RNA–Protein interactions for RNA: ENST00000493743.1

SEMA3F-209, Transcript of semaphorin 3F, humanhuman

TSL 3

Gene SEMA3F, Length 520 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-209ENST00000493743 FAM84BQ96KN1 310 aaPredicted RBP9.85□□□□□ -0.83
SEMA3F-209ENST00000493743 SERPINA10Q9UK55 444 aa9.85□□□□□ -0.83
SEMA3F-209ENST00000493743 UTYO14607 1347 aa9.84□□□□□ -0.83
SEMA3F-209ENST00000493743 MROH5Q6ZUA9 1318 aa9.84□□□□□ -0.83
SEMA3F-209ENST00000493743 USP2O75604 605 aaPredicted RBP9.84□□□□□ -0.83
SEMA3F-209ENST00000493743 NBPF7P0C2Y1 421 aaPredicted RBP9.84□□□□□ -0.83
SEMA3F-209ENST00000493743 PRPF38BQ5VTL8 546 aaKnown RBP9.84□□□□□ -0.83
SEMA3F-209ENST00000493743 OTUD7BQ6GQQ9 843 aa9.84□□□□□ -0.83
SEMA3F-209ENST00000493743 FAM9BQ8IZU0 186 aa9.84□□□□□ -0.83
SEMA3F-209ENST00000493743 PUS3Q9BZE2 481 aaKnown RBP9.84□□□□□ -0.83
SEMA3F-209ENST00000493743 TDRD3Q9H7E2 651 aaKnown RBP9.84□□□□□ -0.83
SEMA3F-209ENST00000493743 ZNF70Q9UC06 446 aaPredicted RBP9.84□□□□□ -0.83
SEMA3F-209ENST00000493743 RIPOR2Q9Y4F9 1068 aa9.84□□□□□ -0.83
SEMA3F-209ENST00000493743 TRIM17Q9Y577 477 aa9.84□□□□□ -0.83
SEMA3F-209ENST00000493743 GJA5P36382 358 aa9.83□□□□□ -0.84
SEMA3F-209ENST00000493743 CRKP46108 304 aa9.83□□□□□ -0.84
SEMA3F-209ENST00000493743 TNNI2P48788 182 aa9.83□□□□□ -0.84
SEMA3F-209ENST00000493743 RABL6Q3YEC7 729 aaPredicted RBP9.83□□□□□ -0.84
SEMA3F-209ENST00000493743 OTOP1Q7RTM1 612 aa9.83□□□□□ -0.84
SEMA3F-209ENST00000493743 VPS37DQ86XT2 251 aa9.83□□□□□ -0.84
SEMA3F-209ENST00000493743 DZIP1LQ8IYY4 767 aaKnown RBP9.83□□□□□ -0.84
SEMA3F-209ENST00000493743 ERO1AQ96HE7 468 aa9.83□□□□□ -0.84
SEMA3F-209ENST00000493743 BICC1Q9H694 974 aaKnown RBP9.83□□□□□ -0.84
SEMA3F-209ENST00000493743 ZSWIM8A7E2V4 1837 aa9.83□□□□□ -0.84
SEMA3F-209ENST00000493743 DOCK2Q92608 1830 aa9.82□□□□□ -0.84
SEMA3F-209ENST00000493743 TESPA1A2RU30 521 aaPredicted RBP9.82□□□□□ -0.84
SEMA3F-209ENST00000493743 HMGB1P09429 215 aaKnown RBP9.82□□□□□ -0.84
SEMA3F-209ENST00000493743 HDLBPQ00341 1268 aaKnown RBP9.82□□□□□ -0.84
SEMA3F-209ENST00000493743 CRHR2Q13324 411 aa9.82□□□□□ -0.84
SEMA3F-209ENST00000493743 CAVIN4Q5BKX8 364 aa9.82□□□□□ -0.84
SEMA3F-209ENST00000493743 METTL24Q5JXM2 366 aa9.82□□□□□ -0.84
SEMA3F-209ENST00000493743 INTS3Q68E01 1043 aaKnown RBP9.82□□□□□ -0.84
SEMA3F-209ENST00000493743 FBXO33Q7Z6M2 555 aa9.82□□□□□ -0.84
SEMA3F-209ENST00000493743 TBC1D22AQ8WUA7 517 aa9.82□□□□□ -0.84
SEMA3F-209ENST00000493743 OPTNQ96CV9 577 aa9.82□□□□□ -0.84
SEMA3F-209ENST00000493743 PKNOX2Q96KN3 472 aa9.82□□□□□ -0.84
SEMA3F-209ENST00000493743 TEPSINQ96N21 525 aa9.82□□□□□ -0.84
SEMA3F-209ENST00000493743 ELP3Q9H9T3 547 aa9.82□□□□□ -0.84
SEMA3F-209ENST00000493743 MYH2Q9UKX2 1941 aa9.82□□□□□ -0.84
SEMA3F-209ENST00000493743 PTPRCP08575 1304 aa9.82□□□□□ -0.84
SEMA3F-209ENST00000493743 ZNF521Q96K83 1311 aa9.82□□□□□ -0.84
SEMA3F-209ENST00000493743 TCP10L2B9ZVM9 353 aa9.81□□□□□ -0.84
SEMA3F-209ENST00000493743 FRAT2O75474 233 aaPredicted RBP9.81□□□□□ -0.84
SEMA3F-209ENST00000493743 PDE8BO95263 885 aa9.81□□□□□ -0.84
SEMA3F-209ENST00000493743 PDE4CQ08493 712 aa9.81□□□□□ -0.84
SEMA3F-209ENST00000493743 CHAF1AQ13111 956 aaPredicted RBP9.81□□□□□ -0.84
SEMA3F-209ENST00000493743 LRRC24Q50LG9 513 aa9.81□□□□□ -0.84
SEMA3F-209ENST00000493743 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.81□□□□□ -0.84
SEMA3F-209ENST00000493743 CDAN1Q8IWY9 1227 aa9.81□□□□□ -0.84
SEMA3F-209ENST00000493743 ANKRD44Q8N8A2 993 aa9.81□□□□□ -0.84
SEMA3F-209ENST00000493743 VGLL2Q8N8G2 317 aa9.81□□□□□ -0.84
SEMA3F-209ENST00000493743 CD99L2Q8TCZ2 262 aa9.81□□□□□ -0.84
SEMA3F-209ENST00000493743 TEKT1Q969V4 418 aa9.81□□□□□ -0.84
SEMA3F-209ENST00000493743 PTPN18Q99952 460 aa9.81□□□□□ -0.84
SEMA3F-209ENST00000493743 TMEM39BQ9GZU3 492 aa9.81□□□□□ -0.84
SEMA3F-209ENST00000493743 IQSEC3Q9UPP2 1182 aaPredicted RBP9.81□□□□□ -0.84
SEMA3F-209ENST00000493743 CSADQ9Y600 493 aa9.81□□□□□ -0.84
SEMA3F-209ENST00000493743 MGAMO43451 1857 aa9.81□□□□□ -0.84
SEMA3F-209ENST00000493743 MAST3O60307 1309 aa9.81□□□□□ -0.84
SEMA3F-209ENST00000493743 KIF16BQ96L93 1317 aa9.81□□□□□ -0.84
SEMA3F-209ENST00000493743 KIAA0100Q14667 2235 aaKnown RBP9.8□□□□□ -0.84
SEMA3F-209ENST00000493743 MAP3K9P80192 1104 aa9.8□□□□□ -0.84
SEMA3F-209ENST00000493743 SP3Q02447 781 aa9.8□□□□□ -0.84
SEMA3F-209ENST00000493743 VGLL4Q14135 290 aa9.8□□□□□ -0.84
SEMA3F-209ENST00000493743 GRIK5Q16478 980 aa9.8□□□□□ -0.84
SEMA3F-209ENST00000493743 MRPL50Q8N5N7 158 aaKnown RBP9.8□□□□□ -0.84
SEMA3F-209ENST00000493743 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.8□□□□□ -0.84
SEMA3F-209ENST00000493743 MS4A4AQ96JQ5 239 aa9.8□□□□□ -0.84
SEMA3F-209ENST00000493743 EFCC1Q9HA90 598 aa9.8□□□□□ -0.84
SEMA3F-209ENST00000493743 TMOD2Q9NZR1 351 aa9.8□□□□□ -0.84
SEMA3F-209ENST00000493743 PCDH10Q9P2E7 1040 aa9.8□□□□□ -0.84
SEMA3F-209ENST00000493743 PTPN22Q9Y2R2 807 aa9.8□□□□□ -0.84
SEMA3F-209ENST00000493743 RPAP1Q9BWH6 1393 aaPredicted RBP9.79□□□□□ -0.84
SEMA3F-209ENST00000493743 CCL15-CCL14A0A0B4J2E2 113 aa9.79□□□□□ -0.84
SEMA3F-209ENST00000493743 GTF2A2P52657 109 aa9.79□□□□□ -0.84
SEMA3F-209ENST00000493743 PUM3Q15397 648 aaKnown RBP9.79□□□□□ -0.84
SEMA3F-209ENST00000493743 TAF1CQ15572 869 aaPredicted RBP9.79□□□□□ -0.84
SEMA3F-209ENST00000493743 CCL15Q16663 113 aa9.79□□□□□ -0.84
SEMA3F-209ENST00000493743 KLHDC4Q8TBB5 520 aa9.79□□□□□ -0.84
SEMA3F-209ENST00000493743 CNKSR2Q8WXI2 1034 aa9.79□□□□□ -0.84
SEMA3F-209ENST00000493743 BRI3BPQ8WY22 251 aa9.79□□□□□ -0.84
SEMA3F-209ENST00000493743 HOOK2Q96ED9 719 aa9.79□□□□□ -0.84
SEMA3F-209ENST00000493743 OTUD5Q96G74 571 aa9.79□□□□□ -0.84
SEMA3F-209ENST00000493743 ZDHHC15Q96MV8 337 aa9.79□□□□□ -0.84
SEMA3F-209ENST00000493743 MRIQ9BWK5 157 aa9.79□□□□□ -0.84
SEMA3F-209ENST00000493743 SUGT1Q9Y2Z0 365 aa9.79□□□□□ -0.84
SEMA3F-209ENST00000493743 PTPRFP10586 1907 aa9.79□□□□□ -0.84
SEMA3F-209ENST00000493743 POTEFA5A3E0 1075 aa9.78□□□□□ -0.84
SEMA3F-209ENST00000493743 SPDYE5A6NIY4 337 aa9.78□□□□□ -0.84
SEMA3F-209ENST00000493743 E9PSI1 815 aa9.78□□□□□ -0.84
SEMA3F-209ENST00000493743 IFIT1P09914 478 aaKnown RBP9.78□□□□□ -0.84
SEMA3F-209ENST00000493743 FGFR2P21802 821 aa9.78□□□□□ -0.84
SEMA3F-209ENST00000493743 BCAMP50895 628 aa9.78□□□□□ -0.84
SEMA3F-209ENST00000493743 CACNB3P54284 484 aa9.78□□□□□ -0.84
SEMA3F-209ENST00000493743 ARHGEF6Q15052 776 aa9.78□□□□□ -0.84
SEMA3F-209ENST00000493743 FKBP1CQ5VVH2 108 aa9.78□□□□□ -0.84
SEMA3F-209ENST00000493743 FAM83AQ86UY5 434 aa9.78□□□□□ -0.84
SEMA3F-209ENST00000493743 SSH1Q8WYL5 1049 aa9.78□□□□□ -0.84
SEMA3F-209ENST00000493743 ARMC5Q96C12 935 aa9.78□□□□□ -0.84
SEMA3F-209ENST00000493743 USP44Q9H0E7 712 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms