RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 GOLIM4O00461 696 aa21.79■■□□□ 1.08
PDLIM7-208ENST00000493815 KIF3CO14782 793 aa21.79■■□□□ 1.08
PDLIM7-208ENST00000493815 HIRAP54198 1017 aaPredicted RBP21.79■■□□□ 1.08
PDLIM7-208ENST00000493815 MAP4K4O95819 1239 aaPredicted RBP21.79■■□□□ 1.08
PDLIM7-208ENST00000493815 PDE1AP54750 535 aa21.79■■□□□ 1.08
PDLIM7-208ENST00000493815 DIXDC1Q155Q3 683 aa21.79■■□□□ 1.08
PDLIM7-208ENST00000493815 PI4K2BQ8TCG2 481 aa21.79■■□□□ 1.08
PDLIM7-208ENST00000493815 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.79■■□□□ 1.08
PDLIM7-208ENST00000493815 HAUS7Q99871 368 aa21.79■■□□□ 1.08
PDLIM7-208ENST00000493815 LRP2BPQ9P2M1 347 aa21.79■■□□□ 1.08
PDLIM7-208ENST00000493815 HDAC9Q9UKV0 1011 aa21.79■■□□□ 1.08
PDLIM7-208ENST00000493815 RBM5P52756 815 aaKnown RBP eCLIP21.78■■□□□ 1.08
PDLIM7-208ENST00000493815 KIF4BQ2VIQ3 1234 aa21.78■■□□□ 1.08
PDLIM7-208ENST00000493815 PLEKHM2Q8IWE5 1019 aa21.78■■□□□ 1.08
PDLIM7-208ENST00000493815 ZGPATQ8N5A5 531 aaKnown RBP21.78■■□□□ 1.08
PDLIM7-208ENST00000493815 RAI14Q9P0K7 980 aa21.78■■□□□ 1.08
PDLIM7-208ENST00000493815 SCN4AP35499 1836 aa21.78■■□□□ 1.08
PDLIM7-208ENST00000493815 TTC41PQ6P2S7 1318 aa21.78■■□□□ 1.08
PDLIM7-208ENST00000493815 CFAP100Q494V2 611 aa21.77■■□□□ 1.08
PDLIM7-208ENST00000493815 ERICH6Q7L0X2 663 aa21.77■■□□□ 1.08
PDLIM7-208ENST00000493815 ZNF384Q8TF68 577 aa21.77■■□□□ 1.08
PDLIM7-208ENST00000493815 STAP2Q9UGK3 403 aa21.77■■□□□ 1.08
PDLIM7-208ENST00000493815 ASTN2O75129 1339 aaPredicted RBP21.77■■□□□ 1.08
PDLIM7-208ENST00000493815 IDH1O75874 414 aaKnown RBP21.76■■□□□ 1.07
PDLIM7-208ENST00000493815 CRKP46108 304 aa21.76■■□□□ 1.07
PDLIM7-208ENST00000493815 MECOMQ03112 1051 aa21.76■■□□□ 1.07
PDLIM7-208ENST00000493815 NBPF9Q3BBW0 867 aa21.76■■□□□ 1.07
PDLIM7-208ENST00000493815 DZIP1Q86YF9 867 aaKnown RBP21.76■■□□□ 1.07
PDLIM7-208ENST00000493815 PAG1Q9NWQ8 432 aa21.76■■□□□ 1.07
PDLIM7-208ENST00000493815 SUGT1Q9Y2Z0 365 aa21.76■■□□□ 1.07
PDLIM7-208ENST00000493815 ERC2O15083 957 aa21.75■■□□□ 1.07
PDLIM7-208ENST00000493815 SPTY2D1Q68D10 685 aaPredicted RBP21.75■■□□□ 1.07
PDLIM7-208ENST00000493815 AOX1Q06278 1338 aa21.75■■□□□ 1.07
PDLIM7-208ENST00000493815 ADAMTSL1Q8N6G6 1762 aa21.75■■□□□ 1.07
PDLIM7-208ENST00000493815 GLRX3O76003 335 aaKnown RBP21.75■■□□□ 1.07
PDLIM7-208ENST00000493815 DLGAP5Q15398 846 aa21.75■■□□□ 1.07
PDLIM7-208ENST00000493815 USP50Q70EL3 339 aaPredicted RBP21.75■■□□□ 1.07
PDLIM7-208ENST00000493815 PNMA8AQ86V59 439 aaPredicted RBP21.75■■□□□ 1.07
PDLIM7-208ENST00000493815 CLEC11AQ9Y240 323 aa21.75■■□□□ 1.07
PDLIM7-208ENST00000493815 WNT10BO00744 389 aa21.74■■□□□ 1.07
PDLIM7-208ENST00000493815 TEKT1Q969V4 418 aa21.74■■□□□ 1.07
PDLIM7-208ENST00000493815 PRMT6Q96LA8 375 aaPredicted RBP21.74■■□□□ 1.07
PDLIM7-208ENST00000493815 SERPINA10Q9UK55 444 aa21.74■■□□□ 1.07
PDLIM7-208ENST00000493815 SCAF8Q9UPN6 1271 aaKnown RBP21.74■■□□□ 1.07
PDLIM7-208ENST00000493815 MAST3O60307 1309 aa21.73■■□□□ 1.07
PDLIM7-208ENST00000493815 NSUN4Q96CB9 384 aaKnown RBP21.73■■□□□ 1.07
PDLIM7-208ENST00000493815 MYO5AQ9Y4I1 1855 aaKnown RBP21.72■■□□□ 1.07
PDLIM7-208ENST00000493815 SPDYE2BA6NHP3 402 aa21.72■■□□□ 1.07
PDLIM7-208ENST00000493815 CHGBP05060 677 aa21.72■■□□□ 1.07
PDLIM7-208ENST00000493815 SPDYE6P0CI01 402 aa21.72■■□□□ 1.07
PDLIM7-208ENST00000493815 TTF1Q15361 905 aaPredicted RBP21.72■■□□□ 1.07
PDLIM7-208ENST00000493815 SLFNL1Q499Z3 407 aa21.72■■□□□ 1.07
PDLIM7-208ENST00000493815 ZBED3Q96IU2 234 aaPredicted RBP21.72■■□□□ 1.07
PDLIM7-208ENST00000493815 DAGLAQ9Y4D2 1042 aa21.72■■□□□ 1.07
PDLIM7-208ENST00000493815 HDLBPQ00341 1268 aaKnown RBP21.71■■□□□ 1.07
PDLIM7-208ENST00000493815 CLRN2A0PK11 232 aa21.7■■□□□ 1.06
PDLIM7-208ENST00000493815 MMP14P50281 582 aa21.7■■□□□ 1.06
PDLIM7-208ENST00000493815 MAP1SQ66K74 1059 aaPredicted RBP21.7■■□□□ 1.06
PDLIM7-208ENST00000493815 NAA16Q6N069 864 aaPredicted RBP21.7■■□□□ 1.06
PDLIM7-208ENST00000493815 APOBEC3HQ6NTF7 200 aaKnown RBP21.7■■□□□ 1.06
PDLIM7-208ENST00000493815 HHIPL2Q6UWX4 724 aa21.7■■□□□ 1.06
PDLIM7-208ENST00000493815 ADGRA1Q86SQ6 560 aa21.7■■□□□ 1.06
PDLIM7-208ENST00000493815 MAGEB6Q8N7X4 407 aa21.7■■□□□ 1.06
PDLIM7-208ENST00000493815 MTMR14Q8NCE2 650 aa21.7■■□□□ 1.06
PDLIM7-208ENST00000493815 ZDHHC15Q96MV8 337 aa21.7■■□□□ 1.06
PDLIM7-208ENST00000493815 TDRD3Q9H7E2 651 aaKnown RBP21.7■■□□□ 1.06
PDLIM7-208ENST00000493815 GGA3Q9NZ52 723 aa21.7■■□□□ 1.06
PDLIM7-208ENST00000493815 MAP3K12Q12852 859 aa21.69■■□□□ 1.06
PDLIM7-208ENST00000493815 SLC9C2Q5TAH2 1124 aa21.69■■□□□ 1.06
PDLIM7-208ENST00000493815 ANGEL2Q5VTE6 544 aaKnown RBP21.69■■□□□ 1.06
PDLIM7-208ENST00000493815 LDHDQ86WU2 507 aa21.69■■□□□ 1.06
PDLIM7-208ENST00000493815 MRIQ9BWK5 157 aa21.69■■□□□ 1.06
PDLIM7-208ENST00000493815 OSBPL3Q9H4L5 887 aa21.69■■□□□ 1.06
PDLIM7-208ENST00000493815 MROH7-TTC4A0A0A0MT08 1334 aa21.68■■□□□ 1.06
PDLIM7-208ENST00000493815 PDE6AP16499 860 aa21.68■■□□□ 1.06
PDLIM7-208ENST00000493815 CYP7A1P22680 504 aa21.68■■□□□ 1.06
PDLIM7-208ENST00000493815 CACNB3P54284 484 aa21.68■■□□□ 1.06
PDLIM7-208ENST00000493815 GSTO1P78417 241 aa21.68■■□□□ 1.06
PDLIM7-208ENST00000493815 DLK2Q6UY11 383 aa21.68■■□□□ 1.06
PDLIM7-208ENST00000493815 GAKO14976 1311 aa21.67■■□□□ 1.06
PDLIM7-208ENST00000493815 TOMM70O94826 608 aa21.67■■□□□ 1.06
PDLIM7-208ENST00000493815 RGS3P49796 1198 aa21.67■■□□□ 1.06
PDLIM7-208ENST00000493815 TRIM6-TRIM34B2RNG4 842 aa21.66■■□□□ 1.06
PDLIM7-208ENST00000493815 BTDP43251 543 aa21.66■■□□□ 1.06
PDLIM7-208ENST00000493815 SLF2Q8IX21 1173 aa21.66■■□□□ 1.06
PDLIM7-208ENST00000493815 KBTBD3Q8NAB2 608 aa21.66■■□□□ 1.06
PDLIM7-208ENST00000493815 FAM163AQ96GL9 167 aaPredicted RBP21.66■■□□□ 1.06
PDLIM7-208ENST00000493815 VEZTQ9HBM0 779 aa21.66■■□□□ 1.06
PDLIM7-208ENST00000493815 PGAP2Q9UHJ9 254 aa21.66■■□□□ 1.06
PDLIM7-208ENST00000493815 ZNF532Q9HCE3 1301 aa21.66■■□□□ 1.06
PDLIM7-208ENST00000493815 MYH2Q9UKX2 1941 aa21.66■■□□□ 1.06
PDLIM7-208ENST00000493815 MYO1BO43795 1136 aa21.66■■□□□ 1.06
PDLIM7-208ENST00000493815 CHADLQ6NUI6 762 aa21.66■■□□□ 1.06
PDLIM7-208ENST00000493815 CDC42EP5Q6NZY7 148 aa21.66■■□□□ 1.06
PDLIM7-208ENST00000493815 MIGA1Q8NAN2 632 aa21.66■■□□□ 1.06
PDLIM7-208ENST00000493815 ZC3H15Q8WU90 426 aaKnown RBP21.66■■□□□ 1.06
PDLIM7-208ENST00000493815 RILPL2Q969X0 211 aa21.66■■□□□ 1.06
PDLIM7-208ENST00000493815 ZNF70Q9UC06 446 aaPredicted RBP21.66■■□□□ 1.06
PDLIM7-208ENST00000493815 DOCK2Q92608 1830 aa21.65■■□□□ 1.06
PDLIM7-208ENST00000493815 LDHCP07864 332 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms