RNA–Protein interactions for RNA: ENST00000497627.1

PLXNB1-219, Transcript of plexin B1, humanhuman

TSL 3

Gene PLXNB1, Length 317 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB1-219ENST00000497627 KIF22Q14807 665 aa10.87□□□□□ -0.67
PLXNB1-219ENST00000497627 TDRD3Q9H7E2 651 aaKnown RBP10.87□□□□□ -0.67
PLXNB1-219ENST00000497627 ZNF70Q9UC06 446 aaPredicted RBP10.87□□□□□ -0.67
PLXNB1-219ENST00000497627 TCP10L2B9ZVM9 353 aa10.86□□□□□ -0.67
PLXNB1-219ENST00000497627 H7C1W4 665 aa10.86□□□□□ -0.67
PLXNB1-219ENST00000497627 TLR2O60603 784 aa10.86□□□□□ -0.67
PLXNB1-219ENST00000497627 MAP3K9P80192 1104 aa10.86□□□□□ -0.67
PLXNB1-219ENST00000497627 TNFAIP1Q13829 316 aa10.86□□□□□ -0.67
PLXNB1-219ENST00000497627 SPDYE2Q495Y8 402 aa10.86□□□□□ -0.67
PLXNB1-219ENST00000497627 CCDC30Q5VVM6 783 aa10.86□□□□□ -0.67
PLXNB1-219ENST00000497627 ZNF804AQ7Z570 1209 aa10.86□□□□□ -0.67
PLXNB1-219ENST00000497627 TSPYL6Q8N831 410 aa10.86□□□□□ -0.67
PLXNB1-219ENST00000497627 TEPSINQ96N21 525 aa10.86□□□□□ -0.67
PLXNB1-219ENST00000497627 TMEM39BQ9GZU3 492 aa10.86□□□□□ -0.67
PLXNB1-219ENST00000497627 CSADQ9Y600 493 aa10.86□□□□□ -0.67
PLXNB1-219ENST00000497627 BTBD19C9JJ37 291 aa10.85□□□□□ -0.67
PLXNB1-219ENST00000497627 SOX1O00570 391 aaPredicted RBP10.85□□□□□ -0.67
PLXNB1-219ENST00000497627 IL1R1P14778 569 aa10.85□□□□□ -0.67
PLXNB1-219ENST00000497627 CTGFP29279 349 aa10.85□□□□□ -0.67
PLXNB1-219ENST00000497627 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.85□□□□□ -0.67
PLXNB1-219ENST00000497627 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.85□□□□□ -0.674e-7■■□□□ 11.9
PLXNB1-219ENST00000497627 PLA2G12BQ9BX93 195 aa10.85□□□□□ -0.67
PLXNB1-219ENST00000497627 PRO3102Q9H379 93 aa10.85□□□□□ -0.67
PLXNB1-219ENST00000497627 IFT57Q9NWB7 429 aa10.85□□□□□ -0.67
PLXNB1-219ENST00000497627 ANKRD18BA2A2Z9 1011 aa10.84□□□□□ -0.67
PLXNB1-219ENST00000497627 PLIN1O60240 522 aa10.84□□□□□ -0.67
PLXNB1-219ENST00000497627 WDHD1O75717 1129 aaPredicted RBP10.84□□□□□ -0.67
PLXNB1-219ENST00000497627 CSF1RP07333 972 aa10.84□□□□□ -0.67
PLXNB1-219ENST00000497627 FKBP1AP62942 108 aaKnown RBP10.84□□□□□ -0.67
PLXNB1-219ENST00000497627 GNAI1P63096 354 aa10.84□□□□□ -0.67
PLXNB1-219ENST00000497627 C15orf52Q6ZUT6 534 aaKnown RBP10.84□□□□□ -0.67
PLXNB1-219ENST00000497627 G2E3Q7L622 706 aa10.84□□□□□ -0.67
PLXNB1-219ENST00000497627 LRCH3Q96II8 777 aa10.84□□□□□ -0.67
PLXNB1-219ENST00000497627 HTATIP2Q9BUP3 242 aa10.84□□□□□ -0.67
PLXNB1-219ENST00000497627 CPA4Q9UI42 421 aa10.84□□□□□ -0.67
PLXNB1-219ENST00000497627 TTF2Q9UNY4 1162 aaKnown RBP10.84□□□□□ -0.67
PLXNB1-219ENST00000497627 MGAMO43451 1857 aa10.83□□□□□ -0.68
PLXNB1-219ENST00000497627 SPDYE5A6NIY4 337 aa10.83□□□□□ -0.68
PLXNB1-219ENST00000497627 ZBTB7BO15156 539 aaPredicted RBP10.83□□□□□ -0.68
PLXNB1-219ENST00000497627 GNRH1P01148 92 aa10.83□□□□□ -0.68
PLXNB1-219ENST00000497627 CETPP11597 493 aa10.83□□□□□ -0.68
PLXNB1-219ENST00000497627 CCL5P13501 91 aa10.83□□□□□ -0.68
PLXNB1-219ENST00000497627 GRK4P32298 578 aa10.83□□□□□ -0.68
PLXNB1-219ENST00000497627 PSMC4P43686 418 aa10.83□□□□□ -0.68
PLXNB1-219ENST00000497627 CASP7P55210 303 aa10.83□□□□□ -0.68
PLXNB1-219ENST00000497627 PRMT2P55345 433 aa10.83□□□□□ -0.68
PLXNB1-219ENST00000497627 GCKRQ14397 625 aa10.83□□□□□ -0.68
PLXNB1-219ENST00000497627 MFSD14BQ5SR56 506 aa10.83□□□□□ -0.68
PLXNB1-219ENST00000497627 UBE2Q1Q7Z7E8 422 aa10.83□□□□□ -0.68
PLXNB1-219ENST00000497627 DZIP1LQ8IYY4 767 aaKnown RBP10.83□□□□□ -0.68
PLXNB1-219ENST00000497627 NKX2-3Q8TAU0 364 aa10.83□□□□□ -0.68
PLXNB1-219ENST00000497627 RAET1EQ8TD07 263 aa10.83□□□□□ -0.68
PLXNB1-219ENST00000497627 CDCA7LQ96GN5 454 aa10.83□□□□□ -0.68
PLXNB1-219ENST00000497627 TRIM47Q96LD4 638 aa10.83□□□□□ -0.68
PLXNB1-219ENST00000497627 RNF208Q9H0X6 261 aa10.83□□□□□ -0.68
PLXNB1-219ENST00000497627 BIN2Q9UBW5 565 aaPredicted RBP10.83□□□□□ -0.68
PLXNB1-219ENST00000497627 SRRDQ9UH36 339 aa10.83□□□□□ -0.68
PLXNB1-219ENST00000497627 CHMP3Q9Y3E7 222 aa10.83□□□□□ -0.68
PLXNB1-219ENST00000497627 SNCAIPQ9Y6H5 919 aa10.83□□□□□ -0.68
PLXNB1-219ENST00000497627 ALPK3Q96L96 1907 aa10.82□□□□□ -0.68
PLXNB1-219ENST00000497627 APAF1O14727 1248 aa10.82□□□□□ -0.68
PLXNB1-219ENST00000497627 IRF6O14896 467 aa10.82□□□□□ -0.68
PLXNB1-219ENST00000497627 FARP2O94887 1054 aaPredicted RBP10.82□□□□□ -0.68
PLXNB1-219ENST00000497627 GJB1P08034 283 aa10.82□□□□□ -0.68
PLXNB1-219ENST00000497627 OSBPP22059 807 aa10.82□□□□□ -0.68
PLXNB1-219ENST00000497627 GJA8P48165 433 aa10.82□□□□□ -0.68
PLXNB1-219ENST00000497627 TNNI2P48788 182 aa10.82□□□□□ -0.68
PLXNB1-219ENST00000497627 CACNB3P54284 484 aa10.82□□□□□ -0.68
PLXNB1-219ENST00000497627 ERO1BQ86YB8 467 aa10.82□□□□□ -0.68
PLXNB1-219ENST00000497627 ZKSCAN4Q969J2 545 aaPredicted RBP10.82□□□□□ -0.68
PLXNB1-219ENST00000497627 WRNIP1Q96S55 665 aa10.82□□□□□ -0.68
PLXNB1-219ENST00000497627 STK31Q9BXU1 1019 aa10.82□□□□□ -0.68
PLXNB1-219ENST00000497627 SERPINA10Q9UK55 444 aa10.82□□□□□ -0.68
PLXNB1-219ENST00000497627 RIPOR2Q9Y4F9 1068 aa10.82□□□□□ -0.68
PLXNB1-219ENST00000497627 NR2E3Q9Y5X4 410 aa10.82□□□□□ -0.68
PLXNB1-219ENST00000497627 AK9Q5TCS8 1911 aa10.82□□□□□ -0.68
PLXNB1-219ENST00000497627 FMNL1O95466 1100 aaPredicted RBP10.81□□□□□ -0.68
PLXNB1-219ENST00000497627 CRKP46108 304 aa10.81□□□□□ -0.68
PLXNB1-219ENST00000497627 IFIT5Q13325 482 aaKnown RBP10.81□□□□□ -0.68
PLXNB1-219ENST00000497627 SNAPC2Q13487 334 aa10.81□□□□□ -0.68
PLXNB1-219ENST00000497627 GRIK5Q16478 980 aa10.81□□□□□ -0.68
PLXNB1-219ENST00000497627 C17orf99Q6UX52 265 aa10.81□□□□□ -0.68
PLXNB1-219ENST00000497627 ZNF594Q96JF6 807 aaPredicted RBP10.81□□□□□ -0.68
PLXNB1-219ENST00000497627 ZCCHC17Q9NP64 241 aaKnown RBP10.81□□□□□ -0.68
PLXNB1-219ENST00000497627 FAM205AQ6ZU69 1335 aa10.81□□□□□ -0.68
PLXNB1-219ENST00000497627 MYPNQ86TC9 1320 aa10.81□□□□□ -0.68
PLXNB1-219ENST00000497627 RANBP2P49792 3224 aaKnown RBP10.8□□□□□ -0.68
PLXNB1-219ENST00000497627 HOXD10P28358 340 aa10.8□□□□□ -0.68
PLXNB1-219ENST00000497627 GYG1P46976 350 aa10.8□□□□□ -0.68
PLXNB1-219ENST00000497627 CALD1Q05682 793 aaKnown RBP10.8□□□□□ -0.68
PLXNB1-219ENST00000497627 SLFN5Q08AF3 891 aa10.8□□□□□ -0.68
PLXNB1-219ENST00000497627 U2AF1L4Q8WU68 220 aaKnown RBP10.8□□□□□ -0.68
PLXNB1-219ENST00000497627 TSR2Q969E8 191 aaKnown RBP10.8□□□□□ -0.68
PLXNB1-219ENST00000497627 UNC93B1Q9H1C4 597 aa10.8□□□□□ -0.68
PLXNB1-219ENST00000497627 MYH16Q9H6N6 1097 aa10.8□□□□□ -0.68
PLXNB1-219ENST00000497627 STAP2Q9UGK3 403 aa10.8□□□□□ -0.68
PLXNB1-219ENST00000497627 FANCIQ9NVI1 1328 aa10.8□□□□□ -0.68
PLXNB1-219ENST00000497627 CUL9Q8IWT3 2517 aa10.8□□□□□ -0.68
PLXNB1-219ENST00000497627 DOCK3Q8IZD9 2030 aa10.79□□□□□ -0.68
PLXNB1-219ENST00000497627 E9PSI1 815 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms