RNA–Protein interactions for RNA: ENST00000493726.1

LRCH3-218, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 733 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-218ENST00000493726 CCDC7Q96M83 1385 aa10.61□□□□□ -0.71
LRCH3-218ENST00000493726 SBF2Q86WG5 1849 aa10.61□□□□□ -0.71
LRCH3-218ENST00000493726 EVA1CP58658 441 aa10.6□□□□□ -0.71
LRCH3-218ENST00000493726 CDCA8Q53HL2 280 aa10.6□□□□□ -0.71
LRCH3-218ENST00000493726 LRRC69Q6ZNQ3 347 aa10.6□□□□□ -0.71
LRCH3-218ENST00000493726 FAM196AQ6ZSG2 479 aa10.6□□□□□ -0.71
LRCH3-218ENST00000493726 ANKRD26Q9UPS8 1709 aa10.6□□□□□ -0.71
LRCH3-218ENST00000493726 SERTM1A2A2V5 107 aa10.59□□□□□ -0.71
LRCH3-218ENST00000493726 PALM3A6NDB9 673 aaPredicted RBP10.59□□□□□ -0.71
LRCH3-218ENST00000493726 DKK1O94907 266 aa10.59□□□□□ -0.71
LRCH3-218ENST00000493726 AMPD1P23109 780 aa10.59□□□□□ -0.71
LRCH3-218ENST00000493726 SLCO4C1Q6ZQN7 724 aa10.59□□□□□ -0.71
LRCH3-218ENST00000493726 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.59□□□□□ -0.71
LRCH3-218ENST00000493726 LARGE2Q8N3Y3 721 aa10.59□□□□□ -0.71
LRCH3-218ENST00000493726 TMC1Q8TDI8 760 aa10.59□□□□□ -0.71
LRCH3-218ENST00000493726 MAFBQ9Y5Q3 323 aaPredicted RBP10.59□□□□□ -0.71
LRCH3-218ENST00000493726 RTL1A6NKG5 1358 aa10.59□□□□□ -0.71
LRCH3-218ENST00000493726 KIF24Q5T7B8 1368 aa10.59□□□□□ -0.71
LRCH3-218ENST00000493726 OVOS2A0A0G2JMS6 1433 aa10.58□□□□□ -0.72
LRCH3-218ENST00000493726 TNS2Q63HR2 1409 aa10.58□□□□□ -0.72
LRCH3-218ENST00000493726 KIF20BQ96Q89 1820 aa10.58□□□□□ -0.72
LRCH3-218ENST00000493726 EML1O00423 815 aa10.58□□□□□ -0.72
LRCH3-218ENST00000493726 FYB1O15117 783 aa10.58□□□□□ -0.72
LRCH3-218ENST00000493726 RASA1P20936 1047 aa10.58□□□□□ -0.72
LRCH3-218ENST00000493726 IP6K1Q92551 441 aa10.58□□□□□ -0.72
LRCH3-218ENST00000493726 DCAF5Q96JK2 942 aa10.58□□□□□ -0.72
LRCH3-218ENST00000493726 CALR3Q96L12 384 aaKnown RBP10.58□□□□□ -0.72
LRCH3-218ENST00000493726 KLF15Q9UIH9 416 aa10.58□□□□□ -0.72
LRCH3-218ENST00000493726 HCN4Q9Y3Q4 1203 aa10.58□□□□□ -0.72
LRCH3-218ENST00000493726 LGR5O75473 907 aa10.57□□□□□ -0.72
LRCH3-218ENST00000493726 FAM157BP0CG42 384 aa10.57□□□□□ -0.72
LRCH3-218ENST00000493726 ARAFP10398 606 aa10.57□□□□□ -0.72
LRCH3-218ENST00000493726 GRIN2CQ14957 1233 aa10.57□□□□□ -0.72
LRCH3-218ENST00000493726 SIX5Q8N196 739 aa10.57□□□□□ -0.72
LRCH3-218ENST00000493726 C7orf43Q8WVR3 580 aa10.57□□□□□ -0.72
LRCH3-218ENST00000493726 CAMKK2Q96RR4 588 aa10.57□□□□□ -0.72
LRCH3-218ENST00000493726 NCAPD2Q15021 1401 aa10.57□□□□□ -0.72
LRCH3-218ENST00000493726 BAG6P46379 1132 aa10.56□□□□□ -0.72
LRCH3-218ENST00000493726 PCBP4P57723 403 aaKnown RBP10.56□□□□□ -0.72
LRCH3-218ENST00000493726 FAM182BQ5T319 152 aa10.56□□□□□ -0.72
LRCH3-218ENST00000493726 RHPN1Q8TCX5 695 aa10.56□□□□□ -0.72
LRCH3-218ENST00000493726 MAP3K19Q56UN5 1328 aa10.56□□□□□ -0.72
LRCH3-218ENST00000493726 NUP188Q5SRE5 1749 aa10.55□□□□□ -0.72
LRCH3-218ENST00000493726 A6NJR5 290 aa10.55□□□□□ -0.72
LRCH3-218ENST00000493726 EPXP11678 715 aa10.55□□□□□ -0.72
LRCH3-218ENST00000493726 HOXB4P17483 251 aaPredicted RBP10.55□□□□□ -0.72
LRCH3-218ENST00000493726 PSMA6P60900 246 aaKnown RBP10.55□□□□□ -0.72
LRCH3-218ENST00000493726 SAMD5Q5TGI4 173 aa10.55□□□□□ -0.72
LRCH3-218ENST00000493726 TOM1L2Q6ZVM7 507 aa10.55□□□□□ -0.72
LRCH3-218ENST00000493726 COG3Q96JB2 828 aa10.55□□□□□ -0.72
LRCH3-218ENST00000493726 BTBD6Q96KE9 485 aa10.55□□□□□ -0.72
LRCH3-218ENST00000493726 PPP1R12CQ9BZL4 782 aa10.55□□□□□ -0.72
LRCH3-218ENST00000493726 MARK1Q9P0L2 795 aa10.55□□□□□ -0.72
LRCH3-218ENST00000493726 USP35Q9P2H5 1018 aa10.55□□□□□ -0.72
LRCH3-218ENST00000493726 NHSQ6T4R5 1651 aa10.54□□□□□ -0.72
LRCH3-218ENST00000493726 EFSO43281 561 aa10.54□□□□□ -0.72
LRCH3-218ENST00000493726 PDE3BQ13370 1112 aa10.54□□□□□ -0.72
LRCH3-218ENST00000493726 SF3B2Q13435 895 aaKnown RBP10.54□□□□□ -0.72
LRCH3-218ENST00000493726 DDB1Q16531 1140 aa10.54□□□□□ -0.72
LRCH3-218ENST00000493726 PLA2G4EQ3MJ16 856 aa10.54□□□□□ -0.72
LRCH3-218ENST00000493726 FCHSD1Q86WN1 690 aa10.54□□□□□ -0.72
LRCH3-218ENST00000493726 MARCH10Q8NA82 808 aaPredicted RBP10.54□□□□□ -0.72
LRCH3-218ENST00000493726 HSH2DQ96JZ2 352 aa10.54□□□□□ -0.72
LRCH3-218ENST00000493726 SHANK3Q9BYB0 1731 aa10.54□□□□□ -0.72
LRCH3-218ENST00000493726 PHACTR1Q9C0D0 580 aa10.54□□□□□ -0.72
LRCH3-218ENST00000493726 NEUROD4Q9HD90 331 aa10.54□□□□□ -0.72
LRCH3-218ENST00000493726 MKL2Q9ULH7 1088 aa10.54□□□□□ -0.72
LRCH3-218ENST00000493726 PRR12Q9ULL5 1215 aa10.54□□□□□ -0.72
LRCH3-218ENST00000493726 RBM19Q9Y4C8 960 aaKnown RBP10.54□□□□□ -0.72
LRCH3-218ENST00000493726 M0R2N6 131 aa10.53□□□□□ -0.72
LRCH3-218ENST00000493726 PLSCR1O15162 318 aa10.53□□□□□ -0.72
LRCH3-218ENST00000493726 C21orf2O43822 256 aa10.53□□□□□ -0.72
LRCH3-218ENST00000493726 PPP1R12BO60237 982 aaPredicted RBP10.53□□□□□ -0.72
LRCH3-218ENST00000493726 ITGB2P05107 769 aa10.53□□□□□ -0.72
LRCH3-218ENST00000493726 ADH6P28332 368 aa10.53□□□□□ -0.72
LRCH3-218ENST00000493726 HOXC9P31274 260 aa10.53□□□□□ -0.72
LRCH3-218ENST00000493726 CRTC2Q53ET0 693 aaPredicted RBP10.53□□□□□ -0.72
LRCH3-218ENST00000493726 GAS2L2Q8NHY3 880 aa10.53□□□□□ -0.72
LRCH3-218ENST00000493726 ANKRD24Q8TF21 1146 aa10.53□□□□□ -0.72
LRCH3-218ENST00000493726 INSRP06213 1382 aa10.52□□□□□ -0.72
LRCH3-218ENST00000493726 PLEKHG2Q9H7P9 1386 aa10.52□□□□□ -0.72
LRCH3-218ENST00000493726 NSD3Q9BZ95 1437 aa10.52□□□□□ -0.73
LRCH3-218ENST00000493726 TRIM37O94972 964 aa10.52□□□□□ -0.73
LRCH3-218ENST00000493726 HSPA5P11021 654 aaKnown RBP10.52□□□□□ -0.73
LRCH3-218ENST00000493726 SFSWAPQ12872 951 aaKnown RBP10.52□□□□□ -0.73
LRCH3-218ENST00000493726 CCER1Q8TC90 406 aaPredicted RBP10.52□□□□□ -0.73
LRCH3-218ENST00000493726 SUV39H2Q9H5I1 410 aa10.52□□□□□ -0.73
LRCH3-218ENST00000493726 SMG6Q86US8 1419 aaKnown RBP10.51□□□□□ -0.73
LRCH3-218ENST00000493726 COL8A1P27658 744 aa10.51□□□□□ -0.73
LRCH3-218ENST00000493726 SEC13P55735 322 aa10.51□□□□□ -0.73
LRCH3-218ENST00000493726 LINC00114Q6XXX2 140 aa10.51□□□□□ -0.73
LRCH3-218ENST00000493726 SCG3Q8WXD2 468 aaKnown RBP10.51□□□□□ -0.73
LRCH3-218ENST00000493726 CHMP3Q9Y3E7 222 aa10.51□□□□□ -0.73
LRCH3-218ENST00000493726 RGPD2P0DJD1 1756 aa10.51□□□□□ -0.73
LRCH3-218ENST00000493726 FLT4P35916 1363 aa10.51□□□□□ -0.73
LRCH3-218ENST00000493726 IL2RBP14784 551 aa10.5□□□□□ -0.73
LRCH3-218ENST00000493726 LMOD1P29536 600 aaPredicted RBP10.5□□□□□ -0.73
LRCH3-218ENST00000493726 R3HDM1Q15032 1099 aaKnown RBP10.5□□□□□ -0.73
LRCH3-218ENST00000493726 EZH2Q15910 746 aaKnown RBP10.5□□□□□ -0.73
LRCH3-218ENST00000493726 ZNF468Q5VIY5 522 aaPredicted RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms