RNA–Protein interactions for RNA: ENST00000495619.1

NCKAP1-208, Transcript of NCK associated protein 1, humanhuman

TSL 3

Gene NCKAP1, Length 665 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-208ENST00000495619 HGSNATQ68CP4 663 aa9.39□□□□□ -0.91
NCKAP1-208ENST00000495619 NXPE4Q6UWF7 544 aa9.39□□□□□ -0.91
NCKAP1-208ENST00000495619 PI16Q6UXB8 463 aa9.39□□□□□ -0.91
NCKAP1-208ENST00000495619 Q6ZS46 218 aa9.39□□□□□ -0.91
NCKAP1-208ENST00000495619 GLIS3Q8NEA6 775 aa9.39□□□□□ -0.91
NCKAP1-208ENST00000495619 AKAP2Q9Y2D5 859 aa9.39□□□□□ -0.91
NCKAP1-208ENST00000495619 PRPF40AO75400 957 aaKnown RBP9.38□□□□□ -0.91
NCKAP1-208ENST00000495619 POU4F3Q15319 338 aa9.38□□□□□ -0.91
NCKAP1-208ENST00000495619 EXOSC6Q5RKV6 272 aaKnown RBP9.38□□□□□ -0.91
NCKAP1-208ENST00000495619 MEGF10Q96KG7 1140 aa9.38□□□□□ -0.91
NCKAP1-208ENST00000495619 SSBP4Q9BWG4 385 aaPredicted RBP9.38□□□□□ -0.91
NCKAP1-208ENST00000495619 SEMA6BQ9H3T3 888 aa9.38□□□□□ -0.91
NCKAP1-208ENST00000495619 ITGAEP38570 1179 aa9.37□□□□□ -0.91
NCKAP1-208ENST00000495619 GPN3Q9UHW5 284 aaPredicted RBP9.37□□□□□ -0.91
NCKAP1-208ENST00000495619 LOC100289279A0A1B0GTE1 492 aa9.36□□□□□ -0.91
NCKAP1-208ENST00000495619 DHX15O43143 795 aaKnown RBP9.36□□□□□ -0.91
NCKAP1-208ENST00000495619 ADAM23O75077 832 aa9.36□□□□□ -0.91
NCKAP1-208ENST00000495619 RSPO4Q2I0M5 234 aaPredicted RBP9.36□□□□□ -0.91
NCKAP1-208ENST00000495619 NKAPLQ5M9Q1 402 aa9.36□□□□□ -0.91
NCKAP1-208ENST00000495619 UTP4Q969X6 686 aaKnown RBP9.36□□□□□ -0.91
NCKAP1-208ENST00000495619 CEP44Q9C0F1 390 aa9.36□□□□□ -0.91
NCKAP1-208ENST00000495619 BCL11AQ9H165 835 aa9.36□□□□□ -0.91
NCKAP1-208ENST00000495619 TMEM39AQ9NV64 488 aa9.36□□□□□ -0.91
NCKAP1-208ENST00000495619 WWC3Q9ULE0 1092 aa9.36□□□□□ -0.91
NCKAP1-208ENST00000495619 GAS2O43903 313 aaKnown RBP9.35□□□□□ -0.91
NCKAP1-208ENST00000495619 MAOBP27338 520 aa9.35□□□□□ -0.91
NCKAP1-208ENST00000495619 C12orf50Q8NA57 414 aaPredicted RBP9.35□□□□□ -0.91
NCKAP1-208ENST00000495619 RAD18Q9NS91 495 aa9.35□□□□□ -0.91
NCKAP1-208ENST00000495619 FAM8A1Q9UBU6 413 aa9.35□□□□□ -0.91
NCKAP1-208ENST00000495619 PPM1HQ9ULR3 514 aa9.35□□□□□ -0.91
NCKAP1-208ENST00000495619 SAMM50Q9Y512 469 aa9.35□□□□□ -0.91
NCKAP1-208ENST00000495619 DYRK3O43781 588 aa9.34□□□□□ -0.91
NCKAP1-208ENST00000495619 GNA15P30679 374 aa9.34□□□□□ -0.91
NCKAP1-208ENST00000495619 SMG8Q8ND04 991 aaKnown RBP9.34□□□□□ -0.91
NCKAP1-208ENST00000495619 TMPRSS13Q9BYE2 586 aa9.34□□□□□ -0.91
NCKAP1-208ENST00000495619 C12orf49Q9H741 205 aa9.34□□□□□ -0.91
NCKAP1-208ENST00000495619 SUGCTQ9HAC7 445 aa9.34□□□□□ -0.91
NCKAP1-208ENST00000495619 EIF4BP23588 611 aaKnown RBP9.33□□□□□ -0.92
NCKAP1-208ENST00000495619 DNAJC14Q6Y2X3 702 aaPredicted RBP9.33□□□□□ -0.92
NCKAP1-208ENST00000495619 PRR23CQ6ZRP0 262 aa9.33□□□□□ -0.92
NCKAP1-208ENST00000495619 UBL7Q96S82 380 aaPredicted RBP9.33□□□□□ -0.92
NCKAP1-208ENST00000495619 HIF3AQ9Y2N7 669 aa9.33□□□□□ -0.92
NCKAP1-208ENST00000495619 ZNF157P51786 506 aaPredicted RBP9.32□□□□□ -0.92
NCKAP1-208ENST00000495619 XPCQ01831 940 aaPredicted RBP9.32□□□□□ -0.92
NCKAP1-208ENST00000495619 PDE3AQ14432 1141 aa9.32□□□□□ -0.92
NCKAP1-208ENST00000495619 TMCO4Q5TGY1 634 aa9.32□□□□□ -0.92
NCKAP1-208ENST00000495619 SLC51AQ86UW1 340 aa9.32□□□□□ -0.92
NCKAP1-208ENST00000495619 FAM46AQ96IP4 442 aaKnown RBP9.32□□□□□ -0.92
NCKAP1-208ENST00000495619 SETDB2Q96T68 719 aa9.32□□□□□ -0.92
NCKAP1-208ENST00000495619 EMILIN2Q9BXX0 1053 aa9.32□□□□□ -0.92
NCKAP1-208ENST00000495619 STOML1Q9UBI4 398 aa9.32□□□□□ -0.92
NCKAP1-208ENST00000495619 USP11P51784 963 aa9.31□□□□□ -0.92
NCKAP1-208ENST00000495619 NPAS4Q8IUM7 802 aa9.31□□□□□ -0.92
NCKAP1-208ENST00000495619 DUSP9Q99956 384 aaKnown RBP9.31□□□□□ -0.92
NCKAP1-208ENST00000495619 YIPF2Q9BWQ6 316 aa9.31□□□□□ -0.92
NCKAP1-208ENST00000495619 OSBPL7Q9BZF2 842 aa9.31□□□□□ -0.92
NCKAP1-208ENST00000495619 RAXQ9Y2V3 346 aa9.31□□□□□ -0.92
NCKAP1-208ENST00000495619 GSC2O15499 205 aa9.3□□□□□ -0.92
NCKAP1-208ENST00000495619 FAAP100Q0VG06 881 aa9.3□□□□□ -0.92
NCKAP1-208ENST00000495619 MYRFLQ96LU7 910 aa9.3□□□□□ -0.92
NCKAP1-208ENST00000495619 TRIM56Q9BRZ2 755 aaKnown RBP9.3□□□□□ -0.92
NCKAP1-208ENST00000495619 NRSN2Q9GZP1 204 aa9.3□□□□□ -0.92
NCKAP1-208ENST00000495619 KCNF1Q9H3M0 494 aa9.3□□□□□ -0.92
NCKAP1-208ENST00000495619 USP17L7P0C7H9 530 aa9.29□□□□□ -0.92
NCKAP1-208ENST00000495619 SLFN14P0C7P3 912 aa9.29□□□□□ -0.92
NCKAP1-208ENST00000495619 PSMD2Q13200 908 aa9.29□□□□□ -0.92
NCKAP1-208ENST00000495619 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.29□□□□□ -0.92
NCKAP1-208ENST00000495619 C3orf58Q8NDZ4 430 aa9.29□□□□□ -0.92
NCKAP1-208ENST00000495619 AK5Q9Y6K8 562 aa9.29□□□□□ -0.92
NCKAP1-208ENST00000495619 GSTP1P09211 210 aaKnown RBP9.28□□□□□ -0.92
NCKAP1-208ENST00000495619 BMP3P12645 472 aa9.28□□□□□ -0.92
NCKAP1-208ENST00000495619 PREPP48147 710 aa9.28□□□□□ -0.92
NCKAP1-208ENST00000495619 SOX4Q06945 474 aaPredicted RBP9.28□□□□□ -0.92
NCKAP1-208ENST00000495619 TPTE2Q6XPS3 522 aa9.28□□□□□ -0.92
NCKAP1-208ENST00000495619 ANKRD24Q8TF21 1146 aa9.28□□□□□ -0.92
NCKAP1-208ENST00000495619 DLGAP3O95886 979 aa9.27□□□□□ -0.93
NCKAP1-208ENST00000495619 NME2P22392 152 aa9.27□□□□□ -0.93
NCKAP1-208ENST00000495619 ARNTP27540 789 aa9.27□□□□□ -0.93
NCKAP1-208ENST00000495619 RXRBP28702 533 aa9.27□□□□□ -0.93
NCKAP1-208ENST00000495619 AKAP4Q5JQC9 854 aa9.27□□□□□ -0.93
NCKAP1-208ENST00000495619 CLEC10AQ8IUN9 316 aa9.27□□□□□ -0.93
NCKAP1-208ENST00000495619 SULF2Q8IWU5 870 aa9.27□□□□□ -0.93
NCKAP1-208ENST00000495619 FAM20CQ8IXL6 584 aa9.27□□□□□ -0.93
NCKAP1-208ENST00000495619 ARMC10Q8N2F6 343 aa9.27□□□□□ -0.93
NCKAP1-208ENST00000495619 NECAB3Q96P71 396 aaPredicted RBP9.27□□□□□ -0.93
NCKAP1-208ENST00000495619 MRS2Q9HD23 443 aa9.27□□□□□ -0.93
NCKAP1-208ENST00000495619 KRT82Q9NSB4 513 aa9.27□□□□□ -0.93
NCKAP1-208ENST00000495619 TTF2Q9UNY4 1162 aaKnown RBP9.27□□□□□ -0.93
NCKAP1-208ENST00000495619 SYNGAP1Q96PV0 1343 aa9.27□□□□□ -0.93
NCKAP1-208ENST00000495619 TIAF1O95411 115 aa9.26□□□□□ -0.93
NCKAP1-208ENST00000495619 LRRC14Q15048 493 aa9.26□□□□□ -0.93
NCKAP1-208ENST00000495619 ZNF326Q5BKZ1 582 aaKnown RBP9.26□□□□□ -0.93
NCKAP1-208ENST00000495619 PRSS36Q5K4E3 855 aa9.26□□□□□ -0.93
NCKAP1-208ENST00000495619 KCNB2Q92953 911 aa9.26□□□□□ -0.93
NCKAP1-208ENST00000495619 CBX8Q9HC52 389 aa9.26□□□□□ -0.93
NCKAP1-208ENST00000495619 PARP2Q9UGN5 583 aa9.26□□□□□ -0.93
NCKAP1-208ENST00000495619 AOC2O75106 756 aa9.25□□□□□ -0.93
NCKAP1-208ENST00000495619 ADH5P11766 374 aa9.25□□□□□ -0.93
NCKAP1-208ENST00000495619 BEND4Q6ZU67 534 aa9.25□□□□□ -0.93
NCKAP1-208ENST00000495619 DRD2P14416 443 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms