RNA–Protein interactions for RNA: ENST00000497869.5

TNFRSF4-203, Transcript of TNF receptor superfamily member 4, humanhuman

TSL 2

Gene TNFRSF4, Length 1,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-203ENST00000497869 ZSCAN25Q6NSZ9 544 aa29.22■■■□□ 2.27
TNFRSF4-203ENST00000497869 RAD50Q92878 1312 aa29.22■■■□□ 2.27
TNFRSF4-203ENST00000497869 ANO2Q9NQ90 1003 aa29.21■■■□□ 2.27
TNFRSF4-203ENST00000497869 FOXP2O15409 715 aa29.2■■■□□ 2.27
TNFRSF4-203ENST00000497869 VPS53Q5VIR6 699 aa29.2■■■□□ 2.27
TNFRSF4-203ENST00000497869 ZNF646O15015 1829 aaPredicted RBP29.2■■■□□ 2.27
TNFRSF4-203ENST00000497869 LDHBP07195 334 aaKnown RBP29.2■■■□□ 2.26
TNFRSF4-203ENST00000497869 CYP7A1P22680 504 aa29.2■■■□□ 2.26
TNFRSF4-203ENST00000497869 STRIP1Q5VSL9 837 aa29.2■■■□□ 2.26
TNFRSF4-203ENST00000497869 DIXDC1Q155Q3 683 aa29.19■■■□□ 2.26
TNFRSF4-203ENST00000497869 LRRFIP1Q32MZ4 808 aaKnown RBP29.19■■■□□ 2.26
TNFRSF4-203ENST00000497869 ZGPATQ8N5A5 531 aaKnown RBP29.19■■■□□ 2.26
TNFRSF4-203ENST00000497869 TBC1D22AQ8WUA7 517 aa29.19■■■□□ 2.26
TNFRSF4-203ENST00000497869 CCDC171Q6TFL3 1326 aa29.18■■■□□ 2.26
TNFRSF4-203ENST00000497869 USP17L3A6NCW0 530 aa29.18■■■□□ 2.26
TNFRSF4-203ENST00000497869 USP17L4A6NCW7 530 aa29.18■■■□□ 2.26
TNFRSF4-203ENST00000497869 NAA16Q6N069 864 aaPredicted RBP29.18■■■□□ 2.26
TNFRSF4-203ENST00000497869 ARHGAP27Q6ZUM4 889 aa29.18■■■□□ 2.26
TNFRSF4-203ENST00000497869 USP17L1Q7RTZ2 530 aa29.18■■■□□ 2.26
TNFRSF4-203ENST00000497869 MIGA1Q8NAN2 632 aa29.18■■■□□ 2.26
TNFRSF4-203ENST00000497869 RAD17O75943 681 aa29.17■■■□□ 2.26
TNFRSF4-203ENST00000497869 REC8O95072 547 aa29.17■■■□□ 2.26
TNFRSF4-203ENST00000497869 SPTY2D1Q68D10 685 aaPredicted RBP29.17■■■□□ 2.26
TNFRSF4-203ENST00000497869 MYH7P12883 1935 aa29.17■■■□□ 2.26
TNFRSF4-203ENST00000497869 TBC1D32Q96NH3 1257 aa29.17■■■□□ 2.26
TNFRSF4-203ENST00000497869 ZNRF3Q9ULT6 936 aa29.17■■■□□ 2.26
TNFRSF4-203ENST00000497869 GPAA1O43292 621 aa29.16■■■□□ 2.26
TNFRSF4-203ENST00000497869 NIM1KQ8IY84 436 aa29.16■■■□□ 2.26
TNFRSF4-203ENST00000497869 DZIP1Q86YF9 867 aaKnown RBP29.15■■■□□ 2.26
TNFRSF4-203ENST00000497869 RIOK1Q9BRS2 568 aaKnown RBP29.15■■■□□ 2.26
TNFRSF4-203ENST00000497869 C22orf23Q9BZE7 217 aa29.15■■■□□ 2.26
TNFRSF4-203ENST00000497869 F8W031 263 aaPredicted RBP29.14■■■□□ 2.26
TNFRSF4-203ENST00000497869 MBD4O95243 580 aa29.14■■■□□ 2.26
TNFRSF4-203ENST00000497869 LCORLQ8N3X6 602 aa29.14■■■□□ 2.26
TNFRSF4-203ENST00000497869 STRBPQ96SI9 672 aaKnown RBP29.14■■■□□ 2.26
TNFRSF4-203ENST00000497869 ARMT1Q9H993 441 aa29.14■■■□□ 2.26
TNFRSF4-203ENST00000497869 PSMD14O00487 310 aa29.14■■■□□ 2.25
TNFRSF4-203ENST00000497869 DYNLL1P63167 89 aaKnown RBP29.14■■■□□ 2.25
TNFRSF4-203ENST00000497869 CXCL9Q07325 125 aa29.13■■■□□ 2.25
TNFRSF4-203ENST00000497869 MAP4K1Q92918 833 aa29.13■■■□□ 2.25
TNFRSF4-203ENST00000497869 FKBP1AP62942 108 aaKnown RBP29.12■■■□□ 2.25
TNFRSF4-203ENST00000497869 VIL1P09327 827 aaKnown RBP29.11■■■□□ 2.25
TNFRSF4-203ENST00000497869 HSPD1P10809 573 aaKnown RBP29.11■■■□□ 2.25
TNFRSF4-203ENST00000497869 RBM25P49756 843 aaKnown RBP29.11■■■□□ 2.25
TNFRSF4-203ENST00000497869 PALD1Q9ULE6 856 aa29.11■■■□□ 2.25
TNFRSF4-203ENST00000497869 SUGT1Q9Y2Z0 365 aa29.11■■■□□ 2.25
TNFRSF4-203ENST00000497869 RBM19Q9Y4C8 960 aaKnown RBP29.11■■■□□ 2.25
TNFRSF4-203ENST00000497869 PRKAB2O43741 272 aa29.11■■■□□ 2.25
TNFRSF4-203ENST00000497869 KIAA1211Q6ZU35 1233 aa29.11■■■□□ 2.25
TNFRSF4-203ENST00000497869 KIAA0825Q8IV33 1275 aa29.11■■■□□ 2.25
TNFRSF4-203ENST00000497869 TTF2Q9UNY4 1162 aaKnown RBP29.11■■■□□ 2.25
TNFRSF4-203ENST00000497869 MAST2Q6P0Q8 1798 aa29.11■■■□□ 2.25
TNFRSF4-203ENST00000497869 JDP2Q8WYK2 163 aa29.1■■■□□ 2.25
TNFRSF4-203ENST00000497869 AIDAQ96BJ3 306 aa29.1■■■□□ 2.25
TNFRSF4-203ENST00000497869 GMLQ99445 158 aa29.1■■■□□ 2.25
TNFRSF4-203ENST00000497869 KIF2CQ99661 725 aa29.1■■■□□ 2.25
TNFRSF4-203ENST00000497869 UPF2Q9HAU5 1272 aaKnown RBP29.1■■■□□ 2.25
TNFRSF4-203ENST00000497869 ZBTB12Q9Y330 459 aaPredicted RBP29.1■■■□□ 2.25
TNFRSF4-203ENST00000497869 SCNN1DP51172 638 aa29.09■■■□□ 2.25
TNFRSF4-203ENST00000497869 AATFQ9NY61 560 aaKnown RBP eCLIP29.09■■■□□ 2.25
TNFRSF4-203ENST00000497869 PCDHAC2Q9Y5I4 1007 aa29.09■■■□□ 2.25
TNFRSF4-203ENST00000497869 RBM8AQ9Y5S9 174 aaKnown RBP29.09■■■□□ 2.25
TNFRSF4-203ENST00000497869 MAGEB6P1A0A0J9YX57 407 aa29.08■■■□□ 2.25
TNFRSF4-203ENST00000497869 FZD9O00144 591 aa29.08■■■□□ 2.25
TNFRSF4-203ENST00000497869 IGSF3O75054 1194 aa29.08■■■□□ 2.25
TNFRSF4-203ENST00000497869 RSBN1LQ6PCB5 846 aaPredicted RBP29.08■■■□□ 2.25
TNFRSF4-203ENST00000497869 TAF6LQ9Y6J9 622 aa29.08■■■□□ 2.25
TNFRSF4-203ENST00000497869 MROH7-TTC4A0A0A0MT08 1334 aa29.08■■■□□ 2.25
TNFRSF4-203ENST00000497869 GAKO14976 1311 aa29.08■■■□□ 2.25
TNFRSF4-203ENST00000497869 FAM163AQ96GL9 167 aaPredicted RBP29.08■■■□□ 2.25
TNFRSF4-203ENST00000497869 HSPA4P34932 840 aa29.07■■■□□ 2.24
TNFRSF4-203ENST00000497869 NECTIN1Q15223 517 aa29.07■■■□□ 2.24
TNFRSF4-203ENST00000497869 DSCC1Q9BVC3 393 aa29.07■■■□□ 2.24
TNFRSF4-203ENST00000497869 EPB41L4AQ9HCS5 686 aaPredicted RBP29.07■■■□□ 2.24
TNFRSF4-203ENST00000497869 DAGLAQ9Y4D2 1042 aa29.07■■■□□ 2.24
TNFRSF4-203ENST00000497869 EPB41L2O43491 1005 aaKnown RBP29.06■■■□□ 2.24
TNFRSF4-203ENST00000497869 LMNB1P20700 586 aa29.06■■■□□ 2.24
TNFRSF4-203ENST00000497869 PSME4Q14997 1843 aa29.06■■■□□ 2.24
TNFRSF4-203ENST00000497869 GPR75-ASB3A0A0A6YYF3 556 aa29.06■■■□□ 2.24
TNFRSF4-203ENST00000497869 GSG1L2A8MUP6 293 aa29.06■■■□□ 2.24
TNFRSF4-203ENST00000497869 EIF5BO60841 1220 aaKnown RBP29.06■■■□□ 2.24
TNFRSF4-203ENST00000497869 GSTO1P78417 241 aa29.06■■■□□ 2.24
TNFRSF4-203ENST00000497869 TMED8Q6PL24 325 aaPredicted RBP29.06■■■□□ 2.24
TNFRSF4-203ENST00000497869 RASEFQ8IZ41 740 aa29.06■■■□□ 2.24
TNFRSF4-203ENST00000497869 ZNF541Q9H0D2 1346 aa29.05■■■□□ 2.24
TNFRSF4-203ENST00000497869 PPP4CP60510 307 aa29.04■■■□□ 2.24
TNFRSF4-203ENST00000497869 CIAPIN1Q6FI81 312 aa29.04■■■□□ 2.24
TNFRSF4-203ENST00000497869 SDR42E1Q8WUS8 393 aa29.04■■■□□ 2.24
TNFRSF4-203ENST00000497869 ADAMTSL1Q8N6G6 1762 aa29.04■■■□□ 2.24
TNFRSF4-203ENST00000497869 BTDP43251 543 aa29.03■■■□□ 2.24
TNFRSF4-203ENST00000497869 GPR162Q16538 588 aa29.03■■■□□ 2.24
TNFRSF4-203ENST00000497869 SH3RF3Q8TEJ3 882 aaPredicted RBP29.03■■■□□ 2.24
TNFRSF4-203ENST00000497869 CCDC88AQ3V6T2 1871 aa29.03■■■□□ 2.24
TNFRSF4-203ENST00000497869 FGAP02671 866 aa29.03■■■□□ 2.24
TNFRSF4-203ENST00000497869 LDHCP07864 332 aa29.03■■■□□ 2.24
TNFRSF4-203ENST00000497869 RHBDL3P58872 404 aa29.03■■■□□ 2.24
TNFRSF4-203ENST00000497869 KCNB2Q92953 911 aa29.03■■■□□ 2.24
TNFRSF4-203ENST00000497869 SLC4A4Q9Y6R1 1079 aa29.03■■■□□ 2.24
TNFRSF4-203ENST00000497869 SHTN1A0MZ66 631 aa29.02■■■□□ 2.24
TNFRSF4-203ENST00000497869 CRKP46108 304 aa29.02■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms