
SUB1-202ENST00000502453 LUC7L2Q9Y383 392 aaKnown RBP4.52□□□□□ -1.69
SUB1-202ENST00000502453 RAPGEF3O95398 923 aa4.51□□□□□ -1.69
SUB1-202ENST00000502453 SEZ6Q53EL9 994 aa4.51□□□□□ -1.69
SUB1-202ENST00000502453 JAKMIP3Q5VZ66 844 aa4.51□□□□□ -1.69
SUB1-202ENST00000502453 PCNX4Q63HM2 1172 aa4.51□□□□□ -1.69
SUB1-202ENST00000502453 RNF180Q86T96 592 aa4.51□□□□□ -1.69
SUB1-202ENST00000502453 TCEAL8Q8IYN2 117 aa4.51□□□□□ -1.69
SUB1-202ENST00000502453 COG1Q8WTW3 980 aa4.51□□□□□ -1.69
SUB1-202ENST00000502453 CCDC74AQ96AQ1 378 aa4.51□□□□□ -1.69
SUB1-202ENST00000502453 ELAC2Q9BQ52 826 aaKnown RBP4.51□□□□□ -1.69
SUB1-202ENST00000502453 HERPUD2Q9BSE4 406 aa4.51□□□□□ -1.69
SUB1-202ENST00000502453 TARS2Q9BW92 718 aaKnown RBP4.51□□□□□ -1.69
SUB1-202ENST00000502453 ESF1Q9H501 851 aaKnown RBP4.51□□□□□ -1.69
SUB1-202ENST00000502453 ANKIB1Q9P2G1 1089 aa4.51□□□□□ -1.69
SUB1-202ENST00000502453 TLR6Q9Y2C9 796 aa4.51□□□□□ -1.69
SUB1-202ENST00000502453 AKAP2Q9Y2D5 859 aa4.51□□□□□ -1.69
SUB1-202ENST00000502453 ETFBKMTQ8IXQ9 262 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms