RNA–Protein interactions for RNA: ENST00000494674.1

PRPF4B-209, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 1,727 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-209ENST00000494674 TMEM87AQ8NBN3 555 aa12.58□□□□□ -0.4
PRPF4B-209ENST00000494674 GPHNQ9NQX3 736 aaPredicted RBP12.58□□□□□ -0.4
PRPF4B-209ENST00000494674 ECM29Q5VYK3 1845 aa12.58□□□□□ -0.4
PRPF4B-209ENST00000494674 WDR19Q8NEZ3 1342 aa12.57□□□□□ -0.4
PRPF4B-209ENST00000494674 ZBTB22O15209 634 aa12.57□□□□□ -0.4
PRPF4B-209ENST00000494674 RBM6P78332 1123 aaKnown RBP12.57□□□□□ -0.4
PRPF4B-209ENST00000494674 CHST3Q7LGC8 479 aa12.57□□□□□ -0.4
PRPF4B-209ENST00000494674 ADGRA1Q86SQ6 560 aa12.57□□□□□ -0.4
PRPF4B-209ENST00000494674 SMARCC2Q8TAQ2 1214 aa12.57□□□□□ -0.4
PRPF4B-209ENST00000494674 AIDAQ96BJ3 306 aa12.57□□□□□ -0.4
PRPF4B-209ENST00000494674 ANKRD2Q9GZV1 360 aa12.57□□□□□ -0.4
PRPF4B-209ENST00000494674 ARMT1Q9H993 441 aa12.57□□□□□ -0.4
PRPF4B-209ENST00000494674 DENND2AQ9ULE3 1009 aa12.57□□□□□ -0.4
PRPF4B-209ENST00000494674 NSFL1CQ9UNZ2 370 aaKnown RBP12.57□□□□□ -0.4
PRPF4B-209ENST00000494674 PDS5AQ29RF7 1337 aaKnown RBP12.57□□□□□ -0.4
PRPF4B-209ENST00000494674 GSG1L2A8MUP6 293 aa12.57□□□□□ -0.4
PRPF4B-209ENST00000494674 ZNF213O14771 459 aa12.57□□□□□ -0.4
PRPF4B-209ENST00000494674 CTDNEP1O95476 244 aa12.57□□□□□ -0.4
PRPF4B-209ENST00000494674 DDR1Q08345 913 aa12.57□□□□□ -0.4
PRPF4B-209ENST00000494674 TXNRD1Q16881 649 aa12.57□□□□□ -0.4
PRPF4B-209ENST00000494674 CRY2Q49AN0 593 aa12.57□□□□□ -0.4
PRPF4B-209ENST00000494674 LCORLQ8N3X6 602 aa12.57□□□□□ -0.4
PRPF4B-209ENST00000494674 ZNF384Q8TF68 577 aa12.57□□□□□ -0.4
PRPF4B-209ENST00000494674 GNL3LQ9NVN8 582 aaKnown RBP12.57□□□□□ -0.4
PRPF4B-209ENST00000494674 LAMB1P07942 1786 aa12.56□□□□□ -0.4
PRPF4B-209ENST00000494674 SALL1Q9NSC2 1324 aa12.56□□□□□ -0.4
PRPF4B-209ENST00000494674 PATL2C9JE40 543 aaKnown RBP12.56□□□□□ -0.4
PRPF4B-209ENST00000494674 SEMA3EO15041 775 aa12.56□□□□□ -0.4
PRPF4B-209ENST00000494674 PDIA3P30101 505 aaKnown RBP12.56□□□□□ -0.4
PRPF4B-209ENST00000494674 GRAPQ13588 217 aa12.56□□□□□ -0.4
PRPF4B-209ENST00000494674 FOXD4L6Q3SYB3 417 aaPredicted RBP12.56□□□□□ -0.4
PRPF4B-209ENST00000494674 FOXD4L3Q6VB84 417 aaPredicted RBP12.56□□□□□ -0.4
PRPF4B-209ENST00000494674 CDC37L1Q7L3B6 337 aa12.56□□□□□ -0.4
PRPF4B-209ENST00000494674 NSUN7Q8NE18 718 aaKnown RBP12.56□□□□□ -0.4
PRPF4B-209ENST00000494674 GRAPLQ8TC17 118 aaPredicted RBP12.56□□□□□ -0.4
PRPF4B-209ENST00000494674 ZNF274Q96GC6 653 aaPredicted RBP12.56□□□□□ -0.4
PRPF4B-209ENST00000494674 LLPHQ9BRT6 129 aaKnown RBP12.56□□□□□ -0.4
PRPF4B-209ENST00000494674 TACC3Q9Y6A5 838 aa12.56□□□□□ -0.4
PRPF4B-209ENST00000494674 PRC1O43663 620 aa12.55□□□□□ -0.4
PRPF4B-209ENST00000494674 PRKAB2O43741 272 aa12.55□□□□□ -0.4
PRPF4B-209ENST00000494674 MCM5P33992 734 aa12.55□□□□□ -0.4
PRPF4B-209ENST00000494674 CAVIN4Q5BKX8 364 aa12.55□□□□□ -0.4
PRPF4B-209ENST00000494674 LARP1BQ659C4 914 aaKnown RBP12.55□□□□□ -0.4
PRPF4B-209ENST00000494674 TXNRD3Q86VQ6 643 aa12.55□□□□□ -0.4
PRPF4B-209ENST00000494674 GAS2L3Q86XJ1 694 aa12.55□□□□□ -0.4
PRPF4B-209ENST00000494674 IFNL3Q8IZI9 196 aa12.55□□□□□ -0.4
PRPF4B-209ENST00000494674 NCOA7Q8NI08 942 aa12.55□□□□□ -0.4
PRPF4B-209ENST00000494674 GDPD2Q9HCC8 539 aa12.55□□□□□ -0.4
PRPF4B-209ENST00000494674 LRP2BPQ9P2M1 347 aa12.55□□□□□ -0.4
PRPF4B-209ENST00000494674 CNPY2Q9Y2B0 182 aa12.55□□□□□ -0.4
PRPF4B-209ENST00000494674 COL11A2P13942 1736 aaPredicted RBP12.55□□□□□ -0.4
PRPF4B-209ENST00000494674 NEDD4P46934 1319 aa12.55□□□□□ -0.4
PRPF4B-209ENST00000494674 VPS37CA5D8V6 355 aaPredicted RBP12.54□□□□□ -0.4
PRPF4B-209ENST00000494674 SERPINB2P05120 415 aa12.54□□□□□ -0.4
PRPF4B-209ENST00000494674 PDIA4P13667 645 aaKnown RBP12.54□□□□□ -0.4
PRPF4B-209ENST00000494674 PDCP20941 246 aa12.54□□□□□ -0.4
PRPF4B-209ENST00000494674 FGD1P98174 961 aa12.54□□□□□ -0.4
PRPF4B-209ENST00000494674 ZNF827Q17R98 1081 aa12.54□□□□□ -0.4
PRPF4B-209ENST00000494674 ZNF772Q68DY9 489 aaPredicted RBP12.54□□□□□ -0.4
PRPF4B-209ENST00000494674 USP48Q86UV5 1035 aa12.54□□□□□ -0.4
PRPF4B-209ENST00000494674 BRPF3Q9ULD4 1205 aa12.54□□□□□ -0.4
PRPF4B-209ENST00000494674 GOLGA6L3A6NEY3 463 aa12.54□□□□□ -0.4
PRPF4B-209ENST00000494674 POLRMTO00411 1230 aaKnown RBP12.54□□□□□ -0.4
PRPF4B-209ENST00000494674 GADD45BO75293 160 aaPredicted RBP12.54□□□□□ -0.4
PRPF4B-209ENST00000494674 APPP05067 770 aa12.54□□□□□ -0.4
PRPF4B-209ENST00000494674 CAVIN1Q6NZI2 390 aaKnown RBP12.54□□□□□ -0.4
PRPF4B-209ENST00000494674 CYB5R4Q7L1T6 521 aa12.54□□□□□ -0.4
PRPF4B-209ENST00000494674 MIGA1Q8NAN2 632 aa12.54□□□□□ -0.4
PRPF4B-209ENST00000494674 RIOK1Q9BRS2 568 aaKnown RBP12.54□□□□□ -0.4
PRPF4B-209ENST00000494674 NCOA5Q9HCD5 579 aaKnown RBP12.54□□□□□ -0.4
PRPF4B-209ENST00000494674 TFCP2L1Q9NZI6 479 aa12.54□□□□□ -0.4
PRPF4B-209ENST00000494674 HPS5Q9UPZ3 1129 aa12.54□□□□□ -0.4
PRPF4B-209ENST00000494674 MYH2Q9UKX2 1941 aa12.53□□□□□ -0.4
PRPF4B-209ENST00000494674 CDK5RAP2Q96SN8 1893 aa12.53□□□□□ -0.4
PRPF4B-209ENST00000494674 DLEC1Q9Y238 1755 aa12.53□□□□□ -0.4
PRPF4B-209ENST00000494674 PLSCR1O15162 318 aa12.53□□□□□ -0.4
PRPF4B-209ENST00000494674 MBD3O95983 291 aa12.53□□□□□ -0.4
PRPF4B-209ENST00000494674 GNAT2P19087 354 aa12.53□□□□□ -0.4
PRPF4B-209ENST00000494674 CYP7A1P22680 504 aa12.53□□□□□ -0.4
PRPF4B-209ENST00000494674 HIBADHP31937 336 aaKnown RBP12.53□□□□□ -0.4
PRPF4B-209ENST00000494674 ZNF445P59923 1031 aa12.53□□□□□ -0.4
PRPF4B-209ENST00000494674 ZSCAN23Q3MJ62 389 aa12.53□□□□□ -0.4
PRPF4B-209ENST00000494674 RALYLQ86SE5 291 aaKnown RBP12.53□□□□□ -0.4
PRPF4B-209ENST00000494674 AKT1S1Q96B36 256 aa12.53□□□□□ -0.4
PRPF4B-209ENST00000494674 TMEM63CQ9P1W3 806 aa12.53□□□□□ -0.4
PRPF4B-209ENST00000494674 RBM27Q9P2N5 1060 aaKnown RBP12.53□□□□□ -0.4
PRPF4B-209ENST00000494674 ABCF2Q9UG63 623 aa12.53□□□□□ -0.4
PRPF4B-209ENST00000494674 ISY1Q9ULR0 285 aaKnown RBP12.53□□□□□ -0.4
PRPF4B-209ENST00000494674 PTPDC1A2A3K4 754 aa12.52□□□□□ -0.41
PRPF4B-209ENST00000494674 NPHP1O15259 732 aa12.52□□□□□ -0.41
PRPF4B-209ENST00000494674 XRCC6P12956 609 aaKnown RBP eCLIP12.52□□□□□ -0.41
PRPF4B-209ENST00000494674 CCT2P78371 535 aaKnown RBP12.52□□□□□ -0.41
PRPF4B-209ENST00000494674 DNM1Q05193 864 aaKnown RBP12.52□□□□□ -0.41
PRPF4B-209ENST00000494674 VPS37DQ86XT2 251 aa12.52□□□□□ -0.41
PRPF4B-209ENST00000494674 NAPBQ9H115 298 aa12.52□□□□□ -0.41
PRPF4B-209ENST00000494674 RAI14Q9P0K7 980 aa12.52□□□□□ -0.41
PRPF4B-209ENST00000494674 ATP6V1DQ9Y5K8 247 aa12.52□□□□□ -0.41
PRPF4B-209ENST00000494674 SLC4A4Q9Y6R1 1079 aa12.52□□□□□ -0.41
PRPF4B-209ENST00000494674 DUOX1Q9NRD9 1551 aa12.52□□□□□ -0.41
PRPF4B-209ENST00000494674 KLRG2A4D1S0 409 aaPredicted RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms