RNA–Protein interactions for RNA: ENST00000495298.1

GTF3C2-213, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 2

Gene GTF3C2, Length 1,064 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-213ENST00000495298 UNCXA6NJT0 531 aa12□□□□□ -0.49
GTF3C2-213ENST00000495298 TCP10L2B9ZVM9 353 aa12□□□□□ -0.49
GTF3C2-213ENST00000495298 CACNB3P54284 484 aa12□□□□□ -0.49
GTF3C2-213ENST00000495298 CCL15Q16663 113 aa12□□□□□ -0.49
GTF3C2-213ENST00000495298 MFSD14BQ5SR56 506 aa12□□□□□ -0.49
GTF3C2-213ENST00000495298 BEND3Q5T5X7 828 aa12□□□□□ -0.49
GTF3C2-213ENST00000495298 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12□□□□□ -0.491e-12■□□□□ 9.2
GTF3C2-213ENST00000495298 PUS3Q9BZE2 481 aaKnown RBP12□□□□□ -0.49
GTF3C2-213ENST00000495298 TTF2Q9UNY4 1162 aaKnown RBP12□□□□□ -0.49
GTF3C2-213ENST00000495298 FAM205AQ6ZU69 1335 aa12□□□□□ -0.49
GTF3C2-213ENST00000495298 VAMP4O75379 141 aa11.99□□□□□ -0.49
GTF3C2-213ENST00000495298 ECM2O94769 699 aaPredicted RBP11.99□□□□□ -0.49
GTF3C2-213ENST00000495298 TAF1CQ15572 869 aaPredicted RBP11.99□□□□□ -0.49
GTF3C2-213ENST00000495298 CCDC27Q2M243 656 aa11.99□□□□□ -0.49
GTF3C2-213ENST00000495298 OTUD7BQ6GQQ9 843 aa11.99□□□□□ -0.49
GTF3C2-213ENST00000495298 DZIP1LQ8IYY4 767 aaKnown RBP11.99□□□□□ -0.49
GTF3C2-213ENST00000495298 TDRD7Q8NHU6 1098 aaKnown RBP11.99□□□□□ -0.49
GTF3C2-213ENST00000495298 SH3TC2Q8TF17 1288 aa11.99□□□□□ -0.49
GTF3C2-213ENST00000495298 OTUD5Q96G74 571 aa11.99□□□□□ -0.49
GTF3C2-213ENST00000495298 CHMP4AQ9BY43 222 aa11.99□□□□□ -0.49
GTF3C2-213ENST00000495298 IQSEC3Q9UPP2 1182 aaPredicted RBP11.99□□□□□ -0.49
GTF3C2-213ENST00000495298 LAMA3Q16787 3333 aa11.99□□□□□ -0.49
GTF3C2-213ENST00000495298 CTGFP29279 349 aa11.98□□□□□ -0.49
GTF3C2-213ENST00000495298 CRKP46108 304 aa11.98□□□□□ -0.49
GTF3C2-213ENST00000495298 SLC9C1Q4G0N8 1177 aa11.98□□□□□ -0.49
GTF3C2-213ENST00000495298 LDHAL6AQ6ZMR3 332 aa11.98□□□□□ -0.49
GTF3C2-213ENST00000495298 KAZALD1Q96I82 304 aa11.98□□□□□ -0.49
GTF3C2-213ENST00000495298 FAM84BQ96KN1 310 aaPredicted RBP11.98□□□□□ -0.49
GTF3C2-213ENST00000495298 CNNM1Q9NRU3 951 aa11.98□□□□□ -0.49
GTF3C2-213ENST00000495298 SNCAIPQ9Y6H5 919 aa11.98□□□□□ -0.49
GTF3C2-213ENST00000495298 EXOSC9Q06265 439 aaKnown RBP11.97□□□□□ -0.49
GTF3C2-213ENST00000495298 TMEM106CQ9BVX2 250 aa11.97□□□□□ -0.49
GTF3C2-213ENST00000495298 ZFYVE28Q9HCC9 887 aa11.97□□□□□ -0.49
GTF3C2-213ENST00000495298 SPINK5Q9NQ38 1064 aaPredicted RBP11.97□□□□□ -0.49
GTF3C2-213ENST00000495298 SERPINA10Q9UK55 444 aa11.97□□□□□ -0.49
GTF3C2-213ENST00000495298 IL16Q14005 1332 aa11.96□□□□□ -0.49
GTF3C2-213ENST00000495298 H0YGN5 161 aa11.96□□□□□ -0.49
GTF3C2-213ENST00000495298 GRM8O00222 908 aa11.96□□□□□ -0.49
GTF3C2-213ENST00000495298 HIBADHP31937 336 aaKnown RBP11.96□□□□□ -0.49
GTF3C2-213ENST00000495298 MAP3K9P80192 1104 aa11.96□□□□□ -0.49
GTF3C2-213ENST00000495298 TNFAIP1Q13829 316 aa11.96□□□□□ -0.49
GTF3C2-213ENST00000495298 CCDC57Q2TAC2 916 aa11.96□□□□□ -0.49
GTF3C2-213ENST00000495298 TAF7LQ5H9L4 462 aa11.96□□□□□ -0.49
GTF3C2-213ENST00000495298 ZKSCAN4Q969J2 545 aaPredicted RBP11.96□□□□□ -0.49
GTF3C2-213ENST00000495298 SHISA4Q96DD7 197 aa11.96□□□□□ -0.49
GTF3C2-213ENST00000495298 SALL2Q9Y467 1007 aaPredicted RBP11.96□□□□□ -0.49
GTF3C2-213ENST00000495298 SPDYE5A6NIY4 337 aa11.95□□□□□ -0.5
GTF3C2-213ENST00000495298 BTBD19C9JJ37 291 aa11.95□□□□□ -0.5
GTF3C2-213ENST00000495298 IRF6O14896 467 aa11.95□□□□□ -0.5
GTF3C2-213ENST00000495298 GTF2A2P52657 109 aa11.95□□□□□ -0.5
GTF3C2-213ENST00000495298 LACTBP83111 547 aaPredicted RBP11.95□□□□□ -0.5
GTF3C2-213ENST00000495298 MTFR1Q15390 333 aa11.95□□□□□ -0.5
GTF3C2-213ENST00000495298 SLC4A8Q2Y0W8 1093 aa11.95□□□□□ -0.5
GTF3C2-213ENST00000495298 SUCLG2Q96I99 432 aa11.95□□□□□ -0.5
GTF3C2-213ENST00000495298 TLR2O60603 784 aa11.94□□□□□ -0.5
GTF3C2-213ENST00000495298 CHAF1AQ13111 956 aaPredicted RBP11.94□□□□□ -0.5
GTF3C2-213ENST00000495298 UBE4AQ14139 1066 aa11.94□□□□□ -0.5
GTF3C2-213ENST00000495298 LRRC24Q50LG9 513 aa11.94□□□□□ -0.5
GTF3C2-213ENST00000495298 WRNIP1Q96S55 665 aa11.94□□□□□ -0.5
GTF3C2-213ENST00000495298 RIPOR2Q9Y4F9 1068 aa11.94□□□□□ -0.5
GTF3C2-213ENST00000495298 CSADQ9Y600 493 aa11.94□□□□□ -0.5
GTF3C2-213ENST00000495298 NBPF7P0C2Y1 421 aaPredicted RBP11.93□□□□□ -0.5
GTF3C2-213ENST00000495298 CHRDL2Q6WN34 429 aa11.93□□□□□ -0.5
GTF3C2-213ENST00000495298 FBXO33Q7Z6M2 555 aa11.93□□□□□ -0.5
GTF3C2-213ENST00000495298 COL6A3P12111 3177 aa11.93□□□□□ -0.5
GTF3C2-213ENST00000495298 MYH13Q9UKX3 1938 aa11.92□□□□□ -0.5
GTF3C2-213ENST00000495298 INPP5BP32019 993 aa11.92□□□□□ -0.5
GTF3C2-213ENST00000495298 APOBEC3HQ6NTF7 200 aaKnown RBP11.92□□□□□ -0.5
GTF3C2-213ENST00000495298 SLC4A10Q6U841 1118 aa11.92□□□□□ -0.5
GTF3C2-213ENST00000495298 MIGA2Q7L4E1 593 aa11.92□□□□□ -0.5
GTF3C2-213ENST00000495298 NBPF11Q86T75 865 aa11.92□□□□□ -0.5
GTF3C2-213ENST00000495298 VGLL2Q8N8G2 317 aa11.92□□□□□ -0.5
GTF3C2-213ENST00000495298 KLHDC4Q8TBB5 520 aa11.92□□□□□ -0.5
GTF3C2-213ENST00000495298 TRIM47Q96LD4 638 aa11.92□□□□□ -0.5
GTF3C2-213ENST00000495298 CPA4Q9UI42 421 aa11.92□□□□□ -0.5
GTF3C2-213ENST00000495298 MGAMO43451 1857 aa11.91□□□□□ -0.5
GTF3C2-213ENST00000495298 ADGRA2Q96PE1 1338 aa11.91□□□□□ -0.5
GTF3C2-213ENST00000495298 CETPP11597 493 aa11.91□□□□□ -0.5
GTF3C2-213ENST00000495298 TNNI2P48788 182 aa11.91□□□□□ -0.5
GTF3C2-213ENST00000495298 BCAMP50895 628 aa11.91□□□□□ -0.5
GTF3C2-213ENST00000495298 MOGSQ13724 837 aa11.91□□□□□ -0.5
GTF3C2-213ENST00000495298 C17orf99Q6UX52 265 aa11.91□□□□□ -0.5
GTF3C2-213ENST00000495298 ERO1BQ86YB8 467 aa11.91□□□□□ -0.5
GTF3C2-213ENST00000495298 ANKRD44Q8N8A2 993 aa11.91□□□□□ -0.5
GTF3C2-213ENST00000495298 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.91□□□□□ -0.5
GTF3C2-213ENST00000495298 C9orf78Q9NZ63 289 aaPredicted RBP11.91□□□□□ -0.5
GTF3C2-213ENST00000495298 RBM27Q9P2N5 1060 aaKnown RBP11.91□□□□□ -0.5
GTF3C2-213ENST00000495298 AK9Q5TCS8 1911 aa11.9□□□□□ -0.5
GTF3C2-213ENST00000495298 OSBPP22059 807 aa11.9□□□□□ -0.5
GTF3C2-213ENST00000495298 PPIL2Q13356 520 aa11.9□□□□□ -0.5
GTF3C2-213ENST00000495298 SNAPC2Q13487 334 aa11.9□□□□□ -0.5
GTF3C2-213ENST00000495298 UBE2Q1Q7Z7E8 422 aa11.9□□□□□ -0.5
GTF3C2-213ENST00000495298 TEKT1Q969V4 418 aa11.9□□□□□ -0.5
GTF3C2-213ENST00000495298 ZDHHC15Q96MV8 337 aa11.9□□□□□ -0.5
GTF3C2-213ENST00000495298 BICC1Q9H694 974 aaKnown RBP11.9□□□□□ -0.5
GTF3C2-213ENST00000495298 MROH5Q6ZUA9 1318 aa11.89□□□□□ -0.51
GTF3C2-213ENST00000495298 ALDH1L1O75891 902 aa11.89□□□□□ -0.51
GTF3C2-213ENST00000495298 PSMC4P43686 418 aa11.89□□□□□ -0.51
GTF3C2-213ENST00000495298 HDLBPQ00341 1268 aaKnown RBP11.89□□□□□ -0.51
GTF3C2-213ENST00000495298 ARHGEF6Q15052 776 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms