RNA–Protein interactions for RNA: ENST00000494054.1

UFD1-210, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 588 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-210ENST00000494054 ATF7IPQ6VMQ6 1270 aa12.17□□□□□ -0.46
UFD1-210ENST00000494054 CDAN1Q8IWY9 1227 aa12.17□□□□□ -0.46
UFD1-210ENST00000494054 TBC1D22AQ8WUA7 517 aa12.17□□□□□ -0.46
UFD1-210ENST00000494054 FRAT1Q92837 279 aaPredicted RBP12.17□□□□□ -0.46
UFD1-210ENST00000494054 CLMNQ96JQ2 1002 aa12.17□□□□□ -0.46
UFD1-210ENST00000494054 COPRSQ9NQ92 184 aa12.17□□□□□ -0.46
UFD1-210ENST00000494054 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.17□□□□□ -0.46
UFD1-210ENST00000494054 CEP126Q9P2H0 1117 aa12.17□□□□□ -0.46
UFD1-210ENST00000494054 FBXO3Q9UK99 471 aa12.17□□□□□ -0.46
UFD1-210ENST00000494054 IPO8O15397 1037 aaKnown RBP12.16□□□□□ -0.46
UFD1-210ENST00000494054 USP2O75604 605 aaPredicted RBP12.16□□□□□ -0.46
UFD1-210ENST00000494054 IL15P40933 162 aaPredicted RBP12.16□□□□□ -0.46
UFD1-210ENST00000494054 HDLBPQ00341 1268 aaKnown RBP12.16□□□□□ -0.46
UFD1-210ENST00000494054 ATP2B3Q16720 1220 aa12.16□□□□□ -0.46
UFD1-210ENST00000494054 SUPT20HL1Q3ZLR7 823 aa12.16□□□□□ -0.46
UFD1-210ENST00000494054 REM2Q8IYK8 340 aaPredicted RBP12.16□□□□□ -0.46
UFD1-210ENST00000494054 CLUAP1Q96AJ1 413 aa12.16□□□□□ -0.46
UFD1-210ENST00000494054 TEPSINQ96N21 525 aa12.16□□□□□ -0.46
UFD1-210ENST00000494054 MCOLN1Q9GZU1 580 aa12.16□□□□□ -0.46
UFD1-210ENST00000494054 HDAC5Q9UQL6 1122 aa12.16□□□□□ -0.46
UFD1-210ENST00000494054 ARAP2Q8WZ64 1704 aa12.16□□□□□ -0.46
UFD1-210ENST00000494054 TCP10L2B9ZVM9 353 aa12.15□□□□□ -0.46
UFD1-210ENST00000494054 PPP1R12BO60237 982 aaPredicted RBP12.15□□□□□ -0.46
UFD1-210ENST00000494054 GNAI3P08754 354 aa12.15□□□□□ -0.46
UFD1-210ENST00000494054 ADORA1P30542 326 aa12.15□□□□□ -0.46
UFD1-210ENST00000494054 TM4SF4P48230 202 aa12.15□□□□□ -0.46
UFD1-210ENST00000494054 CACNB3P54284 484 aa12.15□□□□□ -0.46
UFD1-210ENST00000494054 MTX1Q13505 466 aa12.15□□□□□ -0.46
UFD1-210ENST00000494054 SPRYD7Q5W111 196 aa12.15□□□□□ -0.46
UFD1-210ENST00000494054 APOBEC3HQ6NTF7 200 aaKnown RBP12.15□□□□□ -0.46
UFD1-210ENST00000494054 SLC10A4Q96EP9 437 aa12.15□□□□□ -0.46
UFD1-210ENST00000494054 MRIQ9BWK5 157 aa12.15□□□□□ -0.46
UFD1-210ENST00000494054 TMEM39BQ9GZU3 492 aa12.15□□□□□ -0.46
UFD1-210ENST00000494054 AKAP11Q9UKA4 1901 aa12.14□□□□□ -0.47
UFD1-210ENST00000494054 SRGAP3O43295 1099 aa12.14□□□□□ -0.47
UFD1-210ENST00000494054 TBC1D8O95759 1140 aa12.14□□□□□ -0.47
UFD1-210ENST00000494054 PHKA1P46020 1223 aa12.14□□□□□ -0.47
UFD1-210ENST00000494054 DGKZQ13574 1117 aa12.14□□□□□ -0.47
UFD1-210ENST00000494054 TMEM57Q8N5G2 664 aa12.14□□□□□ -0.47
UFD1-210ENST00000494054 TEKT1Q969V4 418 aa12.14□□□□□ -0.47
UFD1-210ENST00000494054 ZDHHC15Q96MV8 337 aa12.14□□□□□ -0.47
UFD1-210ENST00000494054 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.14□□□□□ -0.47
UFD1-210ENST00000494054 TIMM10P62072 90 aa12.13□□□□□ -0.47
UFD1-210ENST00000494054 TFCP2Q12800 502 aa12.13□□□□□ -0.47
UFD1-210ENST00000494054 TNFAIP1Q13829 316 aa12.13□□□□□ -0.47
UFD1-210ENST00000494054 ZKSCAN2Q63HK3 967 aa12.13□□□□□ -0.47
UFD1-210ENST00000494054 HHIPL2Q6UWX4 724 aa12.13□□□□□ -0.47
UFD1-210ENST00000494054 WDR66Q8TBY9 1149 aa12.13□□□□□ -0.47
UFD1-210ENST00000494054 WNK4Q96J92 1243 aa12.13□□□□□ -0.47
UFD1-210ENST00000494054 R3HDMLQ9H3Y0 253 aa12.13□□□□□ -0.47
UFD1-210ENST00000494054 SUGT1Q9Y2Z0 365 aa12.13□□□□□ -0.47
UFD1-210ENST00000494054 PNMA6EA0A0J9YXQ4 647 aa12.12□□□□□ -0.47
UFD1-210ENST00000494054 UNCXA6NJT0 531 aa12.12□□□□□ -0.47
UFD1-210ENST00000494054 CCDC85CA6NKD9 419 aa12.12□□□□□ -0.47
UFD1-210ENST00000494054 GNAI2P04899 355 aa12.12□□□□□ -0.47
UFD1-210ENST00000494054 GJA5P36382 358 aa12.12□□□□□ -0.47
UFD1-210ENST00000494054 IREB2P48200 963 aaKnown RBP12.12□□□□□ -0.47
UFD1-210ENST00000494054 DIXDC1Q155Q3 683 aa12.12□□□□□ -0.47
UFD1-210ENST00000494054 CCDC102BQ68D86 513 aa12.12□□□□□ -0.47
UFD1-210ENST00000494054 MAST3O60307 1309 aa12.11□□□□□ -0.47
UFD1-210ENST00000494054 SLC34A2O95436 690 aa12.11□□□□□ -0.47
UFD1-210ENST00000494054 ZBTB48P10074 688 aaPredicted RBP12.11□□□□□ -0.47
UFD1-210ENST00000494054 PRDX5P30044 214 aa12.11□□□□□ -0.47
UFD1-210ENST00000494054 TNNI2P48788 182 aa12.11□□□□□ -0.47
UFD1-210ENST00000494054 SREBF2Q12772 1141 aa12.11□□□□□ -0.47
UFD1-210ENST00000494054 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.11□□□□□ -0.47
UFD1-210ENST00000494054 ANKRD13AQ8IZ07 590 aa12.11□□□□□ -0.47
UFD1-210ENST00000494054 GNL3LQ9NVN8 582 aaKnown RBP12.11□□□□□ -0.47
UFD1-210ENST00000494054 DAGLAQ9Y4D2 1042 aa12.11□□□□□ -0.47
UFD1-210ENST00000494054 A0A1B0GUL7 405 aa12.1□□□□□ -0.47
UFD1-210ENST00000494054 MANSC4A6NHS7 340 aaPredicted RBP12.1□□□□□ -0.47
UFD1-210ENST00000494054 IGF2BP3O00425 579 aaKnown RBP eCLIP12.1□□□□□ -0.47
UFD1-210ENST00000494054 FKBP1CQ5VVH2 108 aa12.1□□□□□ -0.47
UFD1-210ENST00000494054 ZNF296Q8WUU4 475 aaPredicted RBP12.1□□□□□ -0.47
UFD1-210ENST00000494054 CNKSR2Q8WXI2 1034 aa12.1□□□□□ -0.47
UFD1-210ENST00000494054 XAGE2Q96GT9 111 aa12.1□□□□□ -0.47
UFD1-210ENST00000494054 ELP3Q9H9T3 547 aa12.1□□□□□ -0.47
UFD1-210ENST00000494054 DENND2AQ9ULE3 1009 aa12.1□□□□□ -0.47
UFD1-210ENST00000494054 ZBED9Q6R2W3 1325 aa12.1□□□□□ -0.47
UFD1-210ENST00000494054 SALL1Q9NSC2 1324 aa12.1□□□□□ -0.47
UFD1-210ENST00000494054 GPR25O00155 361 aa12.09□□□□□ -0.47
UFD1-210ENST00000494054 SEMA3EO15041 775 aa12.09□□□□□ -0.47
UFD1-210ENST00000494054 ZBTB22O15209 634 aa12.09□□□□□ -0.47
UFD1-210ENST00000494054 LDHBP07195 334 aaKnown RBP12.09□□□□□ -0.47
UFD1-210ENST00000494054 RLBP1P12271 317 aa12.09□□□□□ -0.47
UFD1-210ENST00000494054 INHBEP58166 350 aa12.09□□□□□ -0.47
UFD1-210ENST00000494054 MAP3K9P80192 1104 aa12.09□□□□□ -0.47
UFD1-210ENST00000494054 RASGRF1Q13972 1273 aa12.09□□□□□ -0.47
UFD1-210ENST00000494054 CDC42EP5Q6NZY7 148 aa12.09□□□□□ -0.47
UFD1-210ENST00000494054 FAM83AQ86UY5 434 aa12.09□□□□□ -0.47
UFD1-210ENST00000494054 IFNL1Q8IU54 200 aa12.09□□□□□ -0.47
UFD1-210ENST00000494054 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.09□□□□□ -0.47
UFD1-210ENST00000494054 NEUROD6Q96NK8 337 aa12.09□□□□□ -0.47
UFD1-210ENST00000494054 CFHR5Q9BXR6 569 aa12.09□□□□□ -0.47
UFD1-210ENST00000494054 C1orf115Q9H7X2 142 aa12.09□□□□□ -0.47
UFD1-210ENST00000494054 TMOD2Q9NZR1 351 aa12.09□□□□□ -0.47
UFD1-210ENST00000494054 AKAP2Q9Y2D5 859 aa12.09□□□□□ -0.47
UFD1-210ENST00000494054 MYH13Q9UKX3 1938 aa12.09□□□□□ -0.47
UFD1-210ENST00000494054 NFIAQ12857 509 aa12.08□□□□□ -0.48
UFD1-210ENST00000494054 VGLL4Q14135 290 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms