RNA–Protein interactions for RNA: ENST00000498534.5

CNOT4-211, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 481 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-211ENST00000498534 TNRC18O15417 2968 aaPredicted RBP15.15■□□□□ 0.02
CNOT4-211ENST00000498534 SLC34A2O95436 690 aa15.14■□□□□ 0.01
CNOT4-211ENST00000498534 CAVIN4Q5BKX8 364 aa15.14■□□□□ 0.01
CNOT4-211ENST00000498534 R3HDMLQ9H3Y0 253 aa15.14■□□□□ 0.01
CNOT4-211ENST00000498534 ZNF70Q9UC06 446 aaPredicted RBP15.14■□□□□ 0.01
CNOT4-211ENST00000498534 TNNI2P48788 182 aa15.13■□□□□ 0.01
CNOT4-211ENST00000498534 METTL24Q5JXM2 366 aa15.13■□□□□ 0.01
CNOT4-211ENST00000498534 DZIP1LQ8IYY4 767 aaKnown RBP15.13■□□□□ 0.01
CNOT4-211ENST00000498534 KAZALD1Q96I82 304 aa15.13■□□□□ 0.01
CNOT4-211ENST00000498534 BICC1Q9H694 974 aaKnown RBP15.13■□□□□ 0.01
CNOT4-211ENST00000498534 TDRD3Q9H7E2 651 aaKnown RBP15.13■□□□□ 0.01
CNOT4-211ENST00000498534 UTYO14607 1347 aa15.13■□□□□ 0.01
CNOT4-211ENST00000498534 FBXO33Q7Z6M2 555 aa15.12■□□□□ 0.01
CNOT4-211ENST00000498534 TBC1D22AQ8WUA7 517 aa15.12■□□□□ 0.01
CNOT4-211ENST00000498534 ECM29Q5VYK3 1845 aa15.12■□□□□ 0.01
CNOT4-211ENST00000498534 PDE8BO95263 885 aa15.11■□□□□ 0.01
CNOT4-211ENST00000498534 CRKP46108 304 aa15.11■□□□□ 0.01
CNOT4-211ENST00000498534 HDLBPQ00341 1268 aaKnown RBP15.11■□□□□ 0.01
CNOT4-211ENST00000498534 RABL6Q3YEC7 729 aaPredicted RBP15.11■□□□□ 0.01
CNOT4-211ENST00000498534 MRPL50Q8N5N7 158 aaKnown RBP15.11■□□□□ 0.01
CNOT4-211ENST00000498534 PTPRCP08575 1304 aa15.11■□□□□ 0.01
CNOT4-211ENST00000498534 AOX1Q06278 1338 aa15.11■□□□□ 0.01
CNOT4-211ENST00000498534 TCP10L2B9ZVM9 353 aa15.1■□□□□ 0.01
CNOT4-211ENST00000498534 IGF2BP3O00425 579 aaKnown RBP eCLIP15.1■□□□□ 0.01
CNOT4-211ENST00000498534 MAP3K9P80192 1104 aa15.1■□□□□ 0.01
CNOT4-211ENST00000498534 CHAF1AQ13111 956 aaPredicted RBP15.1■□□□□ 0.01
CNOT4-211ENST00000498534 LRRC24Q50LG9 513 aa15.1■□□□□ 0.01
CNOT4-211ENST00000498534 ERO1AQ96HE7 468 aa15.1■□□□□ 0.01
CNOT4-211ENST00000498534 ELP3Q9H9T3 547 aa15.1■□□□□ 0.01
CNOT4-211ENST00000498534 IQSEC3Q9UPP2 1182 aaPredicted RBP15.1■□□□□ 0.01
CNOT4-211ENST00000498534 TRIM17Q9Y577 477 aa15.1■□□□□ 0.01
CNOT4-211ENST00000498534 A0A1B0GUL6 1792 aa15.1■□□□□ 0.01
CNOT4-211ENST00000498534 SSC5DA1L4H1 1573 aa15.1■□□□□ 0.01
CNOT4-211ENST00000498534 E9PSI1 815 aa15.09■□□□□ 0.01
CNOT4-211ENST00000498534 INTS3Q68E01 1043 aaKnown RBP15.09■□□□□ 0.01
CNOT4-211ENST00000498534 TEKT1Q969V4 418 aa15.09■□□□□ 0.01
CNOT4-211ENST00000498534 OPTNQ96CV9 577 aa15.09■□□□□ 0.01
CNOT4-211ENST00000498534 MRIQ9BWK5 157 aa15.09■□□□□ 0.01
CNOT4-211ENST00000498534 TESPA1A2RU30 521 aaPredicted RBP15.08■□□□□ 0
CNOT4-211ENST00000498534 IFIT1P09914 478 aaKnown RBP15.08■□□□□ 0
CNOT4-211ENST00000498534 GJA5P36382 358 aa15.08■□□□□ 0
CNOT4-211ENST00000498534 CRHR2Q13324 411 aa15.08■□□□□ 0
CNOT4-211ENST00000498534 ARHGEF6Q15052 776 aa15.08■□□□□ 0
CNOT4-211ENST00000498534 OTOP1Q7RTM1 612 aa15.08■□□□□ 0
CNOT4-211ENST00000498534 ANKRD44Q8N8A2 993 aa15.08■□□□□ 0
CNOT4-211ENST00000498534 HOOK2Q96ED9 719 aa15.08■□□□□ 0
CNOT4-211ENST00000498534 TEPSINQ96N21 525 aa15.08■□□□□ 0
CNOT4-211ENST00000498534 TMEM39BQ9GZU3 492 aa15.08■□□□□ 0
CNOT4-211ENST00000498534 USP44Q9H0E7 712 aa15.08■□□□□ 0
CNOT4-211ENST00000498534 TMOD2Q9NZR1 351 aa15.08■□□□□ 0
CNOT4-211ENST00000498534 CSADQ9Y600 493 aa15.08■□□□□ 0
CNOT4-211ENST00000498534 ZNF521Q96K83 1311 aa15.08■□□□□ 0
CNOT4-211ENST00000498534 WDHD1O75717 1129 aaPredicted RBP15.07■□□□□ 0
CNOT4-211ENST00000498534 BCAMP50895 628 aa15.07■□□□□ 0
CNOT4-211ENST00000498534 GTF2A2P52657 109 aa15.07■□□□□ 0
CNOT4-211ENST00000498534 SP3Q02447 781 aa15.07■□□□□ 0
CNOT4-211ENST00000498534 PRPF38BQ5VTL8 546 aaKnown RBP15.07■□□□□ 0
CNOT4-211ENST00000498534 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.07■□□□□ 0
CNOT4-211ENST00000498534 SSH1Q8WYL5 1049 aa15.07■□□□□ 0
CNOT4-211ENST00000498534 PTPN18Q99952 460 aa15.07■□□□□ 0
CNOT4-211ENST00000498534 SUGT1Q9Y2Z0 365 aa15.07■□□□□ 0
CNOT4-211ENST00000498534 PUM3Q15397 648 aaKnown RBP15.06■□□□□ 0
CNOT4-211ENST00000498534 GRIK5Q16478 980 aa15.06■□□□□ 0
CNOT4-211ENST00000498534 VGLL2Q8N8G2 317 aa15.06■□□□□ 0
CNOT4-211ENST00000498534 KLHDC4Q8TBB5 520 aa15.06■□□□□ 0
CNOT4-211ENST00000498534 ZDHHC15Q96MV8 337 aa15.06■□□□□ 0
CNOT4-211ENST00000498534 EFCC1Q9HA90 598 aa15.06■□□□□ 0
CNOT4-211ENST00000498534 MAST3O60307 1309 aa15.06■□□□□ 0
CNOT4-211ENST00000498534 VGLL4Q14135 290 aa15.05■□□□□ -0
CNOT4-211ENST00000498534 FKBP1CQ5VVH2 108 aa15.05■□□□□ -0
CNOT4-211ENST00000498534 FAM83AQ86UY5 434 aa15.05■□□□□ -0
CNOT4-211ENST00000498534 CD99L2Q8TCZ2 262 aa15.05■□□□□ -0
CNOT4-211ENST00000498534 MS4A4AQ96JQ5 239 aa15.05■□□□□ -0
CNOT4-211ENST00000498534 ZFYVE28Q9HCC9 887 aa15.05■□□□□ -0
CNOT4-211ENST00000498534 PTPN22Q9Y2R2 807 aa15.05■□□□□ -0
CNOT4-211ENST00000498534 KIF16BQ96L93 1317 aa15.05■□□□□ -0
CNOT4-211ENST00000498534 CCL15-CCL14A0A0B4J2E2 113 aa15.04■□□□□ -0
CNOT4-211ENST00000498534 EYA2O00167 538 aa15.04■□□□□ -0
CNOT4-211ENST00000498534 SLC5A1P13866 664 aa15.04■□□□□ -0
CNOT4-211ENST00000498534 CACNB3P54284 484 aa15.04■□□□□ -0
CNOT4-211ENST00000498534 SLFN5Q08AF3 891 aa15.04■□□□□ -0
CNOT4-211ENST00000498534 CCL15Q16663 113 aa15.04■□□□□ -0
CNOT4-211ENST00000498534 ALDH1L2Q3SY69 923 aa15.04■□□□□ -0
CNOT4-211ENST00000498534 HHIPL2Q6UWX4 724 aa15.04■□□□□ -0
CNOT4-211ENST00000498534 CDAN1Q8IWY9 1227 aa15.04■□□□□ -0
CNOT4-211ENST00000498534 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.04■□□□□ -0
CNOT4-211ENST00000498534 WDR66Q8TBY9 1149 aa15.04■□□□□ -0
CNOT4-211ENST00000498534 LPIN2Q92539 896 aa15.04■□□□□ -0
CNOT4-211ENST00000498534 OTUD5Q96G74 571 aa15.04■□□□□ -0
CNOT4-211ENST00000498534 FGFR2P21802 821 aa15.03■□□□□ -0
CNOT4-211ENST00000498534 TAF1CQ15572 869 aaPredicted RBP15.03■□□□□ -0
CNOT4-211ENST00000498534 DCAF15Q66K64 600 aa15.03■□□□□ -0
CNOT4-211ENST00000498534 APOBEC3HQ6NTF7 200 aaKnown RBP15.03■□□□□ -0
CNOT4-211ENST00000498534 ERO1BQ86YB8 467 aa15.03■□□□□ -0
CNOT4-211ENST00000498534 BRI3BPQ8WY22 251 aa15.03■□□□□ -0
CNOT4-211ENST00000498534 GNL3LQ9NVN8 582 aaKnown RBP15.03■□□□□ -0
CNOT4-211ENST00000498534 HDAC5Q9UQL6 1122 aa15.03■□□□□ -0
CNOT4-211ENST00000498534 CETPP11597 493 aa15.02■□□□□ -0
CNOT4-211ENST00000498534 WRNIP1Q96S55 665 aa15.02■□□□□ -0
CNOT4-211ENST00000498534 SMC4Q9NTJ3 1288 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms