RNA–Protein interactions for RNA: ENST00000498689.5

CSTF1-207, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 1 (best)

Gene CSTF1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-207ENST00000498689 TPTE2Q6XPS3 522 aa6.7□□□□□ -1.34
CSTF1-207ENST00000498689 SLC10A4Q96EP9 437 aa6.7□□□□□ -1.34
CSTF1-207ENST00000498689 TRIM47Q96LD4 638 aa6.7□□□□□ -1.34
CSTF1-207ENST00000498689 MFRPQ9BY79 579 aa6.7□□□□□ -1.34
CSTF1-207ENST00000498689 CRISPLD2Q9H0B8 497 aa6.7□□□□□ -1.34
CSTF1-207ENST00000498689 CD320Q9NPF0 282 aa6.7□□□□□ -1.34
CSTF1-207ENST00000498689 SRRDQ9UH36 339 aa6.7□□□□□ -1.34
CSTF1-207ENST00000498689 FRYQ5TBA9 3013 aa6.69□□□□□ -1.34
CSTF1-207ENST00000498689 COL4A6Q14031 1691 aa6.69□□□□□ -1.34
CSTF1-207ENST00000498689 C2orf72A6NCS6 295 aa6.69□□□□□ -1.34
CSTF1-207ENST00000498689 PRR33A8MZF0 331 aa6.69□□□□□ -1.34
CSTF1-207ENST00000498689 NBPF26B4DH59 902 aa6.69□□□□□ -1.34
CSTF1-207ENST00000498689 PI4K2BG5E9Z4 385 aa6.69□□□□□ -1.34
CSTF1-207ENST00000498689 ZZEF1O43149 2961 aa6.69□□□□□ -1.34
CSTF1-207ENST00000498689 A1BGP04217 495 aa6.69□□□□□ -1.34
CSTF1-207ENST00000498689 NUDT7P0C024 238 aa6.69□□□□□ -1.34
CSTF1-207ENST00000498689 OSBPP22059 807 aa6.69□□□□□ -1.34
CSTF1-207ENST00000498689 PDE3AQ14432 1141 aa6.69□□□□□ -1.34
CSTF1-207ENST00000498689 NBPF9Q3BBW0 867 aa6.69□□□□□ -1.34
CSTF1-207ENST00000498689 OTUD7BQ6GQQ9 843 aa6.69□□□□□ -1.34
CSTF1-207ENST00000498689 ERMP1Q7Z2K6 904 aa6.69□□□□□ -1.34
CSTF1-207ENST00000498689 PODNQ7Z5L7 613 aa6.69□□□□□ -1.34
CSTF1-207ENST00000498689 RAET1EQ8TD07 263 aa6.69□□□□□ -1.34
CSTF1-207ENST00000498689 RPGRQ92834 1020 aaKnown RBP6.69□□□□□ -1.34
CSTF1-207ENST00000498689 STAC3Q96MF2 364 aa6.69□□□□□ -1.34
CSTF1-207ENST00000498689 ATP6V0A2Q9Y487 856 aa6.69□□□□□ -1.34
CSTF1-207ENST00000498689 PFASO15067 1338 aa6.69□□□□□ -1.34
CSTF1-207ENST00000498689 WASHC2AQ641Q2 1341 aa6.69□□□□□ -1.34
CSTF1-207ENST00000498689 ZFYVE26Q68DK2 2539 aa6.69□□□□□ -1.34
CSTF1-207ENST00000498689 BPTFQ12830 3046 aa6.68□□□□□ -1.34
CSTF1-207ENST00000498689 RLFQ13129 1914 aa6.68□□□□□ -1.34
CSTF1-207ENST00000498689 SPEGQ15772 3267 aa6.68□□□□□ -1.34
CSTF1-207ENST00000498689 TESPA1A2RU30 521 aaPredicted RBP6.68□□□□□ -1.34
CSTF1-207ENST00000498689 UBXN2AP68543 259 aa6.68□□□□□ -1.34
CSTF1-207ENST00000498689 LSM11P83369 360 aaKnown RBP eCLIP6.68□□□□□ -1.34
CSTF1-207ENST00000498689 DPP8Q6V1X1 898 aaPredicted RBP6.68□□□□□ -1.34
CSTF1-207ENST00000498689 ARMC9Q7Z3E5 817 aa6.68□□□□□ -1.34
CSTF1-207ENST00000498689 DZIP3Q86Y13 1208 aaKnown RBP6.68□□□□□ -1.34
CSTF1-207ENST00000498689 FAM43AQ8N2R8 423 aa6.68□□□□□ -1.34
CSTF1-207ENST00000498689 ZBTB38Q8NAP3 1195 aaPredicted RBP6.68□□□□□ -1.34
CSTF1-207ENST00000498689 LGR6Q9HBX8 967 aa6.68□□□□□ -1.34
CSTF1-207ENST00000498689 PAK6Q9NQU5 681 aaPredicted RBP6.68□□□□□ -1.34
CSTF1-207ENST00000498689 GABRQQ9UN88 632 aa6.68□□□□□ -1.34
CSTF1-207ENST00000498689 NIP7Q9Y221 180 aaKnown RBP eCLIP6.68□□□□□ -1.34
CSTF1-207ENST00000498689 SPTBN2O15020 2390 aa6.68□□□□□ -1.34
CSTF1-207ENST00000498689 CACNA1HO95180 2353 aa6.68□□□□□ -1.34
CSTF1-207ENST00000498689 MYPNQ86TC9 1320 aa6.68□□□□□ -1.34
CSTF1-207ENST00000498689 GVINP1Q7Z2Y8 2422 aa6.68□□□□□ -1.34
CSTF1-207ENST00000498689 ELNP15502 786 aa6.67□□□□□ -1.34
CSTF1-207ENST00000498689 RPS12P25398 132 aaKnown RBP6.67□□□□□ -1.34
CSTF1-207ENST00000498689 IL6STP40189 918 aaPredicted RBP6.67□□□□□ -1.34
CSTF1-207ENST00000498689 PSMC4P43686 418 aa6.67□□□□□ -1.34
CSTF1-207ENST00000498689 PRMT2P55345 433 aa6.67□□□□□ -1.34
CSTF1-207ENST00000498689 ZNF280AP59817 542 aaPredicted RBP6.67□□□□□ -1.34
CSTF1-207ENST00000498689 SMAD3P84022 425 aaKnown RBP6.67□□□□□ -1.34
CSTF1-207ENST00000498689 ACAP1Q15027 740 aa6.67□□□□□ -1.34
CSTF1-207ENST00000498689 SUPT20HQ8NEM7 779 aa6.67□□□□□ -1.34
CSTF1-207ENST00000498689 BRI3BPQ8WY22 251 aa6.67□□□□□ -1.34
CSTF1-207ENST00000498689 CRAMP1Q96RY5 1269 aa6.67□□□□□ -1.34
CSTF1-207ENST00000498689 ZFYVE28Q9HCC9 887 aa6.67□□□□□ -1.34
CSTF1-207ENST00000498689 TERF2IPQ9NYB0 399 aa6.67□□□□□ -1.34
CSTF1-207ENST00000498689 PLXNB2O15031 1838 aa6.66□□□□□ -1.34
CSTF1-207ENST00000498689 FYB1O15117 783 aa6.66□□□□□ -1.34
CSTF1-207ENST00000498689 PPM1GO15355 546 aaPredicted RBP6.66□□□□□ -1.34
CSTF1-207ENST00000498689 GFRA3O60609 400 aa6.66□□□□□ -1.34
CSTF1-207ENST00000498689 INHAP05111 366 aa6.66□□□□□ -1.34
CSTF1-207ENST00000498689 NF2P35240 595 aa6.66□□□□□ -1.34
CSTF1-207ENST00000498689 TNNT2P45379 298 aaPredicted RBP6.66□□□□□ -1.34
CSTF1-207ENST00000498689 PRKCZQ05513 592 aa6.66□□□□□ -1.34
CSTF1-207ENST00000498689 ADGRE1Q14246 886 aa6.66□□□□□ -1.34
CSTF1-207ENST00000498689 KIF22Q14807 665 aa6.66□□□□□ -1.34
CSTF1-207ENST00000498689 LRRC26Q2I0M4 334 aa6.66□□□□□ -1.34
CSTF1-207ENST00000498689 ZNF496Q96IT1 587 aaPredicted RBP6.66□□□□□ -1.34
CSTF1-207ENST00000498689 SLC52A2Q9HAB3 445 aa6.66□□□□□ -1.34
CSTF1-207ENST00000498689 MYOZ2Q9NPC6 264 aa6.66□□□□□ -1.34
CSTF1-207ENST00000498689 CXXC1Q9P0U4 656 aaPredicted RBP6.66□□□□□ -1.34
CSTF1-207ENST00000498689 ECE2O60344 883 aa6.65□□□□□ -1.34
CSTF1-207ENST00000498689 STARD3NLO95772 234 aa6.65□□□□□ -1.34
CSTF1-207ENST00000498689 GNRH1P01148 92 aa6.65□□□□□ -1.34
CSTF1-207ENST00000498689 GTF2E1P29083 439 aaPredicted RBP6.65□□□□□ -1.34
CSTF1-207ENST00000498689 HLFQ16534 295 aa6.65□□□□□ -1.34
CSTF1-207ENST00000498689 AKNAD1Q5T1N1 836 aa6.65□□□□□ -1.34
CSTF1-207ENST00000498689 VSIG10Q8N0Z9 540 aa6.65□□□□□ -1.34
CSTF1-207ENST00000498689 PRSS33Q8NF86 280 aa6.65□□□□□ -1.34
CSTF1-207ENST00000498689 TMC2Q8TDI7 906 aa6.65□□□□□ -1.34
CSTF1-207ENST00000498689 RBM17Q96I25 401 aaKnown RBP6.65□□□□□ -1.34
CSTF1-207ENST00000498689 NBPF3Q9H094 633 aa6.65□□□□□ -1.34
CSTF1-207ENST00000498689 PRDM12Q9H4Q4 367 aa6.65□□□□□ -1.34
CSTF1-207ENST00000498689 C11orf49Q9H6J7 331 aa6.65□□□□□ -1.34
CSTF1-207ENST00000498689 LHX6Q9UPM6 363 aa6.65□□□□□ -1.34
CSTF1-207ENST00000498689 PCDHGA4Q9Y5G9 962 aa6.65□□□□□ -1.34
CSTF1-207ENST00000498689 ABCC4O15439 1325 aa6.65□□□□□ -1.35
CSTF1-207ENST00000498689 TLR2O60603 784 aa6.64□□□□□ -1.35
CSTF1-207ENST00000498689 VIL1P09327 827 aaKnown RBP6.64□□□□□ -1.35
CSTF1-207ENST00000498689 PLEKHO1Q53GL0 409 aaPredicted RBP6.64□□□□□ -1.35
CSTF1-207ENST00000498689 ADGRA2Q96PE1 1338 aa6.64□□□□□ -1.35
CSTF1-207ENST00000498689 CCL15-CCL14A0A0B4J2E2 113 aa6.63□□□□□ -1.35
CSTF1-207ENST00000498689 TLL1O43897 1013 aa6.63□□□□□ -1.35
CSTF1-207ENST00000498689 ADCY3O60266 1144 aa6.63□□□□□ -1.35
CSTF1-207ENST00000498689 TECTAO75443 2155 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms