RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 CCT6AP40227 531 aaKnown RBP8.8□□□□□ -1
BRCA1-221ENST00000493795 RBBP5Q15291 538 aaKnown RBP8.8□□□□□ -1
BRCA1-221ENST00000493795 PDCD2Q16342 344 aaPredicted RBP8.8□□□□□ -1
BRCA1-221ENST00000493795 ATP2B3Q16720 1220 aa8.8□□□□□ -1
BRCA1-221ENST00000493795 CCDC125Q86Z20 511 aa8.8□□□□□ -1
BRCA1-221ENST00000493795 RTL9Q8NET4 1388 aa8.8□□□□□ -1
BRCA1-221ENST00000493795 CDR2Q01850 454 aa8.8□□□□□ -1
BRCA1-221ENST00000493795 ZGPATQ8N5A5 531 aaKnown RBP8.8□□□□□ -1
BRCA1-221ENST00000493795 NAP1L4Q99733 375 aaKnown RBP8.8□□□□□ -1
BRCA1-221ENST00000493795 MIS18AQ9NYP9 233 aa8.8□□□□□ -1
BRCA1-221ENST00000493795 ANKRD50Q9ULJ7 1429 aa8.8□□□□□ -1
BRCA1-221ENST00000493795 CALML3P27482 149 aa8.79□□□□□ -1
BRCA1-221ENST00000493795 KRT2P35908 639 aa8.79□□□□□ -1
BRCA1-221ENST00000493795 EVCP57679 992 aa8.79□□□□□ -1
BRCA1-221ENST00000493795 PPP2R5CQ13362 524 aa8.79□□□□□ -1
BRCA1-221ENST00000493795 DBN1Q16643 649 aa8.79□□□□□ -1
BRCA1-221ENST00000493795 DCAF17Q5H9S7 520 aaPredicted RBP8.79□□□□□ -1
BRCA1-221ENST00000493795 ANKRD20A3Q5VUR7 823 aa8.79□□□□□ -1
BRCA1-221ENST00000493795 THEMISQ8N1K5 641 aaPredicted RBP8.79□□□□□ -1
BRCA1-221ENST00000493795 RRP36Q96EU6 259 aaKnown RBP8.79□□□□□ -1
BRCA1-221ENST00000493795 TRIM35Q9UPQ4 493 aa8.79□□□□□ -1
BRCA1-221ENST00000493795 KRT9P35527 623 aa8.79□□□□□ -1
BRCA1-221ENST00000493795 PPP1R2P41236 205 aa8.79□□□□□ -1
BRCA1-221ENST00000493795 FAM69CQ0P6D2 419 aa8.79□□□□□ -1
BRCA1-221ENST00000493795 USP48Q86UV5 1035 aa8.79□□□□□ -1
BRCA1-221ENST00000493795 SMAP1Q8IYB5 467 aaPredicted RBP8.79□□□□□ -1
BRCA1-221ENST00000493795 NAPGQ99747 312 aaPredicted RBP8.79□□□□□ -1
BRCA1-221ENST00000493795 BAG1Q99933 345 aaPredicted RBP8.79□□□□□ -1
BRCA1-221ENST00000493795 EIF2AQ9BY44 585 aaKnown RBP8.79□□□□□ -1
BRCA1-221ENST00000493795 PPME1Q9Y570 386 aa8.79□□□□□ -1
BRCA1-221ENST00000493795 PTPRCP08575 1304 aa8.79□□□□□ -1
BRCA1-221ENST00000493795 OPHN1O60890 802 aa8.79□□□□□ -1
BRCA1-221ENST00000493795 LMOD1P29536 600 aaPredicted RBP8.79□□□□□ -1
BRCA1-221ENST00000493795 MARCKSP29966 332 aaPredicted RBP8.79□□□□□ -1
BRCA1-221ENST00000493795 TRIM14Q14142 442 aa8.79□□□□□ -1
BRCA1-221ENST00000493795 LRRC43Q8N309 656 aa8.79□□□□□ -1
BRCA1-221ENST00000493795 BRF1Q92994 677 aa8.79□□□□□ -1
BRCA1-221ENST00000493795 CABS1Q96KC9 395 aa8.79□□□□□ -1
BRCA1-221ENST00000493795 FNBP1Q96RU3 617 aa8.79□□□□□ -1
BRCA1-221ENST00000493795 AKR1B15C9JRZ8 316 aaPredicted RBP8.79□□□□□ -1
BRCA1-221ENST00000493795 MTMR3Q13615 1198 aa8.79□□□□□ -1
BRCA1-221ENST00000493795 PLS1Q14651 629 aa8.79□□□□□ -1
BRCA1-221ENST00000493795 UTP14CQ5TAP6 766 aaKnown RBP8.79□□□□□ -1
BRCA1-221ENST00000493795 CYB5RLQ6IPT4 315 aa8.79□□□□□ -1
BRCA1-221ENST00000493795 ABCC11Q96J66 1382 aa8.79□□□□□ -1
BRCA1-221ENST00000493795 SLC12A2P55011 1212 aa8.79□□□□□ -1
BRCA1-221ENST00000493795 PPFIA1Q13136 1202 aa8.79□□□□□ -1
BRCA1-221ENST00000493795 TBC1D9Q6ZT07 1266 aa8.79□□□□□ -1
BRCA1-221ENST00000493795 ERO1AQ96HE7 468 aa8.79□□□□□ -1
BRCA1-221ENST00000493795 NOX5Q96PH1 765 aa8.79□□□□□ -1
BRCA1-221ENST00000493795 TRIM6Q9C030 488 aaPredicted RBP8.79□□□□□ -1
BRCA1-221ENST00000493795 DACT1Q9NYF0 836 aa8.79□□□□□ -1
BRCA1-221ENST00000493795 SPTLC2O15270 562 aa8.78□□□□□ -1
BRCA1-221ENST00000493795 PPFIA3O75145 1194 aa8.78□□□□□ -1
BRCA1-221ENST00000493795 GCKP35557 465 aa8.78□□□□□ -1
BRCA1-221ENST00000493795 BIRC3Q13489 604 aa8.78□□□□□ -1
BRCA1-221ENST00000493795 RPS6KA2Q15349 733 aa8.78□□□□□ -1
BRCA1-221ENST00000493795 LDHAL6AQ6ZMR3 332 aa8.78□□□□□ -1
BRCA1-221ENST00000493795 PPP1R42Q7Z4L9 355 aa8.78□□□□□ -1
BRCA1-221ENST00000493795 ATP2A3Q93084 1043 aa8.78□□□□□ -1
BRCA1-221ENST00000493795 SDCCAG3Q96C92 435 aa8.78□□□□□ -1
BRCA1-221ENST00000493795 RILPQ96NA2 401 aa8.78□□□□□ -1
BRCA1-221ENST00000493795 THEGQ9P2T0 379 aa8.78□□□□□ -1
BRCA1-221ENST00000493795 MAP2K2P36507 400 aa8.78□□□□□ -1
BRCA1-221ENST00000493795 PHEXP78562 749 aa8.78□□□□□ -1
BRCA1-221ENST00000493795 CCDC93Q567U6 631 aa8.78□□□□□ -1
BRCA1-221ENST00000493795 ZKSCAN3Q9BRR0 538 aa8.78□□□□□ -1
BRCA1-221ENST00000493795 SLC4A4Q9Y6R1 1079 aa8.78□□□□□ -1
BRCA1-221ENST00000493795 ERBINQ96RT1 1412 aa8.78□□□□□ -1
BRCA1-221ENST00000493795 TROVE2P10155 538 aaKnown RBP eCLIP8.78□□□□□ -1
BRCA1-221ENST00000493795 TYRO3Q06418 890 aa8.78□□□□□ -1
BRCA1-221ENST00000493795 PPP2R5DQ14738 602 aa8.78□□□□□ -1
BRCA1-221ENST00000493795 MORC4Q8TE76 937 aa8.78□□□□□ -1
BRCA1-221ENST00000493795 PPFIA4O75335 1185 aa8.78□□□□□ -1
BRCA1-221ENST00000493795 ST5P78524 1137 aa8.78□□□□□ -1
BRCA1-221ENST00000493795 ZBTB9Q96C00 473 aa8.78□□□□□ -1
BRCA1-221ENST00000493795 TMX3Q96JJ7 454 aa8.78□□□□□ -1
BRCA1-221ENST00000493795 SNRKQ9NRH2 765 aa8.78□□□□□ -1
BRCA1-221ENST00000493795 DBF4Q9UBU7 674 aaPredicted RBP8.78□□□□□ -1
BRCA1-221ENST00000493795 BAG5Q9UL15 447 aa8.78□□□□□ -1
BRCA1-221ENST00000493795 STX17P56962 302 aa8.77□□□□□ -1
BRCA1-221ENST00000493795 ASIC2Q16515 512 aa8.77□□□□□ -1
BRCA1-221ENST00000493795 KMT5BQ4FZB7 885 aa8.77□□□□□ -1
BRCA1-221ENST00000493795 PPP4R1Q8TF05 950 aa8.77□□□□□ -1
BRCA1-221ENST00000493795 IFNKQ9P0W0 207 aa8.77□□□□□ -1
BRCA1-221ENST00000493795 TTF2Q9UNY4 1162 aaKnown RBP8.77□□□□□ -1
BRCA1-221ENST00000493795 HGSO14964 777 aaPredicted RBP8.77□□□□□ -1.01
BRCA1-221ENST00000493795 RNF40O75150 1001 aa8.77□□□□□ -1.01
BRCA1-221ENST00000493795 MAN1A1P33908 653 aa8.77□□□□□ -1.01
BRCA1-221ENST00000493795 HS1BP3Q53T59 392 aa8.77□□□□□ -1.01
BRCA1-221ENST00000493795 MUM1L1Q5H9M0 696 aa8.77□□□□□ -1.01
BRCA1-221ENST00000493795 TEX13AQ9BXU3 409 aaPredicted RBP8.77□□□□□ -1.01
BRCA1-221ENST00000493795 CLSTN2Q9H4D0 955 aa8.77□□□□□ -1.01
BRCA1-221ENST00000493795 ASIC3Q9UHC3 531 aa8.77□□□□□ -1.01
BRCA1-221ENST00000493795 F13A1P00488 732 aa8.77□□□□□ -1.01
BRCA1-221ENST00000493795 BMP2KLQ5H9B9 411 aa8.77□□□□□ -1.01
BRCA1-221ENST00000493795 TTC22Q5TAA0 569 aa8.77□□□□□ -1.01
BRCA1-221ENST00000493795 AP1ARQ63HQ0 302 aa8.77□□□□□ -1.01
BRCA1-221ENST00000493795 NECAB1Q8N987 351 aa8.77□□□□□ -1.01
BRCA1-221ENST00000493795 PDZD8Q8NEN9 1154 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms