RNA–Protein interactions for RNA: ENST00000495457.1

RPRD1B-206, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 4

Gene RPRD1B, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-206ENST00000495457 SPDYE2Q495Y8 402 aa17.74■□□□□ 0.43
RPRD1B-206ENST00000495457 NBPF12Q5TAG4 269 aaPredicted RBP17.74■□□□□ 0.43
RPRD1B-206ENST00000495457 ZKSCAN2Q63HK3 967 aa17.74■□□□□ 0.43
RPRD1B-206ENST00000495457 ARMC9Q7Z3E5 817 aa17.74■□□□□ 0.43
RPRD1B-206ENST00000495457 TMEM57Q8N5G2 664 aa17.74■□□□□ 0.43
RPRD1B-206ENST00000495457 RNF186Q9NXI6 227 aa17.74■□□□□ 0.43
RPRD1B-206ENST00000495457 PPP2R3BQ9Y5P8 575 aa17.74■□□□□ 0.43
RPRD1B-206ENST00000495457 MKRN3Q13064 507 aaKnown RBP17.73■□□□□ 0.43
RPRD1B-206ENST00000495457 MTX1Q13505 466 aa17.73■□□□□ 0.43
RPRD1B-206ENST00000495457 LDLRAD1Q5T700 205 aa17.73■□□□□ 0.43
RPRD1B-206ENST00000495457 ZBED9Q6R2W3 1325 aa17.72■□□□□ 0.43
RPRD1B-206ENST00000495457 ARAP2Q8WZ64 1704 aa17.72■□□□□ 0.43
RPRD1B-206ENST00000495457 TRPA1O75762 1119 aa17.72■□□□□ 0.43
RPRD1B-206ENST00000495457 GNAI2P04899 355 aa17.72■□□□□ 0.43
RPRD1B-206ENST00000495457 ADORA1P30542 326 aa17.72■□□□□ 0.43
RPRD1B-206ENST00000495457 CDAN1Q8IWY9 1227 aa17.72■□□□□ 0.43
RPRD1B-206ENST00000495457 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.72■□□□□ 0.43
RPRD1B-206ENST00000495457 TCP10L2B9ZVM9 353 aa17.71■□□□□ 0.43
RPRD1B-206ENST00000495457 PHKA1P46020 1223 aa17.71■□□□□ 0.43
RPRD1B-206ENST00000495457 HDLBPQ00341 1268 aaKnown RBP17.71■□□□□ 0.43
RPRD1B-206ENST00000495457 SUPT20HL1Q3ZLR7 823 aa17.71■□□□□ 0.43
RPRD1B-206ENST00000495457 TEKT1Q969V4 418 aa17.71■□□□□ 0.43
RPRD1B-206ENST00000495457 SAGE1Q9NXZ1 904 aa17.71■□□□□ 0.43
RPRD1B-206ENST00000495457 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.71■□□□□ 0.43
RPRD1B-206ENST00000495457 PNMA6EA0A0J9YXQ4 647 aa17.7■□□□□ 0.42
RPRD1B-206ENST00000495457 PPP1R12BO60237 982 aaPredicted RBP17.7■□□□□ 0.42
RPRD1B-206ENST00000495457 CACNB3P54284 484 aa17.7■□□□□ 0.42
RPRD1B-206ENST00000495457 TNFAIP1Q13829 316 aa17.7■□□□□ 0.42
RPRD1B-206ENST00000495457 MAP3K11Q16584 847 aa17.7■□□□□ 0.42
RPRD1B-206ENST00000495457 WDR66Q8TBY9 1149 aa17.7■□□□□ 0.42
RPRD1B-206ENST00000495457 CLMNQ96JQ2 1002 aa17.7■□□□□ 0.42
RPRD1B-206ENST00000495457 SUGT1Q9Y2Z0 365 aa17.7■□□□□ 0.42
RPRD1B-206ENST00000495457 ECM29Q5VYK3 1845 aa17.7■□□□□ 0.42
RPRD1B-206ENST00000495457 TIMM10P62072 90 aa17.69■□□□□ 0.42
RPRD1B-206ENST00000495457 TFCP2Q12800 502 aa17.69■□□□□ 0.42
RPRD1B-206ENST00000495457 APOBEC3HQ6NTF7 200 aaKnown RBP17.69■□□□□ 0.42
RPRD1B-206ENST00000495457 REM2Q8IYK8 340 aaPredicted RBP17.69■□□□□ 0.42
RPRD1B-206ENST00000495457 ZDHHC15Q96MV8 337 aa17.69■□□□□ 0.42
RPRD1B-206ENST00000495457 TEPSINQ96N21 525 aa17.69■□□□□ 0.42
RPRD1B-206ENST00000495457 TMEM39BQ9GZU3 492 aa17.69■□□□□ 0.42
RPRD1B-206ENST00000495457 USP2O75604 605 aaPredicted RBP17.68■□□□□ 0.42
RPRD1B-206ENST00000495457 RLBP1P12271 317 aa17.68■□□□□ 0.42
RPRD1B-206ENST00000495457 PRDX5P30044 214 aa17.68■□□□□ 0.42
RPRD1B-206ENST00000495457 SPRYD7Q5W111 196 aa17.68■□□□□ 0.42
RPRD1B-206ENST00000495457 CCDC102BQ68D86 513 aa17.68■□□□□ 0.42
RPRD1B-206ENST00000495457 ABHD8Q96I13 439 aa17.68■□□□□ 0.42
RPRD1B-206ENST00000495457 MRIQ9BWK5 157 aa17.68■□□□□ 0.42
RPRD1B-206ENST00000495457 GNL3LQ9NVN8 582 aaKnown RBP17.68■□□□□ 0.42
RPRD1B-206ENST00000495457 MAST3O60307 1309 aa17.68■□□□□ 0.42
RPRD1B-206ENST00000495457 A0A1B0GUL7 405 aa17.67■□□□□ 0.42
RPRD1B-206ENST00000495457 FTSJ3Q8IY81 847 aaKnown RBP17.67■□□□□ 0.42
RPRD1B-206ENST00000495457 SLC10A4Q96EP9 437 aa17.67■□□□□ 0.42
RPRD1B-206ENST00000495457 C1orf115Q9H7X2 142 aa17.67■□□□□ 0.42
RPRD1B-206ENST00000495457 TM4SF4P48230 202 aa17.66■□□□□ 0.42
RPRD1B-206ENST00000495457 TNNI2P48788 182 aa17.66■□□□□ 0.42
RPRD1B-206ENST00000495457 DIXDC1Q155Q3 683 aa17.66■□□□□ 0.42
RPRD1B-206ENST00000495457 HHIPL2Q6UWX4 724 aa17.66■□□□□ 0.42
RPRD1B-206ENST00000495457 XAGE2Q96GT9 111 aa17.66■□□□□ 0.42
RPRD1B-206ENST00000495457 DENND2AQ9ULE3 1009 aa17.66■□□□□ 0.42
RPRD1B-206ENST00000495457 SEMA3EO15041 775 aa17.65■□□□□ 0.42
RPRD1B-206ENST00000495457 TBC1D8O95759 1140 aa17.65■□□□□ 0.42
RPRD1B-206ENST00000495457 IREB2P48200 963 aaKnown RBP17.65■□□□□ 0.42
RPRD1B-206ENST00000495457 RASGRF1Q13972 1273 aa17.65■□□□□ 0.42
RPRD1B-206ENST00000495457 ITPRIPQ8IWB1 547 aa17.65■□□□□ 0.42
RPRD1B-206ENST00000495457 WNK4Q96J92 1243 aa17.65■□□□□ 0.42
RPRD1B-206ENST00000495457 MCOLN1Q9GZU1 580 aa17.65■□□□□ 0.42
RPRD1B-206ENST00000495457 AKAP2Q9Y2D5 859 aa17.65■□□□□ 0.42
RPRD1B-206ENST00000495457 DAGLAQ9Y4D2 1042 aa17.65■□□□□ 0.42
RPRD1B-206ENST00000495457 LDHBP07195 334 aaKnown RBP17.64■□□□□ 0.41
RPRD1B-206ENST00000495457 SREBF2Q12772 1141 aa17.64■□□□□ 0.41
RPRD1B-206ENST00000495457 ANKRD13AQ8IZ07 590 aa17.64■□□□□ 0.41
RPRD1B-206ENST00000495457 NEUROD6Q96NK8 337 aa17.64■□□□□ 0.41
RPRD1B-206ENST00000495457 TMOD2Q9NZR1 351 aa17.64■□□□□ 0.41
RPRD1B-206ENST00000495457 SALL1Q9NSC2 1324 aa17.64■□□□□ 0.41
RPRD1B-206ENST00000495457 CASP8AP2Q9UKL3 1982 aa17.64■□□□□ 0.41
RPRD1B-206ENST00000495457 ZBTB7BO15156 539 aaPredicted RBP17.63■□□□□ 0.41
RPRD1B-206ENST00000495457 GJA5P36382 358 aa17.63■□□□□ 0.41
RPRD1B-206ENST00000495457 G3BP1Q13283 466 aaKnown RBP eCLIP17.63■□□□□ 0.41
RPRD1B-206ENST00000495457 DGKZQ13574 1117 aa17.63■□□□□ 0.41
RPRD1B-206ENST00000495457 POLA2Q14181 598 aa17.63■□□□□ 0.41
RPRD1B-206ENST00000495457 UNCXA6NJT0 531 aa17.62■□□□□ 0.41
RPRD1B-206ENST00000495457 ZBTB22O15209 634 aa17.62■□□□□ 0.41
RPRD1B-206ENST00000495457 ZBTB48P10074 688 aaPredicted RBP17.62■□□□□ 0.41
RPRD1B-206ENST00000495457 MVPQ14764 893 aaKnown RBP17.62■□□□□ 0.41
RPRD1B-206ENST00000495457 FKBP1CQ5VVH2 108 aa17.62■□□□□ 0.41
RPRD1B-206ENST00000495457 CDC42EP5Q6NZY7 148 aa17.62■□□□□ 0.41
RPRD1B-206ENST00000495457 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.62■□□□□ 0.41
RPRD1B-206ENST00000495457 FAM83AQ86UY5 434 aa17.62■□□□□ 0.41
RPRD1B-206ENST00000495457 PANK1Q8TE04 598 aa17.62■□□□□ 0.41
RPRD1B-206ENST00000495457 ELP3Q9H9T3 547 aa17.62■□□□□ 0.41
RPRD1B-206ENST00000495457 MANSC4A6NHS7 340 aaPredicted RBP17.61■□□□□ 0.41
RPRD1B-206ENST00000495457 ATP8B2P98198 1209 aa17.61■□□□□ 0.41
RPRD1B-206ENST00000495457 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.61■□□□□ 0.41
RPRD1B-206ENST00000495457 SSH3Q8TE77 659 aa17.61■□□□□ 0.41
RPRD1B-206ENST00000495457 CNKSR2Q8WXI2 1034 aa17.61■□□□□ 0.41
RPRD1B-206ENST00000495457 R3HDMLQ9H3Y0 253 aa17.61■□□□□ 0.41
RPRD1B-206ENST00000495457 ABCF2Q9UG63 623 aa17.61■□□□□ 0.41
RPRD1B-206ENST00000495457 MAP3K9P80192 1104 aa17.6■□□□□ 0.41
RPRD1B-206ENST00000495457 TCP10Q12799 353 aa17.6■□□□□ 0.41
RPRD1B-206ENST00000495457 NFIAQ12857 509 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms