RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 TRIM27P14373 513 aa16.73■□□□□ 0.27
CTDSP1-212ENST00000494067 PUM3Q15397 648 aaKnown RBP16.73■□□□□ 0.27
CTDSP1-212ENST00000494067 SPDYE2Q495Y8 402 aa16.73■□□□□ 0.27
CTDSP1-212ENST00000494067 INTS3Q68E01 1043 aaKnown RBP16.73■□□□□ 0.27
CTDSP1-212ENST00000494067 SLC10A4Q96EP9 437 aa16.73■□□□□ 0.27
CTDSP1-212ENST00000494067 CLMNQ96JQ2 1002 aa16.73■□□□□ 0.27
CTDSP1-212ENST00000494067 ZNF70Q9UC06 446 aaPredicted RBP16.73■□□□□ 0.27
CTDSP1-212ENST00000494067 SERPINA10Q9UK55 444 aa16.73■□□□□ 0.27
CTDSP1-212ENST00000494067 CRKP46108 304 aa16.72■□□□□ 0.27
CTDSP1-212ENST00000494067 TNNI2P48788 182 aa16.72■□□□□ 0.27
CTDSP1-212ENST00000494067 RASA3Q14644 834 aa16.72■□□□□ 0.27
CTDSP1-212ENST00000494067 DZIP1LQ8IYY4 767 aaKnown RBP16.72■□□□□ 0.27
CTDSP1-212ENST00000494067 TEPSINQ96N21 525 aa16.72■□□□□ 0.27
CTDSP1-212ENST00000494067 KIF16BQ96L93 1317 aa16.71■□□□□ 0.27
CTDSP1-212ENST00000494067 UNCXA6NJT0 531 aa16.71■□□□□ 0.27
CTDSP1-212ENST00000494067 IREB2P48200 963 aaKnown RBP16.71■□□□□ 0.27
CTDSP1-212ENST00000494067 TM4SF4P48230 202 aa16.71■□□□□ 0.27
CTDSP1-212ENST00000494067 MAP3K11Q16584 847 aa16.71■□□□□ 0.27
CTDSP1-212ENST00000494067 DIEXFQ68CQ4 756 aaKnown RBP16.71■□□□□ 0.27
CTDSP1-212ENST00000494067 ARHGAP45Q92619 1136 aa16.71■□□□□ 0.27
CTDSP1-212ENST00000494067 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.71■□□□□ 0.27
CTDSP1-212ENST00000494067 SLC5A1P13866 664 aa16.7■□□□□ 0.26
CTDSP1-212ENST00000494067 GJA5P36382 358 aa16.7■□□□□ 0.26
CTDSP1-212ENST00000494067 CACNB3P54284 484 aa16.7■□□□□ 0.26
CTDSP1-212ENST00000494067 INHBEP58166 350 aa16.7■□□□□ 0.26
CTDSP1-212ENST00000494067 LPIN2Q92539 896 aa16.7■□□□□ 0.26
CTDSP1-212ENST00000494067 R3HDMLQ9H3Y0 253 aa16.7■□□□□ 0.26
CTDSP1-212ENST00000494067 MAST3O60307 1309 aa16.7■□□□□ 0.26
CTDSP1-212ENST00000494067 TCP10L2B9ZVM9 353 aa16.69■□□□□ 0.26
CTDSP1-212ENST00000494067 USP2O75604 605 aaPredicted RBP16.69■□□□□ 0.26
CTDSP1-212ENST00000494067 CIAO1O76071 339 aa16.69■□□□□ 0.26
CTDSP1-212ENST00000494067 ALDH1A1P00352 501 aa16.69■□□□□ 0.26
CTDSP1-212ENST00000494067 ADORA1P30542 326 aa16.69■□□□□ 0.26
CTDSP1-212ENST00000494067 HDLBPQ00341 1268 aaKnown RBP16.69■□□□□ 0.26
CTDSP1-212ENST00000494067 HNRNPUQ00839 825 aaKnown RBP eCLIP16.69■□□□□ 0.26
CTDSP1-212ENST00000494067 SPRYD7Q5W111 196 aa16.69■□□□□ 0.26
CTDSP1-212ENST00000494067 CLUAP1Q96AJ1 413 aa16.69■□□□□ 0.26
CTDSP1-212ENST00000494067 TMEM39BQ9GZU3 492 aa16.69■□□□□ 0.26
CTDSP1-212ENST00000494067 TMOD2Q9NZR1 351 aa16.69■□□□□ 0.26
CTDSP1-212ENST00000494067 FBXO3Q9UK99 471 aa16.69■□□□□ 0.26
CTDSP1-212ENST00000494067 MANSC4A6NHS7 340 aaPredicted RBP16.68■□□□□ 0.26
CTDSP1-212ENST00000494067 TBC1D8O95759 1140 aa16.68■□□□□ 0.26
CTDSP1-212ENST00000494067 PHKA1P46020 1223 aa16.68■□□□□ 0.26
CTDSP1-212ENST00000494067 APOBEC3HQ6NTF7 200 aaKnown RBP16.68■□□□□ 0.26
CTDSP1-212ENST00000494067 TEKT1Q969V4 418 aa16.68■□□□□ 0.26
CTDSP1-212ENST00000494067 COPRSQ9NQ92 184 aa16.68■□□□□ 0.26
CTDSP1-212ENST00000494067 SUGT1Q9Y2Z0 365 aa16.68■□□□□ 0.26
CTDSP1-212ENST00000494067 IPO8O15397 1037 aaKnown RBP16.67■□□□□ 0.26
CTDSP1-212ENST00000494067 ZBTB48P10074 688 aaPredicted RBP16.67■□□□□ 0.26
CTDSP1-212ENST00000494067 ATP2B3Q16720 1220 aa16.67■□□□□ 0.26
CTDSP1-212ENST00000494067 OTUD7BQ6GQQ9 843 aa16.67■□□□□ 0.26
CTDSP1-212ENST00000494067 ATF7IPQ6VMQ6 1270 aa16.67■□□□□ 0.26
CTDSP1-212ENST00000494067 CTU1Q7Z7A3 348 aaKnown RBP16.67■□□□□ 0.26
CTDSP1-212ENST00000494067 ANKRD13AQ8IZ07 590 aa16.67■□□□□ 0.26
CTDSP1-212ENST00000494067 FRAT1Q92837 279 aaPredicted RBP16.67■□□□□ 0.26
CTDSP1-212ENST00000494067 GNL3LQ9NVN8 582 aaKnown RBP16.67■□□□□ 0.26
CTDSP1-212ENST00000494067 CEP126Q9P2H0 1117 aa16.67■□□□□ 0.26
CTDSP1-212ENST00000494067 PRDX5P30044 214 aa16.66■□□□□ 0.26
CTDSP1-212ENST00000494067 MTX1Q13505 466 aa16.66■□□□□ 0.26
CTDSP1-212ENST00000494067 PKN2Q16513 984 aaKnown RBP16.66■□□□□ 0.26
CTDSP1-212ENST00000494067 WDR66Q8TBY9 1149 aa16.66■□□□□ 0.26
CTDSP1-212ENST00000494067 WNK4Q96J92 1243 aa16.66■□□□□ 0.26
CTDSP1-212ENST00000494067 ZDHHC15Q96MV8 337 aa16.66■□□□□ 0.26
CTDSP1-212ENST00000494067 MRIQ9BWK5 157 aa16.66■□□□□ 0.26
CTDSP1-212ENST00000494067 PNMA6EA0A0J9YXQ4 647 aa16.65■□□□□ 0.26
CTDSP1-212ENST00000494067 GNAI3P08754 354 aa16.65■□□□□ 0.26
CTDSP1-212ENST00000494067 IL15P40933 162 aaPredicted RBP16.65■□□□□ 0.26
CTDSP1-212ENST00000494067 DIXDC1Q155Q3 683 aa16.65■□□□□ 0.26
CTDSP1-212ENST00000494067 NOM1Q5C9Z4 860 aaKnown RBP16.65■□□□□ 0.26
CTDSP1-212ENST00000494067 TMEM57Q8N5G2 664 aa16.65■□□□□ 0.26
CTDSP1-212ENST00000494067 CNKSR2Q8WXI2 1034 aa16.65■□□□□ 0.26
CTDSP1-212ENST00000494067 HOOK2Q96ED9 719 aa16.65■□□□□ 0.26
CTDSP1-212ENST00000494067 GPR25O00155 361 aa16.64■□□□□ 0.25
CTDSP1-212ENST00000494067 IGF2BP3O00425 579 aaKnown RBP eCLIP16.64■□□□□ 0.25
CTDSP1-212ENST00000494067 SRGAP3O43295 1099 aa16.64■□□□□ 0.25
CTDSP1-212ENST00000494067 TIMM10P62072 90 aa16.64■□□□□ 0.25
CTDSP1-212ENST00000494067 MLLT1Q03111 559 aaPredicted RBP16.64■□□□□ 0.25
CTDSP1-212ENST00000494067 TFCP2Q12800 502 aa16.64■□□□□ 0.25
CTDSP1-212ENST00000494067 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.64■□□□□ 0.25
CTDSP1-212ENST00000494067 ZNF296Q8WUU4 475 aaPredicted RBP16.64■□□□□ 0.25
CTDSP1-212ENST00000494067 MYH2Q9UKX2 1941 aa16.64■□□□□ 0.25
CTDSP1-212ENST00000494067 RLBP1P12271 317 aa16.63■□□□□ 0.25
CTDSP1-212ENST00000494067 CCDC102BQ68D86 513 aa16.63■□□□□ 0.25
CTDSP1-212ENST00000494067 DAGLAQ9Y4D2 1042 aa16.63■□□□□ 0.25
CTDSP1-212ENST00000494067 FKTNO75072 461 aa16.62■□□□□ 0.25
CTDSP1-212ENST00000494067 HHIPL2Q6UWX4 724 aa16.62■□□□□ 0.25
CTDSP1-212ENST00000494067 IFNL1Q8IU54 200 aa16.62■□□□□ 0.25
CTDSP1-212ENST00000494067 PTPN18Q99952 460 aa16.62■□□□□ 0.25
CTDSP1-212ENST00000494067 CFHR5Q9BXR6 569 aa16.62■□□□□ 0.25
CTDSP1-212ENST00000494067 ELP3Q9H9T3 547 aa16.62■□□□□ 0.25
CTDSP1-212ENST00000494067 CSADQ9Y600 493 aa16.62■□□□□ 0.25
CTDSP1-212ENST00000494067 A0A1B0GUL7 405 aa16.61■□□□□ 0.25
CTDSP1-212ENST00000494067 RGS19P49795 217 aa16.61■□□□□ 0.25
CTDSP1-212ENST00000494067 NFIAQ12857 509 aa16.61■□□□□ 0.25
CTDSP1-212ENST00000494067 RASGRF1Q13972 1273 aa16.61■□□□□ 0.25
CTDSP1-212ENST00000494067 VGLL4Q14135 290 aa16.61■□□□□ 0.25
CTDSP1-212ENST00000494067 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.61■□□□□ 0.251e-6■□□□□ 9.3
CTDSP1-212ENST00000494067 DENND2AQ9ULE3 1009 aa16.61■□□□□ 0.25
CTDSP1-212ENST00000494067 SALL1Q9NSC2 1324 aa16.61■□□□□ 0.25
CTDSP1-212ENST00000494067 SEMA3EO15041 775 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms