RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 IL15P40933 162 aaPredicted RBP15.87■□□□□ 0.13
PTPRF-214ENST00000496043 TM4SF4P48230 202 aa15.87■□□□□ 0.13
PTPRF-214ENST00000496043 HNRNPUQ00839 825 aaKnown RBP eCLIP15.87■□□□□ 0.13
PTPRF-214ENST00000496043 MAP3K11Q16584 847 aa15.87■□□□□ 0.13
PTPRF-214ENST00000496043 SPDYE2Q495Y8 402 aa15.87■□□□□ 0.13
PTPRF-214ENST00000496043 NBPF12Q5TAG4 269 aaPredicted RBP15.87■□□□□ 0.13
PTPRF-214ENST00000496043 SUGT1Q9Y2Z0 365 aa15.87■□□□□ 0.13
PTPRF-214ENST00000496043 A0A1B0GUL6 1792 aa15.86■□□□□ 0.13
PTPRF-214ENST00000496043 GRIK5Q16478 980 aa15.86■□□□□ 0.13
PTPRF-214ENST00000496043 ATP2B3Q16720 1220 aa15.86■□□□□ 0.13
PTPRF-214ENST00000496043 ATF7IPQ6VMQ6 1270 aa15.86■□□□□ 0.13
PTPRF-214ENST00000496043 WDR66Q8TBY9 1149 aa15.86■□□□□ 0.13
PTPRF-214ENST00000496043 TEKT1Q969V4 418 aa15.86■□□□□ 0.13
PTPRF-214ENST00000496043 COPRSQ9NQ92 184 aa15.86■□□□□ 0.13
PTPRF-214ENST00000496043 GNL3LQ9NVN8 582 aaKnown RBP15.86■□□□□ 0.13
PTPRF-214ENST00000496043 AOX1Q06278 1338 aa15.86■□□□□ 0.13
PTPRF-214ENST00000496043 USP2O75604 605 aaPredicted RBP15.85■□□□□ 0.13
PTPRF-214ENST00000496043 IREB2P48200 963 aaKnown RBP15.85■□□□□ 0.13
PTPRF-214ENST00000496043 TNNI2P48788 182 aa15.85■□□□□ 0.13
PTPRF-214ENST00000496043 MKRN3Q13064 507 aaKnown RBP15.85■□□□□ 0.13
PTPRF-214ENST00000496043 FZD1Q9UP38 647 aa15.85■□□□□ 0.13
PTPRF-214ENST00000496043 PA2G4Q9UQ80 394 aaKnown RBP15.85■□□□□ 0.13
PTPRF-214ENST00000496043 TCP10L2B9ZVM9 353 aa15.84■□□□□ 0.13
PTPRF-214ENST00000496043 TRIM27P14373 513 aa15.84■□□□□ 0.13
PTPRF-214ENST00000496043 INHBEP58166 350 aa15.84■□□□□ 0.13
PTPRF-214ENST00000496043 SREBF2Q12772 1141 aa15.84■□□□□ 0.13
PTPRF-214ENST00000496043 DGKZQ13574 1117 aa15.84■□□□□ 0.13
PTPRF-214ENST00000496043 SPRYD7Q5W111 196 aa15.84■□□□□ 0.13
PTPRF-214ENST00000496043 MCOLN1Q9GZU1 580 aa15.84■□□□□ 0.13
PTPRF-214ENST00000496043 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.84■□□□□ 0.13
PTPRF-214ENST00000496043 MAST3O60307 1309 aa15.84■□□□□ 0.13
PTPRF-214ENST00000496043 SRGAP3O43295 1099 aa15.83■□□□□ 0.12
PTPRF-214ENST00000496043 GNAI2P04899 355 aa15.83■□□□□ 0.12
PTPRF-214ENST00000496043 ZKSCAN2Q63HK3 967 aa15.83■□□□□ 0.12
PTPRF-214ENST00000496043 HHIPL2Q6UWX4 724 aa15.83■□□□□ 0.12
PTPRF-214ENST00000496043 CLUAP1Q96AJ1 413 aa15.83■□□□□ 0.12
PTPRF-214ENST00000496043 ZDHHC15Q96MV8 337 aa15.83■□□□□ 0.12
PTPRF-214ENST00000496043 CCDC85CA6NKD9 419 aa15.82■□□□□ 0.12
PTPRF-214ENST00000496043 TBC1D8O95759 1140 aa15.82■□□□□ 0.12
PTPRF-214ENST00000496043 MTX1Q13505 466 aa15.82■□□□□ 0.12
PTPRF-214ENST00000496043 ANKRD13AQ8IZ07 590 aa15.82■□□□□ 0.12
PTPRF-214ENST00000496043 TMOD2Q9NZR1 351 aa15.82■□□□□ 0.12
PTPRF-214ENST00000496043 DENND2AQ9ULE3 1009 aa15.82■□□□□ 0.12
PTPRF-214ENST00000496043 AKAP2Q9Y2D5 859 aa15.82■□□□□ 0.12
PTPRF-214ENST00000496043 MANSC4A6NHS7 340 aaPredicted RBP15.81■□□□□ 0.12
PTPRF-214ENST00000496043 SEMA3EO15041 775 aa15.81■□□□□ 0.12
PTPRF-214ENST00000496043 ZBTB48P10074 688 aaPredicted RBP15.81■□□□□ 0.12
PTPRF-214ENST00000496043 TIMM10P62072 90 aa15.81■□□□□ 0.12
PTPRF-214ENST00000496043 APOBEC3HQ6NTF7 200 aaKnown RBP15.81■□□□□ 0.12
PTPRF-214ENST00000496043 CLMNQ96JQ2 1002 aa15.81■□□□□ 0.12
PTPRF-214ENST00000496043 TMEM39BQ9GZU3 492 aa15.81■□□□□ 0.12
PTPRF-214ENST00000496043 TNNQ9UQP3 1299 aa15.81■□□□□ 0.12
PTPRF-214ENST00000496043 CASP8AP2Q9UKL3 1982 aa15.8■□□□□ 0.12
PTPRF-214ENST00000496043 ALDH1A1P00352 501 aa15.8■□□□□ 0.12
PTPRF-214ENST00000496043 FKBP1CQ5VVH2 108 aa15.8■□□□□ 0.12
PTPRF-214ENST00000496043 WNK4Q96J92 1243 aa15.8■□□□□ 0.12
PTPRF-214ENST00000496043 TEPSINQ96N21 525 aa15.8■□□□□ 0.12
PTPRF-214ENST00000496043 ZBTB22O15209 634 aa15.79■□□□□ 0.12
PTPRF-214ENST00000496043 LDHBP07195 334 aaKnown RBP15.79■□□□□ 0.12
PTPRF-214ENST00000496043 PHKA1P46020 1223 aa15.79■□□□□ 0.12
PTPRF-214ENST00000496043 MAP3K9P80192 1104 aa15.79■□□□□ 0.12
PTPRF-214ENST00000496043 TFCP2Q12800 502 aa15.79■□□□□ 0.12
PTPRF-214ENST00000496043 G3BP1Q13283 466 aaKnown RBP eCLIP15.79■□□□□ 0.12
PTPRF-214ENST00000496043 CCDC102BQ68D86 513 aa15.79■□□□□ 0.12
PTPRF-214ENST00000496043 FAM83AQ86UY5 434 aa15.79■□□□□ 0.12
PTPRF-214ENST00000496043 TMEM57Q8N5G2 664 aa15.79■□□□□ 0.12
PTPRF-214ENST00000496043 HOOK2Q96ED9 719 aa15.79■□□□□ 0.12
PTPRF-214ENST00000496043 AKAP11Q9UKA4 1901 aa15.78■□□□□ 0.12
PTPRF-214ENST00000496043 ADORA1P30542 326 aa15.78■□□□□ 0.12
PTPRF-214ENST00000496043 CACNB3P54284 484 aa15.78■□□□□ 0.12
PTPRF-214ENST00000496043 SSC5DA1L4H1 1573 aa15.78■□□□□ 0.12
PTPRF-214ENST00000496043 SALL1Q9NSC2 1324 aa15.77■□□□□ 0.12
PTPRF-214ENST00000496043 A0A1B0GUL7 405 aa15.77■□□□□ 0.12
PTPRF-214ENST00000496043 GPR25O00155 361 aa15.77■□□□□ 0.12
PTPRF-214ENST00000496043 NOM1Q5C9Z4 860 aaKnown RBP15.77■□□□□ 0.12
PTPRF-214ENST00000496043 OTUD7BQ6GQQ9 843 aa15.77■□□□□ 0.12
PTPRF-214ENST00000496043 CTU1Q7Z7A3 348 aaKnown RBP15.77■□□□□ 0.12
PTPRF-214ENST00000496043 IFNL1Q8IU54 200 aa15.77■□□□□ 0.12
PTPRF-214ENST00000496043 ZGPATQ8N5A5 531 aaKnown RBP15.77■□□□□ 0.12
PTPRF-214ENST00000496043 ZNF296Q8WUU4 475 aaPredicted RBP15.77■□□□□ 0.12
PTPRF-214ENST00000496043 XAGE2Q96GT9 111 aa15.77■□□□□ 0.12
PTPRF-214ENST00000496043 NEUROD6Q96NK8 337 aa15.77■□□□□ 0.12
PTPRF-214ENST00000496043 CFHR5Q9BXR6 569 aa15.77■□□□□ 0.12
PTPRF-214ENST00000496043 PNMA6EA0A0J9YXQ4 647 aa15.76■□□□□ 0.11
PTPRF-214ENST00000496043 PRDX5P30044 214 aa15.76■□□□□ 0.11
PTPRF-214ENST00000496043 MVPQ14764 893 aaKnown RBP15.76■□□□□ 0.11
PTPRF-214ENST00000496043 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.76■□□□□ 0.11
PTPRF-214ENST00000496043 CDAN1Q8IWY9 1227 aa15.76■□□□□ 0.11
PTPRF-214ENST00000496043 FTSJ3Q8IY81 847 aaKnown RBP15.76■□□□□ 0.11
PTPRF-214ENST00000496043 ELP3Q9H9T3 547 aa15.76■□□□□ 0.11
PTPRF-214ENST00000496043 DAGLAQ9Y4D2 1042 aa15.76■□□□□ 0.11
PTPRF-214ENST00000496043 CSADQ9Y600 493 aa15.76■□□□□ 0.11
PTPRF-214ENST00000496043 ECM29Q5VYK3 1845 aa15.75■□□□□ 0.11
PTPRF-214ENST00000496043 FKTNO75072 461 aa15.75■□□□□ 0.11
PTPRF-214ENST00000496043 ATP8B2P98198 1209 aa15.75■□□□□ 0.11
PTPRF-214ENST00000496043 DIXDC1Q155Q3 683 aa15.75■□□□□ 0.11
PTPRF-214ENST00000496043 PKN2Q16513 984 aaKnown RBP15.75■□□□□ 0.11
PTPRF-214ENST00000496043 GORABQ5T7V8 394 aa15.75■□□□□ 0.11
PTPRF-214ENST00000496043 SPTY2D1Q68D10 685 aaPredicted RBP15.75■□□□□ 0.11
PTPRF-214ENST00000496043 CDC42EP5Q6NZY7 148 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms