RNA–Protein interactions for RNA: ENST00000498698.1

HMGCL-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-207ENST00000498698 NBPF12Q5TAG4 269 aaPredicted RBP11.8□□□□□ -0.52
HMGCL-207ENST00000498698 MRIQ9BWK5 157 aa11.8□□□□□ -0.52
HMGCL-207ENST00000498698 TDRD3Q9H7E2 651 aaKnown RBP11.8□□□□□ -0.52
HMGCL-207ENST00000498698 ANGEL1Q9UNK9 670 aaKnown RBP11.8□□□□□ -0.52
HMGCL-207ENST00000498698 FZD1Q9UP38 647 aa11.8□□□□□ -0.52
HMGCL-207ENST00000498698 COL1A1P02452 1464 aaPredicted RBP11.8□□□□□ -0.52
HMGCL-207ENST00000498698 TRPA1O75762 1119 aa11.79□□□□□ -0.52
HMGCL-207ENST00000498698 SUPT20HL1Q3ZLR7 823 aa11.79□□□□□ -0.52
HMGCL-207ENST00000498698 CLUAP1Q96AJ1 413 aa11.79□□□□□ -0.52
HMGCL-207ENST00000498698 SUGT1Q9Y2Z0 365 aa11.79□□□□□ -0.52
HMGCL-207ENST00000498698 PAPPA2Q9BXP8 1791 aa11.79□□□□□ -0.52
HMGCL-207ENST00000498698 SRGAP3O43295 1099 aa11.78□□□□□ -0.52
HMGCL-207ENST00000498698 TM4SF4P48230 202 aa11.78□□□□□ -0.52
HMGCL-207ENST00000498698 TNFAIP1Q13829 316 aa11.78□□□□□ -0.52
HMGCL-207ENST00000498698 SPRYD7Q5W111 196 aa11.78□□□□□ -0.52
HMGCL-207ENST00000498698 ZKSCAN2Q63HK3 967 aa11.78□□□□□ -0.52
HMGCL-207ENST00000498698 WDR66Q8TBY9 1149 aa11.78□□□□□ -0.52
HMGCL-207ENST00000498698 TEKT1Q969V4 418 aa11.78□□□□□ -0.52
HMGCL-207ENST00000498698 ABHD8Q96I13 439 aa11.78□□□□□ -0.52
HMGCL-207ENST00000498698 ZDHHC15Q96MV8 337 aa11.78□□□□□ -0.52
HMGCL-207ENST00000498698 SSC5DA1L4H1 1573 aa11.78□□□□□ -0.52
HMGCL-207ENST00000498698 POLR2AP24928 1970 aaKnown RBP11.78□□□□□ -0.52
HMGCL-207ENST00000498698 UNCXA6NJT0 531 aa11.77□□□□□ -0.53
HMGCL-207ENST00000498698 ZBTB22O15209 634 aa11.77□□□□□ -0.53
HMGCL-207ENST00000498698 PPP1R12BO60237 982 aaPredicted RBP11.77□□□□□ -0.53
HMGCL-207ENST00000498698 USP2O75604 605 aaPredicted RBP11.77□□□□□ -0.53
HMGCL-207ENST00000498698 GNAI2P04899 355 aa11.77□□□□□ -0.53
HMGCL-207ENST00000498698 ADORA1P30542 326 aa11.77□□□□□ -0.53
HMGCL-207ENST00000498698 APOBEC3HQ6NTF7 200 aaKnown RBP11.77□□□□□ -0.53
HMGCL-207ENST00000498698 CDAN1Q8IWY9 1227 aa11.77□□□□□ -0.53
HMGCL-207ENST00000498698 TMEM57Q8N5G2 664 aa11.77□□□□□ -0.53
HMGCL-207ENST00000498698 SLC10A4Q96EP9 437 aa11.77□□□□□ -0.53
HMGCL-207ENST00000498698 CLMNQ96JQ2 1002 aa11.77□□□□□ -0.53
HMGCL-207ENST00000498698 TEPSINQ96N21 525 aa11.77□□□□□ -0.53
HMGCL-207ENST00000498698 TCP10L2B9ZVM9 353 aa11.76□□□□□ -0.53
HMGCL-207ENST00000498698 PHKA1P46020 1223 aa11.76□□□□□ -0.53
HMGCL-207ENST00000498698 TIMM10P62072 90 aa11.76□□□□□ -0.53
HMGCL-207ENST00000498698 MKRN3Q13064 507 aaKnown RBP11.76□□□□□ -0.53
HMGCL-207ENST00000498698 HHIPL2Q6UWX4 724 aa11.76□□□□□ -0.53
HMGCL-207ENST00000498698 TMEM39BQ9GZU3 492 aa11.76□□□□□ -0.53
HMGCL-207ENST00000498698 GNL3LQ9NVN8 582 aaKnown RBP11.76□□□□□ -0.53
HMGCL-207ENST00000498698 MAST3O60307 1309 aa11.76□□□□□ -0.53
HMGCL-207ENST00000498698 ZBED9Q6R2W3 1325 aa11.76□□□□□ -0.53
HMGCL-207ENST00000498698 A0A1B0GUL6 1792 aa11.76□□□□□ -0.53
HMGCL-207ENST00000498698 PNMA6EA0A0J9YXQ4 647 aa11.75□□□□□ -0.53
HMGCL-207ENST00000498698 SEMA3EO15041 775 aa11.75□□□□□ -0.53
HMGCL-207ENST00000498698 IREB2P48200 963 aaKnown RBP11.75□□□□□ -0.53
HMGCL-207ENST00000498698 TNNI2P48788 182 aa11.75□□□□□ -0.53
HMGCL-207ENST00000498698 CACNB3P54284 484 aa11.75□□□□□ -0.53
HMGCL-207ENST00000498698 TFCP2Q12800 502 aa11.75□□□□□ -0.53
HMGCL-207ENST00000498698 FKBP1CQ5VVH2 108 aa11.75□□□□□ -0.53
HMGCL-207ENST00000498698 CCDC102BQ68D86 513 aa11.75□□□□□ -0.53
HMGCL-207ENST00000498698 MCOLN1Q9GZU1 580 aa11.75□□□□□ -0.53
HMGCL-207ENST00000498698 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.75□□□□□ -0.53
HMGCL-207ENST00000498698 A0A1B0GUL7 405 aa11.74□□□□□ -0.53
HMGCL-207ENST00000498698 RLBP1P12271 317 aa11.74□□□□□ -0.53
HMGCL-207ENST00000498698 PRDX5P30044 214 aa11.74□□□□□ -0.53
HMGCL-207ENST00000498698 SREBF2Q12772 1141 aa11.74□□□□□ -0.53
HMGCL-207ENST00000498698 FAM83AQ86UY5 434 aa11.74□□□□□ -0.53
HMGCL-207ENST00000498698 ANKRD13AQ8IZ07 590 aa11.74□□□□□ -0.53
HMGCL-207ENST00000498698 WNK4Q96J92 1243 aa11.74□□□□□ -0.53
HMGCL-207ENST00000498698 DENND2AQ9ULE3 1009 aa11.74□□□□□ -0.53
HMGCL-207ENST00000498698 AKAP2Q9Y2D5 859 aa11.74□□□□□ -0.53
HMGCL-207ENST00000498698 SALL1Q9NSC2 1324 aa11.74□□□□□ -0.53
HMGCL-207ENST00000498698 MANSC4A6NHS7 340 aaPredicted RBP11.73□□□□□ -0.53
HMGCL-207ENST00000498698 ZBTB7BO15156 539 aaPredicted RBP11.73□□□□□ -0.53
HMGCL-207ENST00000498698 TBC1D8O95759 1140 aa11.73□□□□□ -0.53
HMGCL-207ENST00000498698 LDHBP07195 334 aaKnown RBP11.73□□□□□ -0.53
HMGCL-207ENST00000498698 ZBTB48P10074 688 aaPredicted RBP11.73□□□□□ -0.53
HMGCL-207ENST00000498698 GJA5P36382 358 aa11.73□□□□□ -0.53
HMGCL-207ENST00000498698 INHBEP58166 350 aa11.73□□□□□ -0.53
HMGCL-207ENST00000498698 DGKZQ13574 1117 aa11.73□□□□□ -0.53
HMGCL-207ENST00000498698 RASGRF1Q13972 1273 aa11.73□□□□□ -0.53
HMGCL-207ENST00000498698 POLA2Q14181 598 aa11.73□□□□□ -0.53
HMGCL-207ENST00000498698 DIXDC1Q155Q3 683 aa11.73□□□□□ -0.53
HMGCL-207ENST00000498698 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.73□□□□□ -0.53
HMGCL-207ENST00000498698 XAGE2Q96GT9 111 aa11.73□□□□□ -0.53
HMGCL-207ENST00000498698 CFHR5Q9BXR6 569 aa11.73□□□□□ -0.53
HMGCL-207ENST00000498698 TMOD2Q9NZR1 351 aa11.73□□□□□ -0.53
HMGCL-207ENST00000498698 DAGLAQ9Y4D2 1042 aa11.73□□□□□ -0.53
HMGCL-207ENST00000498698 PDS5AQ29RF7 1337 aaKnown RBP11.72□□□□□ -0.53
HMGCL-207ENST00000498698 ATP8B2P98198 1209 aa11.72□□□□□ -0.53
HMGCL-207ENST00000498698 MVPQ14764 893 aaKnown RBP11.72□□□□□ -0.53
HMGCL-207ENST00000498698 NOM1Q5C9Z4 860 aaKnown RBP11.72□□□□□ -0.53
HMGCL-207ENST00000498698 CDC42EP5Q6NZY7 148 aa11.72□□□□□ -0.53
HMGCL-207ENST00000498698 FTSJ3Q8IY81 847 aaKnown RBP11.72□□□□□ -0.53
HMGCL-207ENST00000498698 SSH3Q8TE77 659 aa11.72□□□□□ -0.53
HMGCL-207ENST00000498698 R3HDMLQ9H3Y0 253 aa11.72□□□□□ -0.53
HMGCL-207ENST00000498698 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.72□□□□□ -0.53
HMGCL-207ENST00000498698 GPR25O00155 361 aa11.71□□□□□ -0.53
HMGCL-207ENST00000498698 MAP3K9P80192 1104 aa11.71□□□□□ -0.53
HMGCL-207ENST00000498698 G3BP1Q13283 466 aaKnown RBP eCLIP11.71□□□□□ -0.53
HMGCL-207ENST00000498698 VGLL4Q14135 290 aa11.71□□□□□ -0.53
HMGCL-207ENST00000498698 IFNL1Q8IU54 200 aa11.71□□□□□ -0.53
HMGCL-207ENST00000498698 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.71□□□□□ -0.53
HMGCL-207ENST00000498698 ZNF296Q8WUU4 475 aaPredicted RBP11.71□□□□□ -0.53
HMGCL-207ENST00000498698 FAM151AQ8WW52 585 aa11.71□□□□□ -0.53
HMGCL-207ENST00000498698 ELP3Q9H9T3 547 aa11.71□□□□□ -0.53
HMGCL-207ENST00000498698 TESPA1A2RU30 521 aaPredicted RBP11.7□□□□□ -0.54
HMGCL-207ENST00000498698 IGF2BP3O00425 579 aaKnown RBP eCLIP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms