RNA–Protein interactions for RNA: ENST00000494426.1

CLIC3-203, Transcript of chloride intracellular channel 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC3, Length 1,017 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3-203ENST00000494426 UQCRFS1P1P0C7P4 283 aa28.8■■■□□ 2.2
CLIC3-203ENST00000494426 SPDYE6P0CI01 402 aa28.8■■■□□ 2.2
CLIC3-203ENST00000494426 CRKP46108 304 aa28.8■■■□□ 2.2
CLIC3-203ENST00000494426 PI16Q6UXB8 463 aa28.8■■■□□ 2.2
CLIC3-203ENST00000494426 AACSQ86V21 672 aa28.8■■■□□ 2.2
CLIC3-203ENST00000494426 PRDX5P30044 214 aa28.79■■■□□ 2.2
CLIC3-203ENST00000494426 MCAMP43121 646 aa28.79■■■□□ 2.2
CLIC3-203ENST00000494426 HDLBPQ00341 1268 aaKnown RBP28.79■■■□□ 2.2
CLIC3-203ENST00000494426 CST9Q5W186 159 aa28.79■■■□□ 2.2
CLIC3-203ENST00000494426 SPATA5Q8NB90 893 aa28.79■■■□□ 2.2
CLIC3-203ENST00000494426 EXOC6Q8TAG9 804 aa28.79■■■□□ 2.2
CLIC3-203ENST00000494426 MRIQ9BWK5 157 aa28.79■■■□□ 2.2
CLIC3-203ENST00000494426 RBM5P52756 815 aaKnown RBP eCLIP28.78■■■□□ 2.2
CLIC3-203ENST00000494426 CCDC158Q5M9N0 1113 aa28.78■■■□□ 2.2
CLIC3-203ENST00000494426 SULF1Q8IWU6 871 aa28.78■■■□□ 2.2
CLIC3-203ENST00000494426 ZNF512BQ96KM6 892 aaPredicted RBP28.78■■■□□ 2.2
CLIC3-203ENST00000494426 TMEM88BA6NKF7 163 aa28.77■■■□□ 2.2
CLIC3-203ENST00000494426 TTC39AQ5SRH9 613 aa28.77■■■□□ 2.2
CLIC3-203ENST00000494426 CLASRPQ8N2M8 674 aaKnown RBP28.77■■■□□ 2.2
CLIC3-203ENST00000494426 CREBZFQ9NS37 354 aa28.77■■■□□ 2.2
CLIC3-203ENST00000494426 MAST3O60307 1309 aa28.75■■■□□ 2.19
CLIC3-203ENST00000494426 LDHBP07195 334 aaKnown RBP28.75■■■□□ 2.19
CLIC3-203ENST00000494426 DNAJC5GQ8N7S2 189 aa28.75■■■□□ 2.19
CLIC3-203ENST00000494426 TEKT1Q969V4 418 aa28.75■■■□□ 2.19
CLIC3-203ENST00000494426 AAMPQ13685 434 aa28.74■■■□□ 2.19
CLIC3-203ENST00000494426 HHIPL2Q6UWX4 724 aa28.74■■■□□ 2.19
CLIC3-203ENST00000494426 TBC1D9Q6ZT07 1266 aa28.74■■■□□ 2.19
CLIC3-203ENST00000494426 ZGPATQ8N5A5 531 aaKnown RBP28.74■■■□□ 2.19
CLIC3-203ENST00000494426 ZDHHC15Q96MV8 337 aa28.74■■■□□ 2.19
CLIC3-203ENST00000494426 TDRD3Q9H7E2 651 aaKnown RBP28.74■■■□□ 2.19
CLIC3-203ENST00000494426 SNRKQ9NRH2 765 aa28.74■■■□□ 2.19
CLIC3-203ENST00000494426 ABCF2Q9UG63 623 aa28.74■■■□□ 2.19
CLIC3-203ENST00000494426 CLRN2A0PK11 232 aa28.73■■■□□ 2.19
CLIC3-203ENST00000494426 SMARCA5O60264 1052 aaPredicted RBP28.73■■■□□ 2.19
CLIC3-203ENST00000494426 CELF2O95319 508 aaKnown RBP28.73■■■□□ 2.19
CLIC3-203ENST00000494426 LRRCC1Q9C099 1032 aa28.73■■■□□ 2.19
CLIC3-203ENST00000494426 DIXDC1Q155Q3 683 aa28.72■■■□□ 2.19
CLIC3-203ENST00000494426 SPDYE2Q495Y8 402 aa28.72■■■□□ 2.19
CLIC3-203ENST00000494426 APOBEC3HQ6NTF7 200 aaKnown RBP28.72■■■□□ 2.19
CLIC3-203ENST00000494426 CDCA5Q96FF9 252 aa28.72■■■□□ 2.19
CLIC3-203ENST00000494426 ZNF70Q9UC06 446 aaPredicted RBP28.72■■■□□ 2.19
CLIC3-203ENST00000494426 MYO1BO43795 1136 aa28.71■■■□□ 2.19
CLIC3-203ENST00000494426 PRAMEF18Q5VWM3 479 aa28.71■■■□□ 2.19
CLIC3-203ENST00000494426 APOBEC3FQ8IUX4 373 aaKnown RBP28.71■■■□□ 2.19
CLIC3-203ENST00000494426 BCL11AQ9H165 835 aa28.71■■■□□ 2.19
CLIC3-203ENST00000494426 ZNF408Q9H9D4 720 aa28.71■■■□□ 2.19
CLIC3-203ENST00000494426 MYH2Q9UKX2 1941 aa28.71■■■□□ 2.19
CLIC3-203ENST00000494426 IFIT2P09913 472 aaKnown RBP28.7■■■□□ 2.18
CLIC3-203ENST00000494426 ZAP70P43403 619 aa28.7■■■□□ 2.18
CLIC3-203ENST00000494426 ZNF384Q8TF68 577 aa28.7■■■□□ 2.18
CLIC3-203ENST00000494426 DAGLAQ9Y4D2 1042 aa28.7■■■□□ 2.18
CLIC3-203ENST00000494426 MYO5AQ9Y4I1 1855 aaKnown RBP28.7■■■□□ 2.18
CLIC3-203ENST00000494426 CYP2E1P05181 493 aaPredicted RBP28.69■■■□□ 2.18
CLIC3-203ENST00000494426 IRX6P78412 446 aaPredicted RBP28.69■■■□□ 2.18
CLIC3-203ENST00000494426 HDAC1Q13547 482 aaPredicted RBP28.69■■■□□ 2.18
CLIC3-203ENST00000494426 SPTY2D1Q68D10 685 aaPredicted RBP28.69■■■□□ 2.18
CLIC3-203ENST00000494426 ERICH6Q7L0X2 663 aa28.69■■■□□ 2.18
CLIC3-203ENST00000494426 VEZTQ9HBM0 779 aa28.68■■■□□ 2.18
CLIC3-203ENST00000494426 MECOMQ03112 1051 aa28.67■■■□□ 2.18
CLIC3-203ENST00000494426 DEFB129Q9H1M3 183 aa28.67■■■□□ 2.18
CLIC3-203ENST00000494426 NDUFB9Q9Y6M9 179 aa28.67■■■□□ 2.18
CLIC3-203ENST00000494426 DZIP1Q86YF9 867 aaKnown RBP28.66■■■□□ 2.18
CLIC3-203ENST00000494426 NSUN4Q96CB9 384 aaKnown RBP28.66■■■□□ 2.18
CLIC3-203ENST00000494426 PIH1D3Q9NQM4 214 aaKnown RBP28.66■■■□□ 2.18
CLIC3-203ENST00000494426 TLL2Q9Y6L7 1015 aa28.66■■■□□ 2.18
CLIC3-203ENST00000494426 GAKO14976 1311 aa28.66■■■□□ 2.18
CLIC3-203ENST00000494426 FAM163AQ96GL9 167 aaPredicted RBP28.65■■■□□ 2.18
CLIC3-203ENST00000494426 ABT1Q9ULW3 272 aaKnown RBP28.65■■■□□ 2.18
CLIC3-203ENST00000494426 SAPCD2Q86UD0 394 aa28.64■■■□□ 2.18
CLIC3-203ENST00000494426 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.64■■■□□ 2.18
CLIC3-203ENST00000494426 KLRG1Q96E93 195 aa28.64■■■□□ 2.18
CLIC3-203ENST00000494426 LRP2BPQ9P2M1 347 aa28.64■■■□□ 2.18
CLIC3-203ENST00000494426 MKRN1Q9UHC7 482 aaKnown RBP28.64■■■□□ 2.18
CLIC3-203ENST00000494426 CEP350Q5VT06 3117 aa28.64■■■□□ 2.17
CLIC3-203ENST00000494426 RASSF10A6NK89 507 aa28.63■■■□□ 2.17
CLIC3-203ENST00000494426 CACNB3P54284 484 aa28.63■■■□□ 2.17
CLIC3-203ENST00000494426 RASA3Q14644 834 aa28.63■■■□□ 2.17
CLIC3-203ENST00000494426 CDC42EP5Q6NZY7 148 aa28.63■■■□□ 2.17
CLIC3-203ENST00000494426 ANTXR1Q9H6X2 564 aa28.63■■■□□ 2.17
CLIC3-203ENST00000494426 GBA2Q9HCG7 927 aaPredicted RBP28.63■■■□□ 2.17
CLIC3-203ENST00000494426 RAI14Q9P0K7 980 aa28.63■■■□□ 2.17
CLIC3-203ENST00000494426 CNTNAP1P78357 1384 aa28.62■■■□□ 2.17
CLIC3-203ENST00000494426 TCP10L2B9ZVM9 353 aa28.62■■■□□ 2.17
CLIC3-203ENST00000494426 PPP2R3BQ9Y5P8 575 aa28.62■■■□□ 2.17
CLIC3-203ENST00000494426 MAST2Q6P0Q8 1798 aa28.61■■■□□ 2.17
CLIC3-203ENST00000494426 IGHDP01880 384 aa28.61■■■□□ 2.17
CLIC3-203ENST00000494426 DEFB115Q30KQ5 88 aa28.61■■■□□ 2.17
CLIC3-203ENST00000494426 SLF2Q8IX21 1173 aa28.61■■■□□ 2.17
CLIC3-203ENST00000494426 DOCK2Q92608 1830 aa28.61■■■□□ 2.17
CLIC3-203ENST00000494426 MROH7-TTC4A0A0A0MT08 1334 aa28.61■■■□□ 2.17
CLIC3-203ENST00000494426 ATP5JP18859 108 aa28.6■■■□□ 2.17
CLIC3-203ENST00000494426 TNFAIP1Q13829 316 aa28.6■■■□□ 2.17
CLIC3-203ENST00000494426 C2orf69Q8N8R5 385 aa28.6■■■□□ 2.17
CLIC3-203ENST00000494426 GCC1Q96CN9 775 aa28.6■■■□□ 2.17
CLIC3-203ENST00000494426 SSC5DA1L4H1 1573 aa28.59■■■□□ 2.17
CLIC3-203ENST00000494426 GPR75-ASB3A0A0A6YYF3 556 aa28.59■■■□□ 2.17
CLIC3-203ENST00000494426 FKBP1CQ5VVH2 108 aa28.59■■■□□ 2.17
CLIC3-203ENST00000494426 TEPSINQ96N21 525 aa28.59■■■□□ 2.17
CLIC3-203ENST00000494426 USP40Q9NVE5 1235 aa28.59■■■□□ 2.17
CLIC3-203ENST00000494426 PAPPA2Q9BXP8 1791 aa28.58■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms