RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 GALR2O43603 387 aaPredicted RBP13.02□□□□□ -0.33
PDLIM1-205ENST00000493949 MRE11P49959 708 aa13.02□□□□□ -0.33
PDLIM1-205ENST00000493949 KRT24Q2M2I5 525 aa13.02□□□□□ -0.33
PDLIM1-205ENST00000493949 SNX21Q969T3 373 aa13.02□□□□□ -0.33
PDLIM1-205ENST00000493949 LRCH3Q96II8 777 aa13.02□□□□□ -0.33
PDLIM1-205ENST00000493949 HTATIP2Q9BUP3 242 aa13.02□□□□□ -0.33
PDLIM1-205ENST00000493949 COL25A1Q9BXS0 654 aaPredicted RBP13.02□□□□□ -0.33
PDLIM1-205ENST00000493949 FZD1Q9UP38 647 aa13.02□□□□□ -0.33
PDLIM1-205ENST00000493949 COG6Q9Y2V7 657 aa13.02□□□□□ -0.33
PDLIM1-205ENST00000493949 NR2E3Q9Y5X4 410 aa13.02□□□□□ -0.33
PDLIM1-205ENST00000493949 XDHP47989 1333 aa13.02□□□□□ -0.33
PDLIM1-205ENST00000493949 ZBTB7BO15156 539 aaPredicted RBP13.01□□□□□ -0.33
PDLIM1-205ENST00000493949 PPP1R12BO60237 982 aaPredicted RBP13.01□□□□□ -0.33
PDLIM1-205ENST00000493949 SASH1O94885 1247 aa13.01□□□□□ -0.33
PDLIM1-205ENST00000493949 MCM4P33991 863 aa13.01□□□□□ -0.33
PDLIM1-205ENST00000493949 NFE2L2Q16236 605 aa13.01□□□□□ -0.33
PDLIM1-205ENST00000493949 SKOR2Q2VWA4 1001 aaPredicted RBP13.01□□□□□ -0.33
PDLIM1-205ENST00000493949 STRIP1Q5VSL9 837 aa13.01□□□□□ -0.33
PDLIM1-205ENST00000493949 SKAP1Q86WV1 359 aa13.01□□□□□ -0.33
PDLIM1-205ENST00000493949 TBC1D2Q9BYX2 928 aa13.01□□□□□ -0.33
PDLIM1-205ENST00000493949 DEFB129Q9H1M3 183 aa13.01□□□□□ -0.33
PDLIM1-205ENST00000493949 TSPYL4Q9UJ04 414 aa13.01□□□□□ -0.33
PDLIM1-205ENST00000493949 PPP2R3BQ9Y5P8 575 aa13.01□□□□□ -0.33
PDLIM1-205ENST00000493949 ALPK3Q96L96 1907 aa13□□□□□ -0.33
PDLIM1-205ENST00000493949 MED23Q9ULK4 1368 aa13□□□□□ -0.33
PDLIM1-205ENST00000493949 IRS4O14654 1257 aaPredicted RBP13□□□□□ -0.33
PDLIM1-205ENST00000493949 GNRH1P01148 92 aa13□□□□□ -0.33
PDLIM1-205ENST00000493949 ATP2B4P23634 1241 aa13□□□□□ -0.33
PDLIM1-205ENST00000493949 PRMT2P55345 433 aa13□□□□□ -0.33
PDLIM1-205ENST00000493949 TRIM28Q13263 835 aaKnown RBP13□□□□□ -0.33
PDLIM1-205ENST00000493949 ANKRD13DQ6ZTN6 518 aa13□□□□□ -0.33
PDLIM1-205ENST00000493949 NKX2-3Q8TAU0 364 aa13□□□□□ -0.33
PDLIM1-205ENST00000493949 SH3TC2Q8TF17 1288 aa13□□□□□ -0.33
PDLIM1-205ENST00000493949 RTN4Q9NQC3 1192 aaKnown RBP13□□□□□ -0.33
PDLIM1-205ENST00000493949 SEC31BQ9NQW1 1179 aa13□□□□□ -0.33
PDLIM1-205ENST00000493949 STXBP5LQ9Y2K9 1186 aa13□□□□□ -0.33
PDLIM1-205ENST00000493949 SPTBN5Q9NRC6 3674 aaKnown RBP12.99□□□□□ -0.33
PDLIM1-205ENST00000493949 VCANP13611 3396 aa12.99□□□□□ -0.33
PDLIM1-205ENST00000493949 CLCN1P35523 988 aa12.99□□□□□ -0.33
PDLIM1-205ENST00000493949 RBM25P49756 843 aaKnown RBP12.99□□□□□ -0.33
PDLIM1-205ENST00000493949 GLIPR1L2Q4G1C9 344 aa12.99□□□□□ -0.33
PDLIM1-205ENST00000493949 HSCBQ8IWL3 235 aa12.99□□□□□ -0.33
PDLIM1-205ENST00000493949 SMC5Q8IY18 1101 aa12.99□□□□□ -0.33
PDLIM1-205ENST00000493949 DZIP1LQ8IYY4 767 aaKnown RBP12.99□□□□□ -0.33
PDLIM1-205ENST00000493949 PLBD2Q8NHP8 589 aa12.99□□□□□ -0.33
PDLIM1-205ENST00000493949 PANK1Q8TE04 598 aa12.99□□□□□ -0.33
PDLIM1-205ENST00000493949 MS4A4AQ96JQ5 239 aa12.99□□□□□ -0.33
PDLIM1-205ENST00000493949 MXD3Q9BW11 206 aa12.99□□□□□ -0.33
PDLIM1-205ENST00000493949 BABAM1Q9NWV8 329 aa12.99□□□□□ -0.33
PDLIM1-205ENST00000493949 MYH3P11055 1940 aa12.98□□□□□ -0.33
PDLIM1-205ENST00000493949 ATP5J2-PTCD1G3V325 749 aa12.98□□□□□ -0.33
PDLIM1-205ENST00000493949 IPO8O15397 1037 aaKnown RBP12.98□□□□□ -0.33
PDLIM1-205ENST00000493949 MYCP01106 439 aaPredicted RBP12.98□□□□□ -0.33
PDLIM1-205ENST00000493949 GJA8P48165 433 aa12.98□□□□□ -0.33
PDLIM1-205ENST00000493949 ALDH1L2Q3SY69 923 aa12.98□□□□□ -0.33
PDLIM1-205ENST00000493949 FTSJ3Q8IY81 847 aaKnown RBP12.98□□□□□ -0.33
PDLIM1-205ENST00000493949 ANKRD13AQ8IZ07 590 aa12.98□□□□□ -0.33
PDLIM1-205ENST00000493949 MTMR14Q8NCE2 650 aa12.98□□□□□ -0.33
PDLIM1-205ENST00000493949 C22orf23Q9BZE7 217 aa12.98□□□□□ -0.33
PDLIM1-205ENST00000493949 ZFYVE28Q9HCC9 887 aa12.98□□□□□ -0.33
PDLIM1-205ENST00000493949 ZNF804BA4D1E1 1349 aa12.97□□□□□ -0.33
PDLIM1-205ENST00000493949 USP2O75604 605 aaPredicted RBP12.97□□□□□ -0.33
PDLIM1-205ENST00000493949 GJB1P08034 283 aa12.97□□□□□ -0.33
PDLIM1-205ENST00000493949 HSP90B1P14625 803 aaKnown RBP12.97□□□□□ -0.33
PDLIM1-205ENST00000493949 IREB2P48200 963 aaKnown RBP12.97□□□□□ -0.33
PDLIM1-205ENST00000493949 MTFR1Q15390 333 aa12.97□□□□□ -0.33
PDLIM1-205ENST00000493949 TAF1CQ15572 869 aaPredicted RBP12.97□□□□□ -0.33
PDLIM1-205ENST00000493949 SUPT20HL1Q3ZLR7 823 aa12.97□□□□□ -0.33
PDLIM1-205ENST00000493949 GBP4Q96PP9 640 aa12.97□□□□□ -0.33
PDLIM1-205ENST00000493949 PCDHB15Q9Y5E8 787 aa12.97□□□□□ -0.33
PDLIM1-205ENST00000493949 BRI3BPQ8WY22 251 aa12.96□□□□□ -0.33
PDLIM1-205ENST00000493949 COA1Q9GZY4 146 aa12.96□□□□□ -0.33
PDLIM1-205ENST00000493949 LAMA2P24043 3122 aaKnown RBP12.95□□□□□ -0.34
PDLIM1-205ENST00000493949 SEC24BO95487 1268 aa12.95□□□□□ -0.34
PDLIM1-205ENST00000493949 BMP8BP34820 402 aa12.95□□□□□ -0.34
PDLIM1-205ENST00000493949 LACTBP83111 547 aaPredicted RBP12.95□□□□□ -0.34
PDLIM1-205ENST00000493949 CCDC152Q4G0S7 254 aa12.95□□□□□ -0.34
PDLIM1-205ENST00000493949 DEFB123Q8N688 67 aa12.95□□□□□ -0.34
PDLIM1-205ENST00000493949 ZBTB38Q8NAP3 1195 aaPredicted RBP12.95□□□□□ -0.34
PDLIM1-205ENST00000493949 JARID2Q92833 1246 aaPredicted RBP12.95□□□□□ -0.34
PDLIM1-205ENST00000493949 OPTNQ96CV9 577 aa12.95□□□□□ -0.34
PDLIM1-205ENST00000493949 ZCCHC17Q9NP64 241 aaKnown RBP12.95□□□□□ -0.34
PDLIM1-205ENST00000493949 CHPF2Q9P2E5 772 aa12.95□□□□□ -0.34
PDLIM1-205ENST00000493949 TTC28Q96AY4 2481 aa12.94□□□□□ -0.34
PDLIM1-205ENST00000493949 MGAMO43451 1857 aa12.94□□□□□ -0.34
PDLIM1-205ENST00000493949 TLR2O60603 784 aa12.94□□□□□ -0.34
PDLIM1-205ENST00000493949 CAPN2P17655 700 aa12.94□□□□□ -0.34
PDLIM1-205ENST00000493949 CALD1Q05682 793 aaKnown RBP12.94□□□□□ -0.34
PDLIM1-205ENST00000493949 KIF22Q14807 665 aa12.94□□□□□ -0.34
PDLIM1-205ENST00000493949 TTLL5Q6EMB2 1281 aa12.94□□□□□ -0.34
PDLIM1-205ENST00000493949 KIAA0825Q8IV33 1275 aa12.94□□□□□ -0.34
PDLIM1-205ENST00000493949 CCDC85AQ96PX6 553 aaPredicted RBP12.94□□□□□ -0.34
PDLIM1-205ENST00000493949 ARHGAP39Q9C0H5 1083 aa12.94□□□□□ -0.34
PDLIM1-205ENST00000493949 SLKQ9H2G2 1235 aaPredicted RBP12.94□□□□□ -0.34
PDLIM1-205ENST00000493949 MTMR10Q9NXD2 777 aa12.94□□□□□ -0.34
PDLIM1-205ENST00000493949 DDIT3P35638 169 aa12.93□□□□□ -0.34
PDLIM1-205ENST00000493949 GTF2A2P52657 109 aa12.93□□□□□ -0.34
PDLIM1-205ENST00000493949 RIPK4P57078 832 aa12.93□□□□□ -0.34
PDLIM1-205ENST00000493949 DLGAP5Q15398 846 aa12.93□□□□□ -0.34
PDLIM1-205ENST00000493949 LRIT3Q3SXY7 679 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms