RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 CCDC102AQ96A19 550 aa21.78■■□□□ 1.08
HDAC4-211ENST00000494800 BEGAINQ9BUH8 593 aa21.78■■□□□ 1.08
HDAC4-211ENST00000494800 DEFB129Q9H1M3 183 aa21.78■■□□□ 1.08
HDAC4-211ENST00000494800 SURF6O75683 361 aaKnown RBP21.77■■□□□ 1.08
HDAC4-211ENST00000494800 PHKA1P46020 1223 aa21.77■■□□□ 1.08
HDAC4-211ENST00000494800 ZGPATQ8N5A5 531 aaKnown RBP21.77■■□□□ 1.08
HDAC4-211ENST00000494800 XAGE2Q96GT9 111 aa21.77■■□□□ 1.08
HDAC4-211ENST00000494800 MRIQ9BWK5 157 aa21.77■■□□□ 1.08
HDAC4-211ENST00000494800 POLR2AP24928 1970 aaKnown RBP21.77■■□□□ 1.08
HDAC4-211ENST00000494800 ZBTB22O15209 634 aa21.76■■□□□ 1.07
HDAC4-211ENST00000494800 ADORA1P30542 326 aa21.76■■□□□ 1.07
HDAC4-211ENST00000494800 ZNF157P51786 506 aaPredicted RBP21.76■■□□□ 1.07
HDAC4-211ENST00000494800 NOGQ13253 232 aa21.76■■□□□ 1.07
HDAC4-211ENST00000494800 PRAMEF18Q5VWM3 479 aa21.76■■□□□ 1.07
HDAC4-211ENST00000494800 PCDHAC2Q9Y5I4 1007 aa21.76■■□□□ 1.07
HDAC4-211ENST00000494800 TNNI2P48788 182 aa21.75■■□□□ 1.07
HDAC4-211ENST00000494800 SUPT20HL1Q3ZLR7 823 aa21.75■■□□□ 1.07
HDAC4-211ENST00000494800 CEP85Q6P2H3 762 aa21.75■■□□□ 1.07
HDAC4-211ENST00000494800 TMOD2Q9NZR1 351 aa21.75■■□□□ 1.07
HDAC4-211ENST00000494800 COG6Q9Y2V7 657 aa21.75■■□□□ 1.07
HDAC4-211ENST00000494800 PAPPA2Q9BXP8 1791 aa21.74■■□□□ 1.07
HDAC4-211ENST00000494800 LDHBP07195 334 aaKnown RBP21.74■■□□□ 1.07
HDAC4-211ENST00000494800 PDE3AQ14432 1141 aa21.74■■□□□ 1.07
HDAC4-211ENST00000494800 GRIK5Q16478 980 aa21.74■■□□□ 1.07
HDAC4-211ENST00000494800 SPDYE2Q495Y8 402 aa21.74■■□□□ 1.07
HDAC4-211ENST00000494800 ARMC9Q7Z3E5 817 aa21.74■■□□□ 1.07
HDAC4-211ENST00000494800 TDRD3Q9H7E2 651 aaKnown RBP21.74■■□□□ 1.07
HDAC4-211ENST00000494800 GPR108Q9NPR9 543 aa21.74■■□□□ 1.07
HDAC4-211ENST00000494800 WBP1LQ9NX94 342 aa21.74■■□□□ 1.07
HDAC4-211ENST00000494800 ZNF70Q9UC06 446 aaPredicted RBP21.74■■□□□ 1.07
HDAC4-211ENST00000494800 SALL1Q9NSC2 1324 aa21.74■■□□□ 1.07
HDAC4-211ENST00000494800 PCNTO95613 3336 aa21.73■■□□□ 1.07
HDAC4-211ENST00000494800 AOC2O75106 756 aa21.73■■□□□ 1.07
HDAC4-211ENST00000494800 HHIPL2Q6UWX4 724 aa21.73■■□□□ 1.07
HDAC4-211ENST00000494800 ZDHHC15Q96MV8 337 aa21.73■■□□□ 1.07
HDAC4-211ENST00000494800 NOP58Q9Y2X3 529 aaKnown RBP21.73■■□□□ 1.07
HDAC4-211ENST00000494800 PDS5AQ29RF7 1337 aaKnown RBP21.73■■□□□ 1.07
HDAC4-211ENST00000494800 PPP1R12BO60237 982 aaPredicted RBP21.72■■□□□ 1.07
HDAC4-211ENST00000494800 HMMRO75330 724 aa21.72■■□□□ 1.07
HDAC4-211ENST00000494800 HSP90AB4PQ58FF6 505 aa21.72■■□□□ 1.07
HDAC4-211ENST00000494800 SPTY2D1Q68D10 685 aaPredicted RBP21.72■■□□□ 1.07
HDAC4-211ENST00000494800 THSD7BQ9C0I4 1608 aa21.72■■□□□ 1.07
HDAC4-211ENST00000494800 ECM29Q5VYK3 1845 aa21.71■■□□□ 1.07
HDAC4-211ENST00000494800 MYH13Q9UKX3 1938 aa21.71■■□□□ 1.07
HDAC4-211ENST00000494800 CTCFP49711 727 aaPredicted RBP21.71■■□□□ 1.07
HDAC4-211ENST00000494800 RASGRF1Q13972 1273 aa21.71■■□□□ 1.07
HDAC4-211ENST00000494800 RASA3Q14644 834 aa21.71■■□□□ 1.07
HDAC4-211ENST00000494800 ERC1Q8IUD2 1116 aa21.71■■□□□ 1.07
HDAC4-211ENST00000494800 RPAP2Q8IXW5 612 aaPredicted RBP21.71■■□□□ 1.07
HDAC4-211ENST00000494800 YTHDC1Q96MU7 727 aaKnown RBP21.71■■□□□ 1.07
HDAC4-211ENST00000494800 UQCRFS1P1P0C7P4 283 aa21.7■■□□□ 1.06
HDAC4-211ENST00000494800 TNNI3KQ59H18 835 aa21.7■■□□□ 1.06
HDAC4-211ENST00000494800 CCDC158Q5M9N0 1113 aa21.7■■□□□ 1.06
HDAC4-211ENST00000494800 SLF2Q8IX21 1173 aa21.7■■□□□ 1.06
HDAC4-211ENST00000494800 ABCF2Q9UG63 623 aa21.7■■□□□ 1.06
HDAC4-211ENST00000494800 FPGT-TNNI3KV9GXZ4 949 aa21.7■■□□□ 1.06
HDAC4-211ENST00000494800 TCP10L2B9ZVM9 353 aa21.69■■□□□ 1.06
HDAC4-211ENST00000494800 UBE2Q2LH0YL09 131 aa21.69■■□□□ 1.06
HDAC4-211ENST00000494800 FOXN1O15353 648 aa21.69■■□□□ 1.06
HDAC4-211ENST00000494800 CA12O43570 354 aa21.69■■□□□ 1.06
HDAC4-211ENST00000494800 SLC10A3P09131 477 aa21.69■■□□□ 1.06
HDAC4-211ENST00000494800 PRDX5P30044 214 aa21.69■■□□□ 1.06
HDAC4-211ENST00000494800 PRKG1Q13976 671 aa21.69■■□□□ 1.06
HDAC4-211ENST00000494800 DZIP1Q86YF9 867 aaKnown RBP21.69■■□□□ 1.06
HDAC4-211ENST00000494800 ZBTB40Q9NUA8 1239 aa21.69■■□□□ 1.06
HDAC4-211ENST00000494800 ANGEL1Q9UNK9 670 aaKnown RBP21.69■■□□□ 1.06
HDAC4-211ENST00000494800 AOX1Q06278 1338 aa21.69■■□□□ 1.06
HDAC4-211ENST00000494800 TTC39AQ5SRH9 613 aa21.68■■□□□ 1.06
HDAC4-211ENST00000494800 MOB2Q70IA6 237 aa21.68■■□□□ 1.06
HDAC4-211ENST00000494800 REM2Q8IYK8 340 aaPredicted RBP21.68■■□□□ 1.06
HDAC4-211ENST00000494800 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.68■■□□□ 1.06
HDAC4-211ENST00000494800 FAM155AB1AL88 458 aaPredicted RBP21.67■■□□□ 1.06
HDAC4-211ENST00000494800 ARID4AP29374 1257 aaPredicted RBP21.67■■□□□ 1.06
HDAC4-211ENST00000494800 FKBP1CQ5VVH2 108 aa21.67■■□□□ 1.06
HDAC4-211ENST00000494800 APOBEC3HQ6NTF7 200 aaKnown RBP21.67■■□□□ 1.06
HDAC4-211ENST00000494800 SPATA5Q8NB90 893 aa21.67■■□□□ 1.06
HDAC4-211ENST00000494800 HOOK2Q96ED9 719 aa21.67■■□□□ 1.06
HDAC4-211ENST00000494800 IREB2P48200 963 aaKnown RBP21.66■■□□□ 1.06
HDAC4-211ENST00000494800 DIXDC1Q155Q3 683 aa21.66■■□□□ 1.06
HDAC4-211ENST00000494800 NBPF12Q5TAG4 269 aaPredicted RBP21.66■■□□□ 1.06
HDAC4-211ENST00000494800 ERICH6Q7L0X2 663 aa21.66■■□□□ 1.06
HDAC4-211ENST00000494800 RASAL3Q86YV0 1011 aa21.66■■□□□ 1.06
HDAC4-211ENST00000494800 HMG20BQ9P0W2 317 aa21.66■■□□□ 1.06
HDAC4-211ENST00000494800 DAGLAQ9Y4D2 1042 aa21.66■■□□□ 1.06
HDAC4-211ENST00000494800 UNCXA6NJT0 531 aa21.65■■□□□ 1.06
HDAC4-211ENST00000494800 FAM83AQ86UY5 434 aa21.65■■□□□ 1.06
HDAC4-211ENST00000494800 EXOC6BQ9Y2D4 811 aa21.65■■□□□ 1.06
HDAC4-211ENST00000494800 GSTO1P78417 241 aa21.64■■□□□ 1.05
HDAC4-211ENST00000494800 KIF23Q02241 960 aaPredicted RBP21.64■■□□□ 1.05
HDAC4-211ENST00000494800 MAP3K11Q16584 847 aa21.64■■□□□ 1.05
HDAC4-211ENST00000494800 C20orf194Q5TEA3 1177 aa21.64■■□□□ 1.05
HDAC4-211ENST00000494800 DBNDD2Q9BQY9 259 aa21.64■■□□□ 1.05
HDAC4-211ENST00000494800 TMEM39BQ9GZU3 492 aa21.64■■□□□ 1.05
HDAC4-211ENST00000494800 PRDM10Q9NQV6 1147 aa21.64■■□□□ 1.05
HDAC4-211ENST00000494800 CACNB3P54284 484 aa21.63■■□□□ 1.05
HDAC4-211ENST00000494800 LDLRAD1Q5T700 205 aa21.63■■□□□ 1.05
HDAC4-211ENST00000494800 MCAMP43121 646 aa21.62■■□□□ 1.05
HDAC4-211ENST00000494800 SLC10A4Q96EP9 437 aa21.62■■□□□ 1.05
HDAC4-211ENST00000494800 ZNF512BQ96KM6 892 aaPredicted RBP21.62■■□□□ 1.05
HDAC4-211ENST00000494800 USP40Q9NVE5 1235 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms