RNA–Protein interactions for RNA: ENST00000497658.5

PHC3-217, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best) BASIC

Gene PHC3, Length 2,087 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-217ENST00000497658 INSM1Q01101 510 aaPredicted RBP6.59□□□□□ -1.35
PHC3-217ENST00000497658 GPS2Q13227 327 aa6.59□□□□□ -1.35
PHC3-217ENST00000497658 ZRSR1Q15695 479 aaKnown RBP6.59□□□□□ -1.35
PHC3-217ENST00000497658 PLA2G2CQ5R387 149 aa6.59□□□□□ -1.35
PHC3-217ENST00000497658 C11orf57Q6ZUT1 292 aaPredicted RBP6.59□□□□□ -1.35
PHC3-217ENST00000497658 AACSQ86V21 672 aa6.59□□□□□ -1.35
PHC3-217ENST00000497658 CCAR1Q8IX12 1150 aaKnown RBP6.59□□□□□ -1.35
PHC3-217ENST00000497658 TXLNBQ8N3L3 684 aa6.59□□□□□ -1.35
PHC3-217ENST00000497658 ENGASEQ8NFI3 743 aa6.59□□□□□ -1.35
PHC3-217ENST00000497658 BRF1Q92994 677 aa6.59□□□□□ -1.35
PHC3-217ENST00000497658 NEK1Q96PY6 1258 aa6.59□□□□□ -1.35
PHC3-217ENST00000497658 ZNF446Q9NWS9 450 aa6.59□□□□□ -1.35
PHC3-217ENST00000497658 USP16Q9Y5T5 823 aa6.59□□□□□ -1.35
PHC3-217ENST00000497658 FHOD1Q9Y613 1164 aa6.59□□□□□ -1.35
PHC3-217ENST00000497658 PHLPP2Q6ZVD8 1323 aa6.59□□□□□ -1.35
PHC3-217ENST00000497658 NUTM2FA1L443 756 aa6.59□□□□□ -1.35
PHC3-217ENST00000497658 ADH1BP00325 375 aa6.59□□□□□ -1.35
PHC3-217ENST00000497658 AVPP01185 164 aa6.59□□□□□ -1.35
PHC3-217ENST00000497658 SFPQP23246 707 aaKnown RBP eCLIP6.59□□□□□ -1.35
PHC3-217ENST00000497658 ADD1P35611 737 aaKnown RBP6.59□□□□□ -1.35
PHC3-217ENST00000497658 EIF4A1P60842 406 aaKnown RBP6.59□□□□□ -1.35
PHC3-217ENST00000497658 G3BP1Q13283 466 aaKnown RBP eCLIP6.59□□□□□ -1.35
PHC3-217ENST00000497658 NUTM2GQ5VZR2 741 aa6.59□□□□□ -1.35
PHC3-217ENST00000497658 E4F1Q66K89 784 aaPredicted RBP6.59□□□□□ -1.35
PHC3-217ENST00000497658 TMCO3Q6UWJ1 677 aa6.59□□□□□ -1.35
PHC3-217ENST00000497658 UBXN4Q92575 508 aa6.59□□□□□ -1.35
PHC3-217ENST00000497658 FAM227BQ96M60 508 aa6.59□□□□□ -1.35
PHC3-217ENST00000497658 TRMT1Q9NXH9 659 aaKnown RBP6.59□□□□□ -1.35
PHC3-217ENST00000497658 C9orf78Q9NZ63 289 aaPredicted RBP6.59□□□□□ -1.35
PHC3-217ENST00000497658 DBF4Q9UBU7 674 aaPredicted RBP6.59□□□□□ -1.35
PHC3-217ENST00000497658 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.59□□□□□ -1.353e-6■□□□□ 11.1
PHC3-217ENST00000497658 A0A1W2PQ27 194 aa6.58□□□□□ -1.36
PHC3-217ENST00000497658 A0A1W2PQ64 194 aa6.58□□□□□ -1.36
PHC3-217ENST00000497658 A0A1W2PQD8 194 aa6.58□□□□□ -1.36
PHC3-217ENST00000497658 EFCAB8A8MWE9 144 aa6.58□□□□□ -1.36
PHC3-217ENST00000497658 UTYO14607 1347 aa6.58□□□□□ -1.36
PHC3-217ENST00000497658 MYO1BO43795 1136 aa6.58□□□□□ -1.36
PHC3-217ENST00000497658 TAF5LO75529 589 aa6.58□□□□□ -1.36
PHC3-217ENST00000497658 ZRANB2O95218 330 aaKnown RBP eCLIP6.58□□□□□ -1.36
PHC3-217ENST00000497658 PNMA6AP0CW24 399 aaPredicted RBP6.58□□□□□ -1.36
PHC3-217ENST00000497658 ETF1P62495 437 aaKnown RBP6.58□□□□□ -1.36
PHC3-217ENST00000497658 ERCC6LQ2NKX8 1250 aa6.58□□□□□ -1.36
PHC3-217ENST00000497658 MUM1L1Q5H9M0 696 aa6.58□□□□□ -1.36
PHC3-217ENST00000497658 ADALQ6DHV7 355 aa6.58□□□□□ -1.36
PHC3-217ENST00000497658 FCHSD1Q86WN1 690 aa6.58□□□□□ -1.36
PHC3-217ENST00000497658 RGS22Q8NE09 1264 aa6.58□□□□□ -1.36
PHC3-217ENST00000497658 PPP1R13BQ96KQ4 1090 aa6.58□□□□□ -1.36
PHC3-217ENST00000497658 FSD1Q9BTV5 496 aa6.58□□□□□ -1.36
PHC3-217ENST00000497658 ROBO2Q9HCK4 1378 aa6.58□□□□□ -1.36
PHC3-217ENST00000497658 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.58□□□□□ -1.36
PHC3-217ENST00000497658 GMPR2Q9P2T1 348 aaKnown RBP6.58□□□□□ -1.36
PHC3-217ENST00000497658 SLIT1O75093 1534 aa6.58□□□□□ -1.36
PHC3-217ENST00000497658 A0A0D9SFI3 127 aa6.57□□□□□ -1.36
PHC3-217ENST00000497658 GOLGA6L9A6NEM1 432 aa6.57□□□□□ -1.36
PHC3-217ENST00000497658 PFKFB2O60825 505 aa6.57□□□□□ -1.36
PHC3-217ENST00000497658 ARID5BQ14865 1188 aa6.57□□□□□ -1.36
PHC3-217ENST00000497658 E2F4Q16254 413 aa6.57□□□□□ -1.36
PHC3-217ENST00000497658 ARHGAP29Q52LW3 1261 aa6.57□□□□□ -1.36
PHC3-217ENST00000497658 KSR2Q6VAB6 950 aa6.57□□□□□ -1.36
PHC3-217ENST00000497658 NBPF11Q86T75 865 aa6.57□□□□□ -1.36
PHC3-217ENST00000497658 CHPF2Q9P2E5 772 aa6.57□□□□□ -1.36
PHC3-217ENST00000497658 TSPOAP1O95153 1857 aa6.57□□□□□ -1.36
PHC3-217ENST00000497658 RIMS1Q86UR5 1692 aaKnown RBP6.57□□□□□ -1.36
PHC3-217ENST00000497658 NCAPD2Q15021 1401 aa6.57□□□□□ -1.36
PHC3-217ENST00000497658 IKBKBO14920 756 aa6.57□□□□□ -1.36
PHC3-217ENST00000497658 EIF2S2P20042 333 aaKnown RBP6.57□□□□□ -1.36
PHC3-217ENST00000497658 PSME1Q06323 249 aa6.57□□□□□ -1.36
PHC3-217ENST00000497658 STK3Q13188 491 aa6.57□□□□□ -1.36
PHC3-217ENST00000497658 CCDC158Q5M9N0 1113 aa6.57□□□□□ -1.36
PHC3-217ENST00000497658 SYT10Q6XYQ8 523 aa6.57□□□□□ -1.36
PHC3-217ENST00000497658 FMR1NBQ8N0W7 255 aaPredicted RBP6.57□□□□□ -1.36
PHC3-217ENST00000497658 AOPEPQ8N6M6 819 aa6.57□□□□□ -1.36
PHC3-217ENST00000497658 LINS1Q8NG48 757 aa6.57□□□□□ -1.36
PHC3-217ENST00000497658 MRPS27Q92552 414 aaKnown RBP6.57□□□□□ -1.36
PHC3-217ENST00000497658 EAF2Q96CJ1 260 aaPredicted RBP6.57□□□□□ -1.36
PHC3-217ENST00000497658 SDF4Q9BRK5 362 aa6.57□□□□□ -1.36
PHC3-217ENST00000497658 ORC3Q9UBD5 711 aaPredicted RBP6.57□□□□□ -1.36
PHC3-217ENST00000497658 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.57□□□□□ -1.36
PHC3-217ENST00000497658 MED1Q15648 1581 aaPredicted RBP6.57□□□□□ -1.36
PHC3-217ENST00000497658 ERICH4A6NGS2 130 aa6.56□□□□□ -1.36
PHC3-217ENST00000497658 ZSCAN12O43309 604 aa6.56□□□□□ -1.36
PHC3-217ENST00000497658 CBFA2T2O43439 604 aa6.56□□□□□ -1.36
PHC3-217ENST00000497658 JAK2O60674 1132 aa6.56□□□□□ -1.36
PHC3-217ENST00000497658 SASH1O94885 1247 aa6.56□□□□□ -1.36
PHC3-217ENST00000497658 HSP90B1P14625 803 aaKnown RBP6.56□□□□□ -1.36
PHC3-217ENST00000497658 HOXC9P31274 260 aa6.56□□□□□ -1.36
PHC3-217ENST00000497658 ME1P48163 572 aa6.56□□□□□ -1.36
PHC3-217ENST00000497658 HNRNPH2P55795 449 aaKnown RBP6.56□□□□□ -1.36
PHC3-217ENST00000497658 TUBB4BP68371 445 aa6.56□□□□□ -1.36
PHC3-217ENST00000497658 LRRFIP1Q32MZ4 808 aaKnown RBP6.56□□□□□ -1.36
PHC3-217ENST00000497658 JAKMIP3Q5VZ66 844 aa6.56□□□□□ -1.36
PHC3-217ENST00000497658 Q6ZUG5 572 aa6.56□□□□□ -1.36
PHC3-217ENST00000497658 HOMER1Q86YM7 354 aa6.56□□□□□ -1.36
PHC3-217ENST00000497658 GPR161Q8N6U8 529 aaKnown RBP6.56□□□□□ -1.36
PHC3-217ENST00000497658 MNS1Q8NEH6 495 aa6.56□□□□□ -1.36
PHC3-217ENST00000497658 DDX54Q8TDD1 881 aaKnown RBP6.56□□□□□ -1.36
PHC3-217ENST00000497658 KCNG4Q8TDN1 519 aa6.56□□□□□ -1.36
PHC3-217ENST00000497658 IPO4Q8TEX9 1081 aaKnown RBP6.56□□□□□ -1.36
PHC3-217ENST00000497658 MPHOSPH8Q99549 860 aa6.56□□□□□ -1.36
PHC3-217ENST00000497658 AGXT2Q9BYV1 514 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms