RNA–Protein interactions for RNA: ENST00000497091.1

PBX3-211, Transcript of PBX homeobox 3, humanhuman

TSL 5

Gene PBX3, Length 425 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-211ENST00000497091 USP48Q86UV5 1035 aa23.33■■□□□ 1.33
PBX3-211ENST00000497091 ZBED3Q96IU2 234 aaPredicted RBP23.33■■□□□ 1.33
PBX3-211ENST00000497091 PRMT6Q96LA8 375 aaPredicted RBP23.33■■□□□ 1.33
PBX3-211ENST00000497091 SNRKQ9NRH2 765 aa23.33■■□□□ 1.33
PBX3-211ENST00000497091 MAST3O60307 1309 aa23.33■■□□□ 1.32
PBX3-211ENST00000497091 ASTN2O75129 1339 aaPredicted RBP23.33■■□□□ 1.32
PBX3-211ENST00000497091 MYO1BO43795 1136 aa23.32■■□□□ 1.32
PBX3-211ENST00000497091 PI16Q6UXB8 463 aa23.32■■□□□ 1.32
PBX3-211ENST00000497091 KRT26Q7Z3Y9 468 aa23.32■■□□□ 1.32
PBX3-211ENST00000497091 TEKT1Q969V4 418 aa23.32■■□□□ 1.32
PBX3-211ENST00000497091 GGA3Q9NZ52 723 aa23.32■■□□□ 1.32
PBX3-211ENST00000497091 COL1A1P02452 1464 aaPredicted RBP23.31■■□□□ 1.32
PBX3-211ENST00000497091 SPDYE2BA6NHP3 402 aa23.31■■□□□ 1.32
PBX3-211ENST00000497091 SPDYE6P0CI01 402 aa23.31■■□□□ 1.32
PBX3-211ENST00000497091 PRDX5P30044 214 aa23.31■■□□□ 1.32
PBX3-211ENST00000497091 SULF1Q8IWU6 871 aa23.31■■□□□ 1.32
PBX3-211ENST00000497091 GCC1Q96CN9 775 aa23.31■■□□□ 1.32
PBX3-211ENST00000497091 GLIS2Q9BZE0 524 aaPredicted RBP23.31■■□□□ 1.32
PBX3-211ENST00000497091 ZBTB47Q9UFB7 747 aaPredicted RBP23.31■■□□□ 1.32
PBX3-211ENST00000497091 PCDHAC2Q9Y5I4 1007 aa23.31■■□□□ 1.32
PBX3-211ENST00000497091 TBC1D9Q6ZT07 1266 aa23.3■■□□□ 1.32
PBX3-211ENST00000497091 ERICH6Q7L0X2 663 aa23.3■■□□□ 1.32
PBX3-211ENST00000497091 TRAF5O00463 557 aa23.29■■□□□ 1.32
PBX3-211ENST00000497091 CENPBP07199 599 aaPredicted RBP23.29■■□□□ 1.32
PBX3-211ENST00000497091 HHIPL2Q6UWX4 724 aa23.29■■□□□ 1.32
PBX3-211ENST00000497091 LRP2BPQ9P2M1 347 aa23.29■■□□□ 1.32
PBX3-211ENST00000497091 PASKQ96RG2 1323 aa23.29■■□□□ 1.32
PBX3-211ENST00000497091 PITPNM2Q9BZ72 1349 aa23.29■■□□□ 1.32
PBX3-211ENST00000497091 IGHDP01880 384 aa23.28■■□□□ 1.32
PBX3-211ENST00000497091 ZAP70P43403 619 aa23.28■■□□□ 1.32
PBX3-211ENST00000497091 ANKRD45Q5TZF3 282 aa23.28■■□□□ 1.32
PBX3-211ENST00000497091 DZIP1Q86YF9 867 aaKnown RBP23.28■■□□□ 1.32
PBX3-211ENST00000497091 KLRG1Q96E93 195 aa23.28■■□□□ 1.32
PBX3-211ENST00000497091 ZDHHC15Q96MV8 337 aa23.28■■□□□ 1.32
PBX3-211ENST00000497091 ADAMTSL1Q8N6G6 1762 aa23.27■■□□□ 1.32
PBX3-211ENST00000497091 CYP2E1P05181 493 aaPredicted RBP23.27■■□□□ 1.32
PBX3-211ENST00000497091 SLF2Q8IX21 1173 aa23.27■■□□□ 1.32
PBX3-211ENST00000497091 RAI14Q9P0K7 980 aa23.27■■□□□ 1.32
PBX3-211ENST00000497091 ARAP2Q8WZ64 1704 aa23.27■■□□□ 1.32
PBX3-211ENST00000497091 ZNF646O15015 1829 aaPredicted RBP23.26■■□□□ 1.31
PBX3-211ENST00000497091 CLRN2A0PK11 232 aa23.26■■□□□ 1.31
PBX3-211ENST00000497091 ADM5C9JUS6 153 aa23.26■■□□□ 1.31
PBX3-211ENST00000497091 FMR1Q06787 632 aaKnown RBP eCLIP23.26■■□□□ 1.31
PBX3-211ENST00000497091 DIXDC1Q155Q3 683 aa23.26■■□□□ 1.31
PBX3-211ENST00000497091 JMYQ8N9B5 988 aa23.26■■□□□ 1.31
PBX3-211ENST00000497091 TDRD3Q9H7E2 651 aaKnown RBP23.26■■□□□ 1.31
PBX3-211ENST00000497091 ATP5JP18859 108 aa23.25■■□□□ 1.31
PBX3-211ENST00000497091 MECOMQ03112 1051 aa23.25■■□□□ 1.31
PBX3-211ENST00000497091 APOBEC3HQ6NTF7 200 aaKnown RBP23.25■■□□□ 1.31
PBX3-211ENST00000497091 DLK2Q6UY11 383 aa23.25■■□□□ 1.31
PBX3-211ENST00000497091 APOBEC3FQ8IUX4 373 aaKnown RBP23.25■■□□□ 1.31
PBX3-211ENST00000497091 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.25■■□□□ 1.31
PBX3-211ENST00000497091 SCAF8Q9UPN6 1271 aaKnown RBP23.25■■□□□ 1.31
PBX3-211ENST00000497091 LDHCP07864 332 aa23.24■■□□□ 1.31
PBX3-211ENST00000497091 GSTO1P78417 241 aa23.24■■□□□ 1.31
PBX3-211ENST00000497091 GPATCH3Q96I76 525 aa23.24■■□□□ 1.31
PBX3-211ENST00000497091 VEZTQ9HBM0 779 aa23.24■■□□□ 1.31
PBX3-211ENST00000497091 ZNF70Q9UC06 446 aaPredicted RBP23.24■■□□□ 1.31
PBX3-211ENST00000497091 TMEM88BA6NKF7 163 aa23.23■■□□□ 1.31
PBX3-211ENST00000497091 HTRA3P83110 453 aa23.23■■□□□ 1.31
PBX3-211ENST00000497091 SPDYE2Q495Y8 402 aa23.23■■□□□ 1.31
PBX3-211ENST00000497091 SMC5Q8IY18 1101 aa23.23■■□□□ 1.31
PBX3-211ENST00000497091 FAM163AQ96GL9 167 aaPredicted RBP23.23■■□□□ 1.31
PBX3-211ENST00000497091 BOLA2Q9H3K6 86 aa23.23■■□□□ 1.31
PBX3-211ENST00000497091 ECHDC1Q9NTX5 307 aa23.23■■□□□ 1.31
PBX3-211ENST00000497091 DAGLAQ9Y4D2 1042 aa23.23■■□□□ 1.31
PBX3-211ENST00000497091 AOX1Q06278 1338 aa23.23■■□□□ 1.31
PBX3-211ENST00000497091 IGSF3O75054 1194 aa23.22■■□□□ 1.31
PBX3-211ENST00000497091 CELF2O95319 508 aaKnown RBP23.22■■□□□ 1.31
PBX3-211ENST00000497091 CST9Q5W186 159 aa23.22■■□□□ 1.31
PBX3-211ENST00000497091 NSUN4Q96CB9 384 aaKnown RBP23.22■■□□□ 1.31
PBX3-211ENST00000497091 ZNF408Q9H9D4 720 aa23.22■■□□□ 1.31
PBX3-211ENST00000497091 PIH1D3Q9NQM4 214 aaKnown RBP23.22■■□□□ 1.31
PBX3-211ENST00000497091 NDUFB9Q9Y6M9 179 aa23.22■■□□□ 1.31
PBX3-211ENST00000497091 TTF1Q15361 905 aaPredicted RBP23.21■■□□□ 1.31
PBX3-211ENST00000497091 B4GALNT3Q6L9W6 998 aa23.21■■□□□ 1.31
PBX3-211ENST00000497091 DNAJC2Q99543 621 aaKnown RBP23.21■■□□□ 1.31
PBX3-211ENST00000497091 DEFB129Q9H1M3 183 aa23.21■■□□□ 1.31
PBX3-211ENST00000497091 ANTXR1Q9H6X2 564 aa23.21■■□□□ 1.31
PBX3-211ENST00000497091 CREBZFQ9NS37 354 aa23.21■■□□□ 1.31
PBX3-211ENST00000497091 TMOD2Q9NZR1 351 aa23.21■■□□□ 1.31
PBX3-211ENST00000497091 IDH1O75874 414 aaKnown RBP23.2■■□□□ 1.3
PBX3-211ENST00000497091 PRAMEF18Q5VWM3 479 aa23.2■■□□□ 1.3
PBX3-211ENST00000497091 CDCA5Q96FF9 252 aa23.2■■□□□ 1.3
PBX3-211ENST00000497091 USP40Q9NVE5 1235 aa23.2■■□□□ 1.3
PBX3-211ENST00000497091 GAKO14976 1311 aa23.19■■□□□ 1.3
PBX3-211ENST00000497091 TCP10L2B9ZVM9 353 aa23.19■■□□□ 1.3
PBX3-211ENST00000497091 GOLIM4O00461 696 aa23.19■■□□□ 1.3
PBX3-211ENST00000497091 MAP3K12Q12852 859 aa23.19■■□□□ 1.3
PBX3-211ENST00000497091 TNFAIP1Q13829 316 aa23.19■■□□□ 1.3
PBX3-211ENST00000497091 NAA16Q6N069 864 aaPredicted RBP23.19■■□□□ 1.3
PBX3-211ENST00000497091 ZNF384Q8TF68 577 aa23.19■■□□□ 1.3
PBX3-211ENST00000497091 HAUS7Q99871 368 aa23.19■■□□□ 1.3
PBX3-211ENST00000497091 MROH7-TTC4A0A0A0MT08 1334 aa23.18■■□□□ 1.3
PBX3-211ENST00000497091 TNNI2P48788 182 aa23.18■■□□□ 1.3
PBX3-211ENST00000497091 RASA3Q14644 834 aa23.18■■□□□ 1.3
PBX3-211ENST00000497091 CDC42EP5Q6NZY7 148 aa23.18■■□□□ 1.3
PBX3-211ENST00000497091 PPP2R3BQ9Y5P8 575 aa23.18■■□□□ 1.3
PBX3-211ENST00000497091 GPR75-ASB3A0A0A6YYF3 556 aa23.17■■□□□ 1.3
PBX3-211ENST00000497091 CACNB3P54284 484 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms