RNA–Protein interactions for RNA: ENST00000493551.1

CLIP4-212, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 3

Gene CLIP4, Length 627 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-212ENST00000493551 CARMIL1Q5VZK9 1371 aa7.51□□□□□ -1.21
CLIP4-212ENST00000493551 DBX1A6NMT0 343 aa7.51□□□□□ -1.21
CLIP4-212ENST00000493551 CYP2E1P05181 493 aaPredicted RBP7.51□□□□□ -1.21
CLIP4-212ENST00000493551 NFKBIBQ15653 356 aa7.51□□□□□ -1.21
CLIP4-212ENST00000493551 C12orf50Q8NA57 414 aaPredicted RBP7.51□□□□□ -1.21
CLIP4-212ENST00000493551 SMG8Q8ND04 991 aaKnown RBP7.51□□□□□ -1.21
CLIP4-212ENST00000493551 SUGCTQ9HAC7 445 aa7.51□□□□□ -1.21
CLIP4-212ENST00000493551 CYP4F12Q9HCS2 524 aa7.51□□□□□ -1.21
CLIP4-212ENST00000493551 PAK6Q9NQU5 681 aaPredicted RBP7.51□□□□□ -1.21
CLIP4-212ENST00000493551 IQGAP2Q13576 1575 aa7.5□□□□□ -1.21
CLIP4-212ENST00000493551 TEX14Q8IWB6 1497 aa7.5□□□□□ -1.21
CLIP4-212ENST00000493551 TIAF1O95411 115 aa7.5□□□□□ -1.21
CLIP4-212ENST00000493551 PAPLNO95428 1278 aa7.5□□□□□ -1.21
CLIP4-212ENST00000493551 C19orf57Q0VDD7 668 aa7.5□□□□□ -1.21
CLIP4-212ENST00000493551 ZNF648Q5T619 568 aaPredicted RBP7.5□□□□□ -1.21
CLIP4-212ENST00000493551 TMPRSS13Q9BYE2 586 aa7.5□□□□□ -1.21
CLIP4-212ENST00000493551 SAP130Q9H0E3 1048 aa7.5□□□□□ -1.21
CLIP4-212ENST00000493551 DISP1Q96F81 1524 aa7.49□□□□□ -1.21
CLIP4-212ENST00000493551 LMOD1P29536 600 aaPredicted RBP7.49□□□□□ -1.21
CLIP4-212ENST00000493551 ZAP70P43403 619 aa7.49□□□□□ -1.21
CLIP4-212ENST00000493551 SPOCD1Q6ZMY3 1216 aa7.49□□□□□ -1.21
CLIP4-212ENST00000493551 ZAR1Q86SH2 424 aa7.49□□□□□ -1.21
CLIP4-212ENST00000493551 TBC1D32Q96NH3 1257 aa7.49□□□□□ -1.21
CLIP4-212ENST00000493551 BIN1O00499 593 aa7.48□□□□□ -1.21
CLIP4-212ENST00000493551 USP11P51784 963 aa7.48□□□□□ -1.21
CLIP4-212ENST00000493551 YIPF2Q9BWQ6 316 aa7.48□□□□□ -1.21
CLIP4-212ENST00000493551 UHRF1BP1LA0JNW5 1464 aa7.48□□□□□ -1.21
CLIP4-212ENST00000493551 TNFRSF10BO14763 440 aa7.47□□□□□ -1.21
CLIP4-212ENST00000493551 ADMP35318 185 aa7.47□□□□□ -1.21
CLIP4-212ENST00000493551 ZNF124Q15973 351 aa7.47□□□□□ -1.21
CLIP4-212ENST00000493551 PDE12Q6L8Q7 609 aaKnown RBP7.47□□□□□ -1.21
CLIP4-212ENST00000493551 GPR152Q8TDT2 470 aa7.47□□□□□ -1.21
CLIP4-212ENST00000493551 FBLIM1Q8WUP2 373 aa7.47□□□□□ -1.21
CLIP4-212ENST00000493551 CALR3Q96L12 384 aaKnown RBP7.47□□□□□ -1.21
CLIP4-212ENST00000493551 PRKAG2Q9UGJ0 569 aa7.47□□□□□ -1.21
CLIP4-212ENST00000493551 SOX13Q9UN79 622 aa7.47□□□□□ -1.21
CLIP4-212ENST00000493551 WDR7Q9Y4E6 1490 aa7.47□□□□□ -1.21
CLIP4-212ENST00000493551 KDM5BQ9UGL1 1544 aa7.47□□□□□ -1.21
CLIP4-212ENST00000493551 CD109Q6YHK3 1445 aa7.46□□□□□ -1.21
CLIP4-212ENST00000493551 PDE2AO00408 941 aaPredicted RBP7.46□□□□□ -1.22
CLIP4-212ENST00000493551 HSPA2P54652 639 aa7.46□□□□□ -1.22
CLIP4-212ENST00000493551 SWI5Q1ZZU3 235 aa7.46□□□□□ -1.22
CLIP4-212ENST00000493551 CDPF1Q6NVV7 123 aa7.46□□□□□ -1.22
CLIP4-212ENST00000493551 PRIMPOLQ96LW4 560 aa7.46□□□□□ -1.22
CLIP4-212ENST00000493551 ELP3Q9H9T3 547 aa7.46□□□□□ -1.22
CLIP4-212ENST00000493551 KANSL3Q9P2N6 904 aa7.46□□□□□ -1.22
CLIP4-212ENST00000493551 SALL4Q9UJQ4 1053 aa7.46□□□□□ -1.22
CLIP4-212ENST00000493551 LMTK3Q96Q04 1460 aa7.46□□□□□ -1.22
CLIP4-212ENST00000493551 ARID4BQ4LE39 1312 aaPredicted RBP7.46□□□□□ -1.22
CLIP4-212ENST00000493551 NFKBIEO00221 500 aa7.45□□□□□ -1.22
CLIP4-212ENST00000493551 FARP2O94887 1054 aaPredicted RBP7.45□□□□□ -1.22
CLIP4-212ENST00000493551 PKN1Q16512 942 aa7.45□□□□□ -1.22
CLIP4-212ENST00000493551 DUSP27Q5VZP5 1158 aa7.45□□□□□ -1.22
CLIP4-212ENST00000493551 HGSNATQ68CP4 663 aa7.45□□□□□ -1.22
CLIP4-212ENST00000493551 PROSER2Q86WR7 435 aaPredicted RBP7.45□□□□□ -1.22
CLIP4-212ENST00000493551 FNBP4Q8N3X1 1017 aaPredicted RBP7.45□□□□□ -1.22
CLIP4-212ENST00000493551 EZH1Q92800 747 aaPredicted RBP7.45□□□□□ -1.22
CLIP4-212ENST00000493551 USP26Q9BXU7 913 aa7.45□□□□□ -1.22
CLIP4-212ENST00000493551 DZANK1Q9NVP4 752 aa7.45□□□□□ -1.22
CLIP4-212ENST00000493551 TMEM63CQ9P1W3 806 aa7.45□□□□□ -1.22
CLIP4-212ENST00000493551 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.45□□□□□ -1.22
CLIP4-212ENST00000493551 KIAA0556O60303 1618 aa7.45□□□□□ -1.22
CLIP4-212ENST00000493551 LOC100289279A0A1B0GTE1 492 aa7.44□□□□□ -1.22
CLIP4-212ENST00000493551 FAM170BA6NMN3 283 aa7.44□□□□□ -1.22
CLIP4-212ENST00000493551 CYP27A1Q02318 531 aa7.44□□□□□ -1.22
CLIP4-212ENST00000493551 ZC3H7BQ9UGR2 993 aaKnown RBP7.44□□□□□ -1.22
CLIP4-212ENST00000493551 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.44□□□□□ -1.22
CLIP4-212ENST00000493551 PTPRMP28827 1452 aa7.43□□□□□ -1.22
CLIP4-212ENST00000493551 PRMT3O60678 531 aa7.43□□□□□ -1.22
CLIP4-212ENST00000493551 RAPGEF3O95398 923 aa7.43□□□□□ -1.22
CLIP4-212ENST00000493551 DRD2P14416 443 aa7.43□□□□□ -1.22
CLIP4-212ENST00000493551 ACPPP15309 386 aa7.43□□□□□ -1.22
CLIP4-212ENST00000493551 IKBKEQ14164 716 aa7.43□□□□□ -1.22
CLIP4-212ENST00000493551 OCLNQ16625 522 aa7.43□□□□□ -1.22
CLIP4-212ENST00000493551 EXOSC6Q5RKV6 272 aaKnown RBP7.43□□□□□ -1.22
CLIP4-212ENST00000493551 ZNF438Q7Z4V0 828 aa7.43□□□□□ -1.22
CLIP4-212ENST00000493551 ABTB2Q8N961 1025 aa7.43□□□□□ -1.22
CLIP4-212ENST00000493551 C2CD4AQ8NCU7 369 aaPredicted RBP7.43□□□□□ -1.22
CLIP4-212ENST00000493551 GATA6Q92908 595 aa7.43□□□□□ -1.22
CLIP4-212ENST00000493551 SLC5A6Q9Y289 635 aa7.43□□□□□ -1.22
CLIP4-212ENST00000493551 SOX1O00570 391 aaPredicted RBP7.42□□□□□ -1.22
CLIP4-212ENST00000493551 PLCL1Q15111 1095 aa7.42□□□□□ -1.22
CLIP4-212ENST00000493551 KRTAP4-5Q9BYR2 181 aa7.42□□□□□ -1.22
CLIP4-212ENST00000493551 SOX17Q9H6I2 414 aaPredicted RBP7.42□□□□□ -1.22
CLIP4-212ENST00000493551 LRRC4CQ9HCJ2 640 aa7.42□□□□□ -1.22
CLIP4-212ENST00000493551 CNTN3Q9P232 1028 aa7.42□□□□□ -1.22
CLIP4-212ENST00000493551 STIM2Q9P246 746 aa7.42□□□□□ -1.22
CLIP4-212ENST00000493551 NOVA2Q9UNW9 492 aaKnown RBP7.42□□□□□ -1.22
CLIP4-212ENST00000493551 ACIN1Q9UKV3 1341 aaKnown RBP7.42□□□□□ -1.22
CLIP4-212ENST00000493551 DISP3Q9P2K9 1392 aa7.42□□□□□ -1.22
CLIP4-212ENST00000493551 CES1P23141 567 aa7.41□□□□□ -1.22
CLIP4-212ENST00000493551 RANGAP1P46060 587 aaPredicted RBP7.41□□□□□ -1.22
CLIP4-212ENST00000493551 ZNF792Q3KQV3 632 aa7.41□□□□□ -1.22
CLIP4-212ENST00000493551 TPRNQ4KMQ1 711 aa7.41□□□□□ -1.22
CLIP4-212ENST00000493551 STK11IPQ8N1F8 1099 aa7.41□□□□□ -1.22
CLIP4-212ENST00000493551 TMEM102Q8N9M5 508 aaPredicted RBP7.41□□□□□ -1.22
CLIP4-212ENST00000493551 BSNDQ8WZ55 320 aa7.41□□□□□ -1.22
CLIP4-212ENST00000493551 UGGT2Q9NYU1 1516 aa7.41□□□□□ -1.22
CLIP4-212ENST00000493551 MADDQ8WXG6 1647 aa7.41□□□□□ -1.22
CLIP4-212ENST00000493551 TRPA1O75762 1119 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms