RNA–Protein interactions for RNA: ENST00000493853.1

RBM39-238, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-238ENST00000493853 ZEB1P37275 1124 aaPredicted RBP9.71□□□□□ -0.86
RBM39-238ENST00000493853 MAP1SQ66K74 1059 aaPredicted RBP9.71□□□□□ -0.86
RBM39-238ENST00000493853 BCL2L13Q9BXK5 485 aa9.71□□□□□ -0.86
RBM39-238ENST00000493853 SPDYE5A6NIY4 337 aa9.7□□□□□ -0.86
RBM39-238ENST00000493853 IRS4O14654 1257 aaPredicted RBP9.7□□□□□ -0.86
RBM39-238ENST00000493853 ZNF853P0CG23 659 aa9.7□□□□□ -0.86
RBM39-238ENST00000493853 HSPA1AP0DMV8 641 aaKnown RBP9.7□□□□□ -0.86
RBM39-238ENST00000493853 HSPA1BP0DMV9 641 aaKnown RBP9.7□□□□□ -0.86
RBM39-238ENST00000493853 GJA5P36382 358 aa9.7□□□□□ -0.86
RBM39-238ENST00000493853 EPS15P42566 896 aa9.7□□□□□ -0.86
RBM39-238ENST00000493853 TNIP1Q15025 636 aa9.7□□□□□ -0.86
RBM39-238ENST00000493853 CCDC30Q5VVM6 783 aa9.7□□□□□ -0.86
RBM39-238ENST00000493853 CIAPIN1Q6FI81 312 aa9.7□□□□□ -0.86
RBM39-238ENST00000493853 USP50Q70EL3 339 aaPredicted RBP9.7□□□□□ -0.86
RBM39-238ENST00000493853 PRR7Q8TB68 274 aa9.7□□□□□ -0.86
RBM39-238ENST00000493853 NUDT12Q9BQG2 462 aa9.7□□□□□ -0.86
RBM39-238ENST00000493853 ISCA1Q9BUE6 129 aa9.7□□□□□ -0.86
RBM39-238ENST00000493853 RTFDC1Q9BY42 306 aaPredicted RBP9.7□□□□□ -0.86
RBM39-238ENST00000493853 NSFL1CQ9UNZ2 370 aaKnown RBP9.7□□□□□ -0.86
RBM39-238ENST00000493853 PCDHB15Q9Y5E8 787 aa9.7□□□□□ -0.86
RBM39-238ENST00000493853 TIAM2Q8IVF5 1701 aa9.7□□□□□ -0.86
RBM39-238ENST00000493853 LAMB4A4D0S4 1761 aa9.7□□□□□ -0.86
RBM39-238ENST00000493853 FER1L6Q2WGJ9 1857 aa9.7□□□□□ -0.86
RBM39-238ENST00000493853 SPTLC1O15269 473 aa9.69□□□□□ -0.86
RBM39-238ENST00000493853 RAD17O75943 681 aa9.69□□□□□ -0.86
RBM39-238ENST00000493853 CXCL9Q07325 125 aa9.69□□□□□ -0.86
RBM39-238ENST00000493853 KIAA2012Q0VF49 1180 aa9.69□□□□□ -0.86
RBM39-238ENST00000493853 TRIM32Q13049 653 aa9.69□□□□□ -0.86
RBM39-238ENST00000493853 TRIM28Q13263 835 aaKnown RBP9.69□□□□□ -0.86
RBM39-238ENST00000493853 SF3B3Q15393 1217 aaKnown RBP9.69□□□□□ -0.86
RBM39-238ENST00000493853 CSPP1Q1MSJ5 1256 aa9.69□□□□□ -0.86
RBM39-238ENST00000493853 WASHC4Q2M389 1173 aa9.69□□□□□ -0.86
RBM39-238ENST00000493853 DEFB115Q30KQ5 88 aa9.69□□□□□ -0.86
RBM39-238ENST00000493853 PKDCCQ504Y2 493 aa9.69□□□□□ -0.86
RBM39-238ENST00000493853 COL13A1Q5TAT6 717 aaPredicted RBP9.69□□□□□ -0.86
RBM39-238ENST00000493853 SLC51AQ86UW1 340 aa9.69□□□□□ -0.86
RBM39-238ENST00000493853 TNS4Q8IZW8 715 aa9.69□□□□□ -0.86
RBM39-238ENST00000493853 DLG5Q8TDM6 1919 aa9.69□□□□□ -0.86
RBM39-238ENST00000493853 AIDAQ96BJ3 306 aa9.69□□□□□ -0.86
RBM39-238ENST00000493853 PASKQ96RG2 1323 aa9.69□□□□□ -0.86
RBM39-238ENST00000493853 MYD88Q99836 296 aa9.69□□□□□ -0.86
RBM39-238ENST00000493853 STK31Q9BXU1 1019 aa9.69□□□□□ -0.86
RBM39-238ENST00000493853 PHAXQ9H814 394 aaKnown RBP9.69□□□□□ -0.86
RBM39-238ENST00000493853 PKD2L1Q9P0L9 805 aa9.69□□□□□ -0.86
RBM39-238ENST00000493853 ABT1Q9ULW3 272 aaKnown RBP9.69□□□□□ -0.86
RBM39-238ENST00000493853 ANP32CO43423 234 aa9.68□□□□□ -0.86
RBM39-238ENST00000493853 SCNN1DP51172 638 aa9.68□□□□□ -0.86
RBM39-238ENST00000493853 RPS8P62241 208 aaKnown RBP9.68□□□□□ -0.86
RBM39-238ENST00000493853 ZBTB38Q8NAP3 1195 aaPredicted RBP9.68□□□□□ -0.86
RBM39-238ENST00000493853 C8orf58Q8NAV2 365 aa9.68□□□□□ -0.86
RBM39-238ENST00000493853 CCDC191Q8NCU4 936 aa9.68□□□□□ -0.86
RBM39-238ENST00000493853 ADARB2Q9NS39 739 aaKnown RBP9.68□□□□□ -0.86
RBM39-238ENST00000493853 CNTNAP1P78357 1384 aa9.67□□□□□ -0.86
RBM39-238ENST00000493853 FAM187AA6NFU0 413 aa9.67□□□□□ -0.86
RBM39-238ENST00000493853 H7C1D1 291 aa9.67□□□□□ -0.86
RBM39-238ENST00000493853 GMPSP49915 693 aaPredicted RBP9.67□□□□□ -0.86
RBM39-238ENST00000493853 NEXNQ0ZGT2 675 aa9.67□□□□□ -0.86
RBM39-238ENST00000493853 CCDC152Q4G0S7 254 aa9.67□□□□□ -0.86
RBM39-238ENST00000493853 MYSM1Q5VVJ2 828 aa9.67□□□□□ -0.86
RBM39-238ENST00000493853 CELF1Q92879 486 aaKnown RBP9.67□□□□□ -0.86
RBM39-238ENST00000493853 EYA3Q99504 573 aa9.67□□□□□ -0.86
RBM39-238ENST00000493853 CWC25Q9NXE8 425 aaPredicted RBP9.67□□□□□ -0.86
RBM39-238ENST00000493853 GPRC5DQ9NZD1 345 aa9.67□□□□□ -0.86
RBM39-238ENST00000493853 ANKIB1Q9P2G1 1089 aa9.67□□□□□ -0.86
RBM39-238ENST00000493853 SNED1Q8TER0 1413 aa9.66□□□□□ -0.86
RBM39-238ENST00000493853 PDE8AO60658 829 aa9.66□□□□□ -0.86
RBM39-238ENST00000493853 DGAT1O75907 488 aa9.66□□□□□ -0.86
RBM39-238ENST00000493853 VEGFBP49765 207 aa9.66□□□□□ -0.86
RBM39-238ENST00000493853 CYP4X1Q8N118 509 aa9.66□□□□□ -0.86
RBM39-238ENST00000493853 METTL22Q9BUU2 404 aaPredicted RBP9.66□□□□□ -0.86
RBM39-238ENST00000493853 ZC3H12CQ9C0D7 883 aaKnown RBP9.66□□□□□ -0.86
RBM39-238ENST00000493853 MRS2Q9HD23 443 aa9.66□□□□□ -0.86
RBM39-238ENST00000493853 CNOT7Q9UIV1 285 aaKnown RBP9.66□□□□□ -0.86
RBM39-238ENST00000493853 MAP3K2Q9Y2U5 619 aa9.66□□□□□ -0.86
RBM39-238ENST00000493853 CCDC88AQ3V6T2 1871 aa9.66□□□□□ -0.86
RBM39-238ENST00000493853 NUP98P52948 1817 aa9.66□□□□□ -0.86
RBM39-238ENST00000493853 LCE2BO14633 110 aa9.65□□□□□ -0.86
RBM39-238ENST00000493853 PCCAP05165 728 aaPredicted RBP9.65□□□□□ -0.86
RBM39-238ENST00000493853 CCNYL3P0C7X3 344 aa9.65□□□□□ -0.86
RBM39-238ENST00000493853 GPSM2P81274 684 aa9.65□□□□□ -0.86
RBM39-238ENST00000493853 GRM1Q13255 1194 aa9.65□□□□□ -0.86
RBM39-238ENST00000493853 CCDC27Q2M243 656 aa9.65□□□□□ -0.86
RBM39-238ENST00000493853 WWC1Q8IX03 1113 aa9.65□□□□□ -0.86
RBM39-238ENST00000493853 JARID2Q92833 1246 aaPredicted RBP9.65□□□□□ -0.86
RBM39-238ENST00000493853 TSR2Q969E8 191 aaKnown RBP9.65□□□□□ -0.86
RBM39-238ENST00000493853 CCDC85AQ96PX6 553 aaPredicted RBP9.65□□□□□ -0.86
RBM39-238ENST00000493853 DBNDD1Q9H9R9 158 aa9.65□□□□□ -0.86
RBM39-238ENST00000493853 ARFGEF2Q9Y6D5 1785 aa9.65□□□□□ -0.87
RBM39-238ENST00000493853 CACNA1SQ13698 1873 aa9.64□□□□□ -0.87
RBM39-238ENST00000493853 CDHR2Q9BYE9 1310 aa9.64□□□□□ -0.87
RBM39-238ENST00000493853 PI4KAP2A4QPH2 592 aa9.64□□□□□ -0.87
RBM39-238ENST00000493853 RASSF10A6NK89 507 aa9.64□□□□□ -0.87
RBM39-238ENST00000493853 TRAF5O00463 557 aa9.64□□□□□ -0.87
RBM39-238ENST00000493853 PSMD14O00487 310 aa9.64□□□□□ -0.87
RBM39-238ENST00000493853 ECE1P42892 770 aa9.64□□□□□ -0.87
RBM39-238ENST00000493853 CTCFP49711 727 aaPredicted RBP9.64□□□□□ -0.87
RBM39-238ENST00000493853 MAP2K1Q02750 393 aaPredicted RBP9.64□□□□□ -0.87
RBM39-238ENST00000493853 PTPRNQ16849 979 aa9.64□□□□□ -0.87
RBM39-238ENST00000493853 TWISTNBQ3B726 338 aaPredicted RBP9.64□□□□□ -0.87
RBM39-238ENST00000493853 CCDC184Q52MB2 194 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms