RNA–Protein interactions for RNA: ENST00000497089.1

HOXA9-206, Transcript of homeobox A9, humanhuman

TSL 1 (best)

Gene HOXA9, Length 1,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-206ENST00000497089 ZBTB1Q9Y2K1 713 aa8.46□□□□□ -1.06
HOXA9-206ENST00000497089 PCDHB11Q9Y5F2 797 aa8.46□□□□□ -1.06
HOXA9-206ENST00000497089 COL15A1P39059 1388 aa8.45□□□□□ -1.06
HOXA9-206ENST00000497089 DLG5Q8TDM6 1919 aa8.45□□□□□ -1.06
HOXA9-206ENST00000497089 NRXN2Q9P2S2 1712 aa8.45□□□□□ -1.06
HOXA9-206ENST00000497089 USP17L15C9J2P7 530 aa8.45□□□□□ -1.06
HOXA9-206ENST00000497089 PATL2C9JE40 543 aaKnown RBP8.45□□□□□ -1.06
HOXA9-206ENST00000497089 USP17L10C9JJH3 530 aa8.45□□□□□ -1.06
HOXA9-206ENST00000497089 USP17L13C9JLJ4 530 aa8.45□□□□□ -1.06
HOXA9-206ENST00000497089 USP17L12C9JPN9 530 aa8.45□□□□□ -1.06
HOXA9-206ENST00000497089 USP17L11C9JVI0 530 aa8.45□□□□□ -1.06
HOXA9-206ENST00000497089 USP17L21D6R901 530 aa8.45□□□□□ -1.06
HOXA9-206ENST00000497089 USP17L18D6R9N7 530 aa8.45□□□□□ -1.06
HOXA9-206ENST00000497089 USP17L22D6RA61 530 aa8.45□□□□□ -1.06
HOXA9-206ENST00000497089 USP17L17D6RBQ6 530 aa8.45□□□□□ -1.06
HOXA9-206ENST00000497089 USP17L19D6RCP7 530 aa8.45□□□□□ -1.06
HOXA9-206ENST00000497089 USP17L20D6RJB6 530 aa8.45□□□□□ -1.06
HOXA9-206ENST00000497089 DDR1Q08345 913 aa8.45□□□□□ -1.06
HOXA9-206ENST00000497089 USP17L24Q0WX57 530 aa8.45□□□□□ -1.06
HOXA9-206ENST00000497089 USP4Q13107 963 aa8.45□□□□□ -1.06
HOXA9-206ENST00000497089 NARFQ9UHQ1 456 aa8.45□□□□□ -1.06
HOXA9-206ENST00000497089 PARP3Q9Y6F1 533 aa8.45□□□□□ -1.06
HOXA9-206ENST00000497089 GOLGB1Q14789 3259 aaKnown RBP8.44□□□□□ -1.06
HOXA9-206ENST00000497089 N4BP2Q86UW6 1770 aaPredicted RBP8.44□□□□□ -1.06
HOXA9-206ENST00000497089 BTBD11A6QL63 1104 aa8.44□□□□□ -1.06
HOXA9-206ENST00000497089 OGFOD1Q8N543 542 aa8.44□□□□□ -1.06
HOXA9-206ENST00000497089 FAM200AQ8TCP9 573 aa8.44□□□□□ -1.06
HOXA9-206ENST00000497089 RTF1Q92541 710 aaKnown RBP8.44□□□□□ -1.06
HOXA9-206ENST00000497089 PNNQ9H307 717 aaKnown RBP8.44□□□□□ -1.06
HOXA9-206ENST00000497089 KDM3BQ7LBC6 1761 aa8.43□□□□□ -1.06
HOXA9-206ENST00000497089 A0A087WZG4 1122 aa8.43□□□□□ -1.06
HOXA9-206ENST00000497089 POLRMTO00411 1230 aaKnown RBP8.43□□□□□ -1.06
HOXA9-206ENST00000497089 KCNQ3O43525 872 aa8.43□□□□□ -1.06
HOXA9-206ENST00000497089 MYCP01106 439 aaPredicted RBP8.43□□□□□ -1.06
HOXA9-206ENST00000497089 TIMP2P16035 220 aa8.43□□□□□ -1.06
HOXA9-206ENST00000497089 KCNA3P22001 575 aa8.43□□□□□ -1.06
HOXA9-206ENST00000497089 IL6STP40189 918 aaPredicted RBP8.43□□□□□ -1.06
HOXA9-206ENST00000497089 WDR4P57081 412 aaKnown RBP8.43□□□□□ -1.06
HOXA9-206ENST00000497089 DDX10Q13206 875 aaKnown RBP8.43□□□□□ -1.06
HOXA9-206ENST00000497089 PTK7Q13308 1070 aa8.43□□□□□ -1.06
HOXA9-206ENST00000497089 CRTC2Q53ET0 693 aaPredicted RBP8.43□□□□□ -1.06
HOXA9-206ENST00000497089 USPL1Q5W0Q7 1092 aa8.43□□□□□ -1.06
HOXA9-206ENST00000497089 MCM10Q7L590 875 aa8.43□□□□□ -1.06
HOXA9-206ENST00000497089 DNAAF2Q9NVR5 837 aaKnown RBP8.43□□□□□ -1.06
HOXA9-206ENST00000497089 PGPEP1Q9NXJ5 209 aa8.43□□□□□ -1.06
HOXA9-206ENST00000497089 AFDNP55196 1824 aaKnown RBP8.43□□□□□ -1.06
HOXA9-206ENST00000497089 ARFGEF1Q9Y6D6 1849 aa8.43□□□□□ -1.06
HOXA9-206ENST00000497089 SCN7AQ01118 1682 aa8.43□□□□□ -1.06
HOXA9-206ENST00000497089 BRD1O95696 1058 aa8.42□□□□□ -1.06
HOXA9-206ENST00000497089 NEFMP07197 916 aa8.42□□□□□ -1.06
HOXA9-206ENST00000497089 SNRPA1P09661 255 aaKnown RBP8.42□□□□□ -1.06
HOXA9-206ENST00000497089 CANXP27824 592 aaKnown RBP8.42□□□□□ -1.06
HOXA9-206ENST00000497089 NFIXQ14938 502 aa8.42□□□□□ -1.06
HOXA9-206ENST00000497089 TAF7Q15545 349 aaPredicted RBP8.42□□□□□ -1.06
HOXA9-206ENST00000497089 B4GALNT3Q6L9W6 998 aa8.42□□□□□ -1.06
HOXA9-206ENST00000497089 ITPKCQ96DU7 683 aa8.42□□□□□ -1.06
HOXA9-206ENST00000497089 TMPRSS4Q9NRS4 437 aa8.42□□□□□ -1.06
HOXA9-206ENST00000497089 ADCY9O60503 1353 aa8.42□□□□□ -1.06
HOXA9-206ENST00000497089 MYBBP1AQ9BQG0 1328 aaKnown RBP8.41□□□□□ -1.06
HOXA9-206ENST00000497089 A0A0G2JLW4 131 aa8.41□□□□□ -1.06
HOXA9-206ENST00000497089 TMEM88BA6NKF7 163 aa8.41□□□□□ -1.06
HOXA9-206ENST00000497089 ZIC2O95409 532 aaPredicted RBP8.41□□□□□ -1.06
HOXA9-206ENST00000497089 A1BGP04217 495 aa8.41□□□□□ -1.06
HOXA9-206ENST00000497089 DPEP1P16444 411 aa8.41□□□□□ -1.06
HOXA9-206ENST00000497089 SMCPP49901 116 aaPredicted RBP8.41□□□□□ -1.06
HOXA9-206ENST00000497089 GTF2IP78347 998 aa8.41□□□□□ -1.06
HOXA9-206ENST00000497089 DCTN1Q14203 1278 aa8.41□□□□□ -1.06
HOXA9-206ENST00000497089 NFE2L2Q16236 605 aa8.41□□□□□ -1.06
HOXA9-206ENST00000497089 CTC1Q2NKJ3 1217 aa8.41□□□□□ -1.06
HOXA9-206ENST00000497089 ANKMY2Q8IV38 441 aa8.41□□□□□ -1.06
HOXA9-206ENST00000497089 LARGE2Q8N3Y3 721 aa8.41□□□□□ -1.06
HOXA9-206ENST00000497089 PNISRQ8TF01 805 aaKnown RBP8.41□□□□□ -1.06
HOXA9-206ENST00000497089 ZNF594Q96JF6 807 aaPredicted RBP8.41□□□□□ -1.06
HOXA9-206ENST00000497089 ZMIZ1Q9ULJ6 1067 aa8.41□□□□□ -1.06
HOXA9-206ENST00000497089 LAMB4A4D0S4 1761 aa8.41□□□□□ -1.06
HOXA9-206ENST00000497089 BCORQ6W2J9 1755 aa8.41□□□□□ -1.06
HOXA9-206ENST00000497089 DLEC1Q9Y238 1755 aa8.41□□□□□ -1.06
HOXA9-206ENST00000497089 CARNS1A5YM72 827 aa8.4□□□□□ -1.06
HOXA9-206ENST00000497089 TMEM164Q5U3C3 297 aa8.4□□□□□ -1.06
HOXA9-206ENST00000497089 CRIPAKQ8N1N5 446 aa8.4□□□□□ -1.06
HOXA9-206ENST00000497089 STK32AQ8WU08 396 aa8.4□□□□□ -1.06
HOXA9-206ENST00000497089 ZFAND3Q9H8U3 227 aa8.4□□□□□ -1.06
HOXA9-206ENST00000497089 USP16Q9Y5T5 823 aa8.4□□□□□ -1.06
HOXA9-206ENST00000497089 MAPK8IP3Q9UPT6 1336 aa8.4□□□□□ -1.07
HOXA9-206ENST00000497089 LILRA1O75019 489 aa8.39□□□□□ -1.07
HOXA9-206ENST00000497089 CAMTA2O94983 1202 aa8.39□□□□□ -1.07
HOXA9-206ENST00000497089 SERPINB2P05120 415 aa8.39□□□□□ -1.07
HOXA9-206ENST00000497089 ERVK-9P63128 1117 aa8.39□□□□□ -1.07
HOXA9-206ENST00000497089 CLDN10P78369 228 aa8.39□□□□□ -1.07
HOXA9-206ENST00000497089 KCNA1Q09470 495 aa8.39□□□□□ -1.07
HOXA9-206ENST00000497089 DPYDQ12882 1025 aa8.39□□□□□ -1.07
HOXA9-206ENST00000497089 PRKRIP1Q9H875 184 aaPredicted RBP8.39□□□□□ -1.07
HOXA9-206ENST00000497089 PIM2Q9P1W9 311 aa8.39□□□□□ -1.07
HOXA9-206ENST00000497089 ATP10DQ9P241 1426 aa8.39□□□□□ -1.07
HOXA9-206ENST00000497089 CARMIL3Q8ND23 1372 aa8.38□□□□□ -1.07
HOXA9-206ENST00000497089 PRAMEF22A3QJZ6 481 aa8.38□□□□□ -1.07
HOXA9-206ENST00000497089 CAPN5O15484 640 aaPredicted RBP8.38□□□□□ -1.07
HOXA9-206ENST00000497089 RRP9O43818 475 aaKnown RBP8.38□□□□□ -1.07
HOXA9-206ENST00000497089 EIF4A1P60842 406 aaKnown RBP8.38□□□□□ -1.07
HOXA9-206ENST00000497089 NBPF10Q6P3W6 841 aaKnown RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms