RNA–Protein interactions for RNA: ENST00000498443.5

TSPAN1-209, Transcript of tetraspanin 1, humanhuman

TSL 5

Gene TSPAN1, Length 1,071 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-209ENST00000498443 CSRNP1Q96S65 589 aa12.34□□□□□ -0.43
TSPAN1-209ENST00000498443 CD209Q9NNX6 404 aa12.34□□□□□ -0.43
TSPAN1-209ENST00000498443 HMMRO75330 724 aa12.33□□□□□ -0.44
TSPAN1-209ENST00000498443 SEC24BO95487 1268 aa12.33□□□□□ -0.44
TSPAN1-209ENST00000498443 SLC4A3P48751 1232 aa12.33□□□□□ -0.44
TSPAN1-209ENST00000498443 GTF2IP78347 998 aa12.33□□□□□ -0.44
TSPAN1-209ENST00000498443 GSE1Q14687 1217 aa12.33□□□□□ -0.44
TSPAN1-209ENST00000498443 ANKRD45Q5TZF3 282 aa12.33□□□□□ -0.44
TSPAN1-209ENST00000498443 HSCBQ8IWL3 235 aa12.33□□□□□ -0.44
TSPAN1-209ENST00000498443 CERS5Q8N5B7 392 aa12.33□□□□□ -0.44
TSPAN1-209ENST00000498443 SSH3Q8TE77 659 aa12.33□□□□□ -0.44
TSPAN1-209ENST00000498443 EXOC6BQ9Y2D4 811 aa12.33□□□□□ -0.44
TSPAN1-209ENST00000498443 POLR2AP24928 1970 aaKnown RBP12.32□□□□□ -0.44
TSPAN1-209ENST00000498443 MED23Q9ULK4 1368 aa12.32□□□□□ -0.44
TSPAN1-209ENST00000498443 SURF6O75683 361 aaKnown RBP12.32□□□□□ -0.44
TSPAN1-209ENST00000498443 TBC1D8O95759 1140 aa12.32□□□□□ -0.44
TSPAN1-209ENST00000498443 VIL1P09327 827 aaKnown RBP12.32□□□□□ -0.44
TSPAN1-209ENST00000498443 RBM25P49756 843 aaKnown RBP12.32□□□□□ -0.44
TSPAN1-209ENST00000498443 HABP4Q5JVS0 413 aaKnown RBP12.32□□□□□ -0.44
TSPAN1-209ENST00000498443 VPS33BQ9H267 617 aa12.32□□□□□ -0.44
TSPAN1-209ENST00000498443 AOX1Q06278 1338 aa12.32□□□□□ -0.44
TSPAN1-209ENST00000498443 MROH5Q6ZUA9 1318 aa12.32□□□□□ -0.44
TSPAN1-209ENST00000498443 F8W031 263 aaPredicted RBP12.31□□□□□ -0.44
TSPAN1-209ENST00000498443 CIAO1O76071 339 aa12.31□□□□□ -0.44
TSPAN1-209ENST00000498443 SLC10A3P09131 477 aa12.31□□□□□ -0.44
TSPAN1-209ENST00000498443 PHKA1P46020 1223 aa12.31□□□□□ -0.44
TSPAN1-209ENST00000498443 MFAP1P55081 439 aaKnown RBP12.31□□□□□ -0.44
TSPAN1-209ENST00000498443 UBE4AQ14139 1066 aa12.31□□□□□ -0.44
TSPAN1-209ENST00000498443 DACT2Q5SW24 774 aa12.31□□□□□ -0.44
TSPAN1-209ENST00000498443 CASC1Q6TDU7 716 aa12.31□□□□□ -0.44
TSPAN1-209ENST00000498443 FBXO33Q7Z6M2 555 aa12.31□□□□□ -0.44
TSPAN1-209ENST00000498443 SNX21Q969T3 373 aa12.31□□□□□ -0.44
TSPAN1-209ENST00000498443 LNPKQ9C0E8 428 aa12.31□□□□□ -0.44
TSPAN1-209ENST00000498443 CEP126Q9P2H0 1117 aa12.31□□□□□ -0.44
TSPAN1-209ENST00000498443 USP17L3A6NCW0 530 aa12.3□□□□□ -0.44
TSPAN1-209ENST00000498443 USP17L4A6NCW7 530 aa12.3□□□□□ -0.44
TSPAN1-209ENST00000498443 CDC45O75419 566 aa12.3□□□□□ -0.44
TSPAN1-209ENST00000498443 PTMSP20962 102 aa12.3□□□□□ -0.44
TSPAN1-209ENST00000498443 HIBADHP31937 336 aaKnown RBP12.3□□□□□ -0.44
TSPAN1-209ENST00000498443 MKRN3Q13064 507 aaKnown RBP12.3□□□□□ -0.44
TSPAN1-209ENST00000498443 CHAF1AQ13111 956 aaPredicted RBP12.3□□□□□ -0.44
TSPAN1-209ENST00000498443 ATP2B3Q16720 1220 aa12.3□□□□□ -0.44
TSPAN1-209ENST00000498443 TTLL5Q6EMB2 1281 aa12.3□□□□□ -0.44
TSPAN1-209ENST00000498443 C15orf52Q6ZUT6 534 aaKnown RBP12.3□□□□□ -0.44
TSPAN1-209ENST00000498443 USP17L1Q7RTZ2 530 aa12.3□□□□□ -0.44
TSPAN1-209ENST00000498443 SULF1Q8IWU6 871 aa12.3□□□□□ -0.44
TSPAN1-209ENST00000498443 ZNF296Q8WUU4 475 aaPredicted RBP12.3□□□□□ -0.44
TSPAN1-209ENST00000498443 GMLQ99445 158 aa12.3□□□□□ -0.44
TSPAN1-209ENST00000498443 COA1Q9GZY4 146 aa12.3□□□□□ -0.44
TSPAN1-209ENST00000498443 DCTPP1Q9H773 170 aa12.3□□□□□ -0.44
TSPAN1-209ENST00000498443 TLR7Q9NYK1 1049 aaKnown RBP12.3□□□□□ -0.44
TSPAN1-209ENST00000498443 CHMP5Q9NZZ3 219 aa12.3□□□□□ -0.44
TSPAN1-209ENST00000498443 ZNF646O15015 1829 aaPredicted RBP12.3□□□□□ -0.44
TSPAN1-209ENST00000498443 SMARCA5O60264 1052 aaPredicted RBP12.29□□□□□ -0.44
TSPAN1-209ENST00000498443 IL15P40933 162 aaPredicted RBP12.29□□□□□ -0.44
TSPAN1-209ENST00000498443 G3BP1Q13283 466 aaKnown RBP eCLIP12.29□□□□□ -0.44
TSPAN1-209ENST00000498443 RSBN1LQ6PCB5 846 aaPredicted RBP12.29□□□□□ -0.44
TSPAN1-209ENST00000498443 PI16Q6UXB8 463 aa12.29□□□□□ -0.44
TSPAN1-209ENST00000498443 RASAL3Q86YV0 1011 aa12.29□□□□□ -0.44
TSPAN1-209ENST00000498443 KIAA0825Q8IV33 1275 aa12.29□□□□□ -0.44
TSPAN1-209ENST00000498443 TDRD7Q8NHU6 1098 aaKnown RBP12.29□□□□□ -0.44
TSPAN1-209ENST00000498443 NEUROD6Q96NK8 337 aa12.29□□□□□ -0.44
TSPAN1-209ENST00000498443 TBC1D2Q9BYX2 928 aa12.29□□□□□ -0.44
TSPAN1-209ENST00000498443 CCDC8Q9H0W5 538 aaPredicted RBP12.29□□□□□ -0.44
TSPAN1-209ENST00000498443 IL1RAPL2Q9NP60 686 aa12.29□□□□□ -0.44
TSPAN1-209ENST00000498443 GGA3Q9NZ52 723 aa12.29□□□□□ -0.44
TSPAN1-209ENST00000498443 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.29□□□□□ -0.44
TSPAN1-209ENST00000498443 COL1A1P02452 1464 aaPredicted RBP12.28□□□□□ -0.44
TSPAN1-209ENST00000498443 A0A1B0GUL7 405 aa12.28□□□□□ -0.44
TSPAN1-209ENST00000498443 IL1R1P14778 569 aa12.28□□□□□ -0.44
TSPAN1-209ENST00000498443 SCARF1Q14162 830 aa12.28□□□□□ -0.44
TSPAN1-209ENST00000498443 PUM3Q15397 648 aaKnown RBP12.28□□□□□ -0.44
TSPAN1-209ENST00000498443 PODNQ7Z5L7 613 aa12.28□□□□□ -0.44
TSPAN1-209ENST00000498443 IL27Q8NEV9 243 aa12.28□□□□□ -0.44
TSPAN1-209ENST00000498443 CDCA5Q96FF9 252 aa12.28□□□□□ -0.44
TSPAN1-209ENST00000498443 XAGE2Q96GT9 111 aa12.28□□□□□ -0.44
TSPAN1-209ENST00000498443 DBNDD2Q9BQY9 259 aa12.28□□□□□ -0.44
TSPAN1-209ENST00000498443 CIZ1Q9ULV3 898 aaPredicted RBP12.28□□□□□ -0.44
TSPAN1-209ENST00000498443 NDUFB9Q9Y6M9 179 aa12.28□□□□□ -0.44
TSPAN1-209ENST00000498443 OS9Q13438 667 aaPredicted RBP12.27□□□□□ -0.45
TSPAN1-209ENST00000498443 PKN2Q16513 984 aaKnown RBP12.27□□□□□ -0.45
TSPAN1-209ENST00000498443 KIF4BQ2VIQ3 1234 aa12.27□□□□□ -0.45
TSPAN1-209ENST00000498443 MOB2Q70IA6 237 aa12.27□□□□□ -0.45
TSPAN1-209ENST00000498443 ZNF804AQ7Z570 1209 aa12.27□□□□□ -0.45
TSPAN1-209ENST00000498443 LPIN2Q92539 896 aa12.27□□□□□ -0.45
TSPAN1-209ENST00000498443 EAF2Q96CJ1 260 aaPredicted RBP12.27□□□□□ -0.45
TSPAN1-209ENST00000498443 HDAC5Q9UQL6 1122 aa12.27□□□□□ -0.45
TSPAN1-209ENST00000498443 IFIT1P09914 478 aaKnown RBP12.26□□□□□ -0.45
TSPAN1-209ENST00000498443 SLC5A1P13866 664 aa12.26□□□□□ -0.45
TSPAN1-209ENST00000498443 TTLL12Q14166 644 aaPredicted RBP12.26□□□□□ -0.45
TSPAN1-209ENST00000498443 NBPF9Q3BBW0 867 aa12.26□□□□□ -0.45
TSPAN1-209ENST00000498443 TNNI3KQ59H18 835 aa12.26□□□□□ -0.45
TSPAN1-209ENST00000498443 STRIP1Q5VSL9 837 aa12.26□□□□□ -0.45
TSPAN1-209ENST00000498443 PRAMEF18Q5VWM3 479 aa12.26□□□□□ -0.45
TSPAN1-209ENST00000498443 CCDC102BQ68D86 513 aa12.26□□□□□ -0.45
TSPAN1-209ENST00000498443 SNRKQ9NRH2 765 aa12.26□□□□□ -0.45
TSPAN1-209ENST00000498443 FPGT-TNNI3KV9GXZ4 949 aa12.26□□□□□ -0.45
TSPAN1-209ENST00000498443 ANGEL2Q5VTE6 544 aaKnown RBP12.25□□□□□ -0.45
TSPAN1-209ENST00000498443 FBXO46Q6PJ61 603 aaPredicted RBP12.25□□□□□ -0.45
TSPAN1-209ENST00000498443 TBC1D9Q6ZT07 1266 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms