RNA–Protein interactions for RNA: ENST00000496855.1

SNX13-211, Transcript of sorting nexin 13, humanhuman

TSL 1 (best)

Gene SNX13, Length 1,499 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-211ENST00000496855 DUSP9Q99956 384 aaKnown RBP8.64□□□□□ -1.03
SNX13-211ENST00000496855 TRIM56Q9BRZ2 755 aaKnown RBP8.64□□□□□ -1.03
SNX13-211ENST00000496855 RUSC1Q9BVN2 902 aa8.64□□□□□ -1.03
SNX13-211ENST00000496855 RNF208Q9H0X6 261 aa8.64□□□□□ -1.03
SNX13-211ENST00000496855 C12orf49Q9H741 205 aa8.64□□□□□ -1.03
SNX13-211ENST00000496855 AKAP2Q9Y2D5 859 aa8.64□□□□□ -1.03
SNX13-211ENST00000496855 FURINP09958 794 aa8.64□□□□□ -1.03
SNX13-211ENST00000496855 ZNF157P51786 506 aaPredicted RBP8.64□□□□□ -1.03
SNX13-211ENST00000496855 TP53INP1Q96A56 240 aa8.64□□□□□ -1.03
SNX13-211ENST00000496855 MEGF11A6BM72 1044 aa8.63□□□□□ -1.03
SNX13-211ENST00000496855 DLGAP3O95886 979 aa8.63□□□□□ -1.03
SNX13-211ENST00000496855 MAOBP27338 520 aa8.63□□□□□ -1.03
SNX13-211ENST00000496855 UBL7Q96S82 380 aaPredicted RBP8.63□□□□□ -1.03
SNX13-211ENST00000496855 CEP41Q9BYV8 373 aa8.63□□□□□ -1.03
SNX13-211ENST00000496855 RNF19AQ9NV58 838 aa8.63□□□□□ -1.03
SNX13-211ENST00000496855 FAM8A1Q9UBU6 413 aa8.63□□□□□ -1.03
SNX13-211ENST00000496855 GPN3Q9UHW5 284 aaPredicted RBP8.63□□□□□ -1.03
SNX13-211ENST00000496855 TRIM26Q12899 539 aaPredicted RBP8.62□□□□□ -1.03
SNX13-211ENST00000496855 POU4F3Q15319 338 aa8.62□□□□□ -1.03
SNX13-211ENST00000496855 RSPO4Q2I0M5 234 aaPredicted RBP8.62□□□□□ -1.03
SNX13-211ENST00000496855 NKAPLQ5M9Q1 402 aa8.62□□□□□ -1.03
SNX13-211ENST00000496855 TMPRSS13Q9BYE2 586 aa8.62□□□□□ -1.03
SNX13-211ENST00000496855 TMEM39AQ9NV64 488 aa8.62□□□□□ -1.03
SNX13-211ENST00000496855 AP3B2Q13367 1082 aa8.61□□□□□ -1.03
SNX13-211ENST00000496855 ANKRD34AQ69YU3 496 aa8.61□□□□□ -1.03
SNX13-211ENST00000496855 CORO1BQ9BR76 489 aa8.61□□□□□ -1.03
SNX13-211ENST00000496855 PPM1HQ9ULR3 514 aa8.61□□□□□ -1.03
SNX13-211ENST00000496855 USP17L7P0C7H9 530 aa8.6□□□□□ -1.03
SNX13-211ENST00000496855 EIF4BP23588 611 aaKnown RBP8.6□□□□□ -1.03
SNX13-211ENST00000496855 PPP2R3AQ06190 1150 aa8.6□□□□□ -1.03
SNX13-211ENST00000496855 EXOSC6Q5RKV6 272 aaKnown RBP8.6□□□□□ -1.03
SNX13-211ENST00000496855 NUTM2GQ5VZR2 741 aa8.6□□□□□ -1.03
SNX13-211ENST00000496855 PARP2Q9UGN5 583 aa8.6□□□□□ -1.03
SNX13-211ENST00000496855 AK5Q9Y6K8 562 aa8.6□□□□□ -1.03
SNX13-211ENST00000496855 ECEL1O95672 775 aa8.59□□□□□ -1.03
SNX13-211ENST00000496855 CTSBP07858 339 aa8.59□□□□□ -1.03
SNX13-211ENST00000496855 H2AFB1P0C5Y9 115 aa8.59□□□□□ -1.03
SNX13-211ENST00000496855 H2AFB2P0C5Z0 115 aa8.59□□□□□ -1.03
SNX13-211ENST00000496855 HP1BP3Q5SSJ5 553 aaPredicted RBP8.59□□□□□ -1.03
SNX13-211ENST00000496855 FDX2Q6P4F2 183 aa8.59□□□□□ -1.03
SNX13-211ENST00000496855 FAM46AQ96IP4 442 aaKnown RBP8.59□□□□□ -1.03
SNX13-211ENST00000496855 SUGCTQ9HAC7 445 aa8.59□□□□□ -1.03
SNX13-211ENST00000496855 DAB2P98082 770 aa8.58□□□□□ -1.04
SNX13-211ENST00000496855 TAGLNQ01995 201 aaKnown RBP8.58□□□□□ -1.04
SNX13-211ENST00000496855 UVSSAQ2YD98 709 aa8.58□□□□□ -1.04
SNX13-211ENST00000496855 SMG8Q8ND04 991 aaKnown RBP8.58□□□□□ -1.04
SNX13-211ENST00000496855 ANKRD24Q8TF21 1146 aa8.58□□□□□ -1.04
SNX13-211ENST00000496855 CYP4F12Q9HCS2 524 aa8.58□□□□□ -1.04
SNX13-211ENST00000496855 K7ELQ4 463 aaPredicted RBP8.57□□□□□ -1.04
SNX13-211ENST00000496855 SART1O43290 800 aaKnown RBP8.57□□□□□ -1.04
SNX13-211ENST00000496855 MFAP1P55081 439 aaKnown RBP8.57□□□□□ -1.04
SNX13-211ENST00000496855 XPCQ01831 940 aaPredicted RBP8.57□□□□□ -1.04
SNX13-211ENST00000496855 TPTE2Q6XPS3 522 aa8.57□□□□□ -1.04
SNX13-211ENST00000496855 NECAB3Q96P71 396 aaPredicted RBP8.57□□□□□ -1.04
SNX13-211ENST00000496855 CEP44Q9C0F1 390 aa8.57□□□□□ -1.04
SNX13-211ENST00000496855 DYRK3O43781 588 aa8.57□□□□□ -1.04
SNX13-211ENST00000496855 PREPP48147 710 aa8.57□□□□□ -1.04
SNX13-211ENST00000496855 PSMD2Q13200 908 aa8.57□□□□□ -1.04
SNX13-211ENST00000496855 TMC4Q7Z404 712 aa8.57□□□□□ -1.04
SNX13-211ENST00000496855 ARMC10Q8N2F6 343 aa8.57□□□□□ -1.04
SNX13-211ENST00000496855 C12orf50Q8NA57 414 aaPredicted RBP8.57□□□□□ -1.04
SNX13-211ENST00000496855 ADAM23O75077 832 aa8.56□□□□□ -1.04
SNX13-211ENST00000496855 FBXO24O75426 580 aa8.56□□□□□ -1.04
SNX13-211ENST00000496855 TIAF1O95411 115 aa8.56□□□□□ -1.04
SNX13-211ENST00000496855 GSTP1P09211 210 aaKnown RBP8.56□□□□□ -1.04
SNX13-211ENST00000496855 PRR23CQ6ZRP0 262 aa8.56□□□□□ -1.04
SNX13-211ENST00000496855 SULF2Q8IWU5 870 aa8.56□□□□□ -1.04
SNX13-211ENST00000496855 UTP4Q969X6 686 aaKnown RBP8.56□□□□□ -1.04
SNX13-211ENST00000496855 BCL2L13Q9BXK5 485 aa8.56□□□□□ -1.04
SNX13-211ENST00000496855 SEMA6BQ9H3T3 888 aa8.56□□□□□ -1.04
SNX13-211ENST00000496855 ENC1O14682 589 aa8.55□□□□□ -1.04
SNX13-211ENST00000496855 NME2P22392 152 aa8.55□□□□□ -1.04
SNX13-211ENST00000496855 PDE3AQ14432 1141 aa8.55□□□□□ -1.04
SNX13-211ENST00000496855 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.55□□□□□ -1.04
SNX13-211ENST00000496855 STK35Q8TDR2 534 aa8.55□□□□□ -1.04
SNX13-211ENST00000496855 MYRFLQ96LU7 910 aa8.55□□□□□ -1.04
SNX13-211ENST00000496855 FAM161BQ96MY7 647 aa8.55□□□□□ -1.04
SNX13-211ENST00000496855 ZC3H12CQ9C0D7 883 aaKnown RBP8.55□□□□□ -1.04
SNX13-211ENST00000496855 DHX15O43143 795 aaKnown RBP8.54□□□□□ -1.04
SNX13-211ENST00000496855 ARNTP27540 789 aa8.54□□□□□ -1.04
SNX13-211ENST00000496855 PDZD3Q86UT5 571 aa8.54□□□□□ -1.04
SNX13-211ENST00000496855 CCDC86Q9H6F5 360 aaKnown RBP8.54□□□□□ -1.04
SNX13-211ENST00000496855 RAD18Q9NS91 495 aa8.54□□□□□ -1.04
SNX13-211ENST00000496855 TTF2Q9UNY4 1162 aaKnown RBP8.54□□□□□ -1.04
SNX13-211ENST00000496855 GAS2O43903 313 aaKnown RBP8.53□□□□□ -1.04
SNX13-211ENST00000496855 DRD2P14416 443 aa8.53□□□□□ -1.04
SNX13-211ENST00000496855 SOX4Q06945 474 aaPredicted RBP8.53□□□□□ -1.04
SNX13-211ENST00000496855 GIPC2Q8TF65 315 aa8.53□□□□□ -1.04
SNX13-211ENST00000496855 AOC2O75106 756 aa8.52□□□□□ -1.05
SNX13-211ENST00000496855 PAGE1O75459 146 aa8.52□□□□□ -1.05
SNX13-211ENST00000496855 ADH5P11766 374 aa8.52□□□□□ -1.05
SNX13-211ENST00000496855 FAM20CQ8IXL6 584 aa8.52□□□□□ -1.05
SNX13-211ENST00000496855 WDR18Q9BV38 432 aa8.52□□□□□ -1.05
SNX13-211ENST00000496855 EMILIN2Q9BXX0 1053 aa8.52□□□□□ -1.05
SNX13-211ENST00000496855 KRT82Q9NSB4 513 aa8.52□□□□□ -1.05
SNX13-211ENST00000496855 HIF3AQ9Y2N7 669 aa8.52□□□□□ -1.05
SNX13-211ENST00000496855 RAXQ9Y2V3 346 aa8.52□□□□□ -1.05
SNX13-211ENST00000496855 SAMM50Q9Y512 469 aa8.52□□□□□ -1.05
SNX13-211ENST00000496855 SORBS3O60504 671 aa8.51□□□□□ -1.05
SNX13-211ENST00000496855 CELA3AP09093 270 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms