RNA–Protein interactions for RNA: ENST00000497055.1

SGIP1-214, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 2

Gene SGIP1, Length 402 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-214ENST00000497055 CLDN10P78369 228 aa6.57□□□□□ -1.36
SGIP1-214ENST00000497055 PKN2Q16513 984 aaKnown RBP6.57□□□□□ -1.36
SGIP1-214ENST00000497055 TRAPPC3LQ5T215 181 aa6.57□□□□□ -1.36
SGIP1-214ENST00000497055 MPRIPQ6WCQ1 1025 aa6.57□□□□□ -1.36
SGIP1-214ENST00000497055 LARGE2Q8N3Y3 721 aa6.57□□□□□ -1.36
SGIP1-214ENST00000497055 CCDC82Q8N4S0 544 aa6.57□□□□□ -1.36
SGIP1-214ENST00000497055 TTLL6Q8N841 843 aa6.57□□□□□ -1.36
SGIP1-214ENST00000497055 ETNK1Q9HBU6 452 aa6.57□□□□□ -1.36
SGIP1-214ENST00000497055 HDAC9Q9UKV0 1011 aa6.57□□□□□ -1.36
SGIP1-214ENST00000497055 HRH3Q9Y5N1 445 aa6.57□□□□□ -1.36
SGIP1-214ENST00000497055 SCN4AP35499 1836 aa6.57□□□□□ -1.36
SGIP1-214ENST00000497055 ADAMTSL1Q8N6G6 1762 aa6.57□□□□□ -1.36
SGIP1-214ENST00000497055 STAU1O95793 577 aaKnown RBP6.56□□□□□ -1.36
SGIP1-214ENST00000497055 CENPCQ03188 943 aa6.56□□□□□ -1.36
SGIP1-214ENST00000497055 NOGQ13253 232 aa6.56□□□□□ -1.36
SGIP1-214ENST00000497055 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.56□□□□□ -1.36
SGIP1-214ENST00000497055 FOXD4L5Q5VV16 416 aaPredicted RBP6.56□□□□□ -1.36
SGIP1-214ENST00000497055 SAPCD2Q86UD0 394 aa6.56□□□□□ -1.36
SGIP1-214ENST00000497055 RNF217Q8TC41 542 aa6.56□□□□□ -1.36
SGIP1-214ENST00000497055 ANKRD24Q8TF21 1146 aa6.56□□□□□ -1.36
SGIP1-214ENST00000497055 SMARCC1Q92922 1105 aaPredicted RBP6.56□□□□□ -1.36
SGIP1-214ENST00000497055 SAGE1Q9NXZ1 904 aa6.56□□□□□ -1.36
SGIP1-214ENST00000497055 DNMT3LQ9UJW3 386 aa6.56□□□□□ -1.36
SGIP1-214ENST00000497055 ROCK1Q13464 1354 aa6.56□□□□□ -1.36
SGIP1-214ENST00000497055 RNF123Q5XPI4 1314 aa6.55□□□□□ -1.36
SGIP1-214ENST00000497055 TMEM229AB2RXF0 380 aa6.55□□□□□ -1.36
SGIP1-214ENST00000497055 DDR1Q08345 913 aa6.55□□□□□ -1.36
SGIP1-214ENST00000497055 CCDC102BQ68D86 513 aa6.55□□□□□ -1.36
SGIP1-214ENST00000497055 BICDL1Q6ZP65 573 aa6.55□□□□□ -1.36
SGIP1-214ENST00000497055 SYNE4Q8N205 404 aa6.55□□□□□ -1.36
SGIP1-214ENST00000497055 ZCRB1Q8TBF4 217 aaKnown RBP6.55□□□□□ -1.36
SGIP1-214ENST00000497055 SLC4A9Q96Q91 983 aa6.55□□□□□ -1.36
SGIP1-214ENST00000497055 GRIP2Q9C0E4 1043 aa6.55□□□□□ -1.36
SGIP1-214ENST00000497055 RNF186Q9NXI6 227 aa6.55□□□□□ -1.36
SGIP1-214ENST00000497055 LOC102724428A0A0B4J2F2 783 aa6.54□□□□□ -1.36
SGIP1-214ENST00000497055 FAM196BA6NMK8 535 aa6.54□□□□□ -1.36
SGIP1-214ENST00000497055 SOBPA7XYQ1 873 aa6.54□□□□□ -1.36
SGIP1-214ENST00000497055 BACH1O14867 736 aa6.54□□□□□ -1.36
SGIP1-214ENST00000497055 CELF2O95319 508 aaKnown RBP6.54□□□□□ -1.36
SGIP1-214ENST00000497055 RFC4P35249 363 aa6.54□□□□□ -1.36
SGIP1-214ENST00000497055 SIK1P57059 783 aa6.54□□□□□ -1.36
SGIP1-214ENST00000497055 SRPK2P78362 688 aaKnown RBP6.54□□□□□ -1.36
SGIP1-214ENST00000497055 PTK7Q13308 1070 aa6.54□□□□□ -1.36
SGIP1-214ENST00000497055 CDCA8Q53HL2 280 aa6.54□□□□□ -1.36
SGIP1-214ENST00000497055 FBXO46Q6PJ61 603 aaPredicted RBP6.54□□□□□ -1.36
SGIP1-214ENST00000497055 LYSMD3Q7Z3D4 306 aa6.54□□□□□ -1.36
SGIP1-214ENST00000497055 SIX5Q8N196 739 aa6.54□□□□□ -1.36
SGIP1-214ENST00000497055 TPCN2Q8NHX9 752 aa6.54□□□□□ -1.36
SGIP1-214ENST00000497055 SERTAD1Q9UHV2 236 aa6.54□□□□□ -1.36
SGIP1-214ENST00000497055 KIAA1024Q9UPX6 916 aa6.54□□□□□ -1.36
SGIP1-214ENST00000497055 RTCBQ9Y3I0 505 aaKnown RBP6.54□□□□□ -1.36
SGIP1-214ENST00000497055 RBM19Q9Y4C8 960 aaKnown RBP6.54□□□□□ -1.36
SGIP1-214ENST00000497055 DICER1Q9UPY3 1922 aaKnown RBP6.54□□□□□ -1.36
SGIP1-214ENST00000497055 MKI67P46013 3256 aaKnown RBP6.54□□□□□ -1.36
SGIP1-214ENST00000497055 UNC80Q8N2C7 3258 aa6.54□□□□□ -1.36
SGIP1-214ENST00000497055 PIEZO1Q92508 2521 aa6.53□□□□□ -1.36
SGIP1-214ENST00000497055 ERBB4Q15303 1308 aa6.53□□□□□ -1.36
SGIP1-214ENST00000497055 ZNF541Q9H0D2 1346 aa6.53□□□□□ -1.36
SGIP1-214ENST00000497055 KIAA0100Q14667 2235 aaKnown RBP6.53□□□□□ -1.36
SGIP1-214ENST00000497055 SOX1O00570 391 aaPredicted RBP6.53□□□□□ -1.36
SGIP1-214ENST00000497055 C21orf2O43822 256 aa6.53□□□□□ -1.36
SGIP1-214ENST00000497055 DKK1O94907 266 aa6.53□□□□□ -1.36
SGIP1-214ENST00000497055 EN2P19622 333 aaPredicted RBP6.53□□□□□ -1.36
SGIP1-214ENST00000497055 SMTNP53814 917 aa6.53□□□□□ -1.36
SGIP1-214ENST00000497055 ITPK1Q13572 414 aa6.53□□□□□ -1.36
SGIP1-214ENST00000497055 CRTC2Q53ET0 693 aaPredicted RBP6.53□□□□□ -1.36
SGIP1-214ENST00000497055 PRICKLE2Q7Z3G6 844 aa6.53□□□□□ -1.36
SGIP1-214ENST00000497055 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.53□□□□□ -1.36
SGIP1-214ENST00000497055 ZNF594Q96JF6 807 aaPredicted RBP6.53□□□□□ -1.36
SGIP1-214ENST00000497055 HHIPL1Q96JK4 782 aa6.53□□□□□ -1.36
SGIP1-214ENST00000497055 ZSCAN10Q96SZ4 725 aaPredicted RBP6.53□□□□□ -1.36
SGIP1-214ENST00000497055 TAOK3Q9H2K8 898 aa6.53□□□□□ -1.36
SGIP1-214ENST00000497055 ZNF408Q9H9D4 720 aa6.53□□□□□ -1.36
SGIP1-214ENST00000497055 ZNF358Q9NW07 568 aa6.53□□□□□ -1.36
SGIP1-214ENST00000497055 STXBP5LQ9Y2K9 1186 aa6.53□□□□□ -1.36
SGIP1-214ENST00000497055 TRPM7Q96QT4 1865 aa6.52□□□□□ -1.37
SGIP1-214ENST00000497055 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.52□□□□□ -1.37
SGIP1-214ENST00000497055 GTF2E1P29083 439 aaPredicted RBP6.52□□□□□ -1.37
SGIP1-214ENST00000497055 ITGAEP38570 1179 aa6.52□□□□□ -1.37
SGIP1-214ENST00000497055 KIF23Q02241 960 aaPredicted RBP6.52□□□□□ -1.37
SGIP1-214ENST00000497055 TLR1Q15399 786 aa6.52□□□□□ -1.37
SGIP1-214ENST00000497055 PBXIP1Q96AQ6 731 aa6.52□□□□□ -1.37
SGIP1-214ENST00000497055 LTV1Q96GA3 475 aaPredicted RBP6.52□□□□□ -1.37
SGIP1-214ENST00000497055 RANBP2P49792 3224 aaKnown RBP6.52□□□□□ -1.37
SGIP1-214ENST00000497055 NFAT5O94916 1531 aa6.51□□□□□ -1.37
SGIP1-214ENST00000497055 TMEM265A0A087WTH1 108 aa6.51□□□□□ -1.37
SGIP1-214ENST00000497055 A6NJY4 79 aa6.51□□□□□ -1.37
SGIP1-214ENST00000497055 SPATA31C2B4DYI2 1134 aa6.51□□□□□ -1.37
SGIP1-214ENST00000497055 USP17L15C9J2P7 530 aa6.51□□□□□ -1.37
SGIP1-214ENST00000497055 USP17L10C9JJH3 530 aa6.51□□□□□ -1.37
SGIP1-214ENST00000497055 USP17L13C9JLJ4 530 aa6.51□□□□□ -1.37
SGIP1-214ENST00000497055 USP17L12C9JPN9 530 aa6.51□□□□□ -1.37
SGIP1-214ENST00000497055 USP17L11C9JVI0 530 aa6.51□□□□□ -1.37
SGIP1-214ENST00000497055 USP17L21D6R901 530 aa6.51□□□□□ -1.37
SGIP1-214ENST00000497055 USP17L18D6R9N7 530 aa6.51□□□□□ -1.37
SGIP1-214ENST00000497055 USP17L22D6RA61 530 aa6.51□□□□□ -1.37
SGIP1-214ENST00000497055 USP17L17D6RBQ6 530 aa6.51□□□□□ -1.37
SGIP1-214ENST00000497055 USP17L19D6RCP7 530 aa6.51□□□□□ -1.37
SGIP1-214ENST00000497055 USP17L20D6RJB6 530 aa6.51□□□□□ -1.37
SGIP1-214ENST00000497055 M0R2N6 131 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms