RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 PDS5AQ29RF7 1337 aaKnown RBP27.96■■■□□ 2.07
SNIP1-203ENST00000493916 SALL1Q9NSC2 1324 aa27.96■■■□□ 2.07
SNIP1-203ENST00000493916 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.96■■■□□ 2.07
SNIP1-203ENST00000493916 COG6Q9Y2V7 657 aa27.96■■■□□ 2.07
SNIP1-203ENST00000493916 NOP58Q9Y2X3 529 aaKnown RBP27.96■■■□□ 2.07
SNIP1-203ENST00000493916 CLRN2A0PK11 232 aa27.95■■■□□ 2.06
SNIP1-203ENST00000493916 PDE3AQ14432 1141 aa27.95■■■□□ 2.06
SNIP1-203ENST00000493916 SPDYE2Q495Y8 402 aa27.95■■■□□ 2.06
SNIP1-203ENST00000493916 PRAMEF18Q5VWM3 479 aa27.95■■■□□ 2.06
SNIP1-203ENST00000493916 TEKT1Q969V4 418 aa27.95■■■□□ 2.06
SNIP1-203ENST00000493916 DEFB129Q9H1M3 183 aa27.95■■■□□ 2.06
SNIP1-203ENST00000493916 SURF6O75683 361 aaKnown RBP27.94■■■□□ 2.06
SNIP1-203ENST00000493916 NF2P35240 595 aa27.94■■■□□ 2.06
SNIP1-203ENST00000493916 RGMBQ6NW40 437 aa27.94■■■□□ 2.06
SNIP1-203ENST00000493916 CHMP4BQ9H444 224 aaKnown RBP27.94■■■□□ 2.06
SNIP1-203ENST00000493916 GPR108Q9NPR9 543 aa27.94■■■□□ 2.06
SNIP1-203ENST00000493916 MAP2K2P36507 400 aa27.93■■■□□ 2.06
SNIP1-203ENST00000493916 GRM1Q13255 1194 aa27.93■■■□□ 2.06
SNIP1-203ENST00000493916 ZDHHC15Q96MV8 337 aa27.93■■■□□ 2.06
SNIP1-203ENST00000493916 NEUROD6Q96NK8 337 aa27.93■■■□□ 2.06
SNIP1-203ENST00000493916 VEZTQ9HBM0 779 aa27.93■■■□□ 2.06
SNIP1-203ENST00000493916 ZBTB40Q9NUA8 1239 aa27.93■■■□□ 2.06
SNIP1-203ENST00000493916 ZNF70Q9UC06 446 aaPredicted RBP27.93■■■□□ 2.06
SNIP1-203ENST00000493916 MAP2K1Q02750 393 aaPredicted RBP27.92■■■□□ 2.06
SNIP1-203ENST00000493916 OS9Q13438 667 aaPredicted RBP27.92■■■□□ 2.06
SNIP1-203ENST00000493916 RASGRF1Q13972 1273 aa27.92■■■□□ 2.06
SNIP1-203ENST00000493916 WBP1LQ9NX94 342 aa27.92■■■□□ 2.06
SNIP1-203ENST00000493916 TNFAIP1Q13829 316 aa27.91■■■□□ 2.06
SNIP1-203ENST00000493916 HHIPL2Q6UWX4 724 aa27.91■■■□□ 2.06
SNIP1-203ENST00000493916 TDRD3Q9H7E2 651 aaKnown RBP27.91■■■□□ 2.06
SNIP1-203ENST00000493916 AOC2O75106 756 aa27.9■■■□□ 2.06
SNIP1-203ENST00000493916 C20orf194Q5TEA3 1177 aa27.9■■■□□ 2.06
SNIP1-203ENST00000493916 ZGPATQ8N5A5 531 aaKnown RBP27.9■■■□□ 2.06
SNIP1-203ENST00000493916 CCDC102AQ96A19 550 aa27.9■■■□□ 2.06
SNIP1-203ENST00000493916 FAM155AB1AL88 458 aaPredicted RBP27.89■■■□□ 2.06
SNIP1-203ENST00000493916 PRDX5P30044 214 aa27.89■■■□□ 2.06
SNIP1-203ENST00000493916 NOGQ13253 232 aa27.89■■■□□ 2.06
SNIP1-203ENST00000493916 TNNI3KQ59H18 835 aa27.89■■■□□ 2.06
SNIP1-203ENST00000493916 FPGT-TNNI3KV9GXZ4 949 aa27.89■■■□□ 2.06
SNIP1-203ENST00000493916 SSC5DA1L4H1 1573 aa27.89■■■□□ 2.05
SNIP1-203ENST00000493916 LDHBP07195 334 aaKnown RBP27.88■■■□□ 2.05
SNIP1-203ENST00000493916 ARID4AP29374 1257 aaPredicted RBP27.88■■■□□ 2.05
SNIP1-203ENST00000493916 ZNF157P51786 506 aaPredicted RBP27.88■■■□□ 2.05
SNIP1-203ENST00000493916 GORABQ5T7V8 394 aa27.88■■■□□ 2.05
SNIP1-203ENST00000493916 APOBEC3HQ6NTF7 200 aaKnown RBP27.88■■■□□ 2.05
SNIP1-203ENST00000493916 RPAP2Q8IXW5 612 aaPredicted RBP27.88■■■□□ 2.05
SNIP1-203ENST00000493916 AIDAQ96BJ3 306 aa27.88■■■□□ 2.05
SNIP1-203ENST00000493916 SLC10A3P09131 477 aa27.87■■■□□ 2.05
SNIP1-203ENST00000493916 RASA3Q14644 834 aa27.87■■■□□ 2.05
SNIP1-203ENST00000493916 MOB2Q70IA6 237 aa27.87■■■□□ 2.05
SNIP1-203ENST00000493916 TTLL12Q14166 644 aaPredicted RBP27.86■■■□□ 2.05
SNIP1-203ENST00000493916 UBE2Q2LH0YL09 131 aa27.85■■■□□ 2.05
SNIP1-203ENST00000493916 FOXN1O15353 648 aa27.85■■■□□ 2.05
SNIP1-203ENST00000493916 SUPT20HL1Q3ZLR7 823 aa27.85■■■□□ 2.05
SNIP1-203ENST00000493916 ARMC9Q7Z3E5 817 aa27.85■■■□□ 2.05
SNIP1-203ENST00000493916 ERC1Q8IUD2 1116 aa27.85■■■□□ 2.05
SNIP1-203ENST00000493916 YTHDC1Q96MU7 727 aaKnown RBP27.85■■■□□ 2.05
SNIP1-203ENST00000493916 DAGLAQ9Y4D2 1042 aa27.85■■■□□ 2.05
SNIP1-203ENST00000493916 UQCRFS1P1P0C7P4 283 aa27.84■■■□□ 2.05
SNIP1-203ENST00000493916 TNNI2P48788 182 aa27.84■■■□□ 2.05
SNIP1-203ENST00000493916 FKBP1CQ5VVH2 108 aa27.84■■■□□ 2.05
SNIP1-203ENST00000493916 RASAL3Q86YV0 1011 aa27.84■■■□□ 2.05
SNIP1-203ENST00000493916 HMG20BQ9P0W2 317 aa27.84■■■□□ 2.05
SNIP1-203ENST00000493916 TCP10L2B9ZVM9 353 aa27.83■■■□□ 2.05
SNIP1-203ENST00000493916 HMMRO75330 724 aa27.83■■■□□ 2.05
SNIP1-203ENST00000493916 DIXDC1Q155Q3 683 aa27.83■■■□□ 2.05
SNIP1-203ENST00000493916 MAP3K11Q16584 847 aa27.83■■■□□ 2.05
SNIP1-203ENST00000493916 HSP90AB4PQ58FF6 505 aa27.83■■■□□ 2.05
SNIP1-203ENST00000493916 SPTY2D1Q68D10 685 aaPredicted RBP27.83■■■□□ 2.05
SNIP1-203ENST00000493916 SIRT2Q8IXJ6 389 aa27.83■■■□□ 2.05
SNIP1-203ENST00000493916 SPATA5Q8NB90 893 aa27.83■■■□□ 2.05
SNIP1-203ENST00000493916 DBNDD2Q9BQY9 259 aa27.83■■■□□ 2.05
SNIP1-203ENST00000493916 TMOD2Q9NZR1 351 aa27.83■■■□□ 2.05
SNIP1-203ENST00000493916 EXOC6BQ9Y2D4 811 aa27.83■■■□□ 2.05
SNIP1-203ENST00000493916 CTCFP49711 727 aaPredicted RBP27.82■■■□□ 2.04
SNIP1-203ENST00000493916 NBPF12Q5TAG4 269 aaPredicted RBP27.82■■■□□ 2.04
SNIP1-203ENST00000493916 TEPSINQ96N21 525 aa27.82■■■□□ 2.04
SNIP1-203ENST00000493916 PPP1R12BO60237 982 aaPredicted RBP27.81■■■□□ 2.04
SNIP1-203ENST00000493916 MCAMP43121 646 aa27.81■■■□□ 2.04
SNIP1-203ENST00000493916 LDLRAD1Q5T700 205 aa27.81■■■□□ 2.04
SNIP1-203ENST00000493916 FAM83AQ86UY5 434 aa27.81■■■□□ 2.04
SNIP1-203ENST00000493916 ZIC5Q96T25 663 aa27.81■■■□□ 2.04
SNIP1-203ENST00000493916 BEGAINQ9BUH8 593 aa27.81■■■□□ 2.04
SNIP1-203ENST00000493916 ABCF2Q9UG63 623 aa27.81■■■□□ 2.04
SNIP1-203ENST00000493916 ANGEL1Q9UNK9 670 aaKnown RBP27.81■■■□□ 2.04
SNIP1-203ENST00000493916 PRKG1Q13976 671 aa27.8■■■□□ 2.04
SNIP1-203ENST00000493916 CCDC158Q5M9N0 1113 aa27.8■■■□□ 2.04
SNIP1-203ENST00000493916 PI16Q6UXB8 463 aa27.8■■■□□ 2.04
SNIP1-203ENST00000493916 DZIP1Q86YF9 867 aaKnown RBP27.8■■■□□ 2.04
SNIP1-203ENST00000493916 ZNF512BQ96KM6 892 aaPredicted RBP27.8■■■□□ 2.04
SNIP1-203ENST00000493916 TMEM39BQ9GZU3 492 aa27.8■■■□□ 2.04
SNIP1-203ENST00000493916 DBNLQ9UJU6 430 aaKnown RBP27.8■■■□□ 2.04
SNIP1-203ENST00000493916 GAKO14976 1311 aa27.8■■■□□ 2.04
SNIP1-203ENST00000493916 RPAP1Q9BWH6 1393 aaPredicted RBP27.79■■■□□ 2.04
SNIP1-203ENST00000493916 UNCXA6NJT0 531 aa27.79■■■□□ 2.04
SNIP1-203ENST00000493916 CACNB3P54284 484 aa27.79■■■□□ 2.04
SNIP1-203ENST00000493916 TTC39AQ5SRH9 613 aa27.79■■■□□ 2.04
SNIP1-203ENST00000493916 SLF2Q8IX21 1173 aa27.79■■■□□ 2.04
SNIP1-203ENST00000493916 EAF2Q96CJ1 260 aaPredicted RBP27.79■■■□□ 2.04
SNIP1-203ENST00000493916 CA12O43570 354 aa27.78■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms