RNA–Protein interactions for RNA: ENST00000492386.5

SEMA4D-220, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,396 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-220ENST00000492386 NEMFO60524 1076 aa18.78■□□□□ 0.6
SEMA4D-220ENST00000492386 TNNT1P13805 278 aa18.78■□□□□ 0.6
SEMA4D-220ENST00000492386 RBM6P78332 1123 aaKnown RBP18.78■□□□□ 0.6
SEMA4D-220ENST00000492386 METTL24Q5JXM2 366 aa18.78■□□□□ 0.6
SEMA4D-220ENST00000492386 ATRNO75882 1429 aa18.78■□□□□ 0.6
SEMA4D-220ENST00000492386 SMTNL1A8MU46 457 aa18.77■□□□□ 0.6
SEMA4D-220ENST00000492386 CPLX1O14810 134 aa18.77■□□□□ 0.6
SEMA4D-220ENST00000492386 SPTLC2O15270 562 aa18.77■□□□□ 0.6
SEMA4D-220ENST00000492386 ADD2P35612 726 aa18.77■□□□□ 0.6
SEMA4D-220ENST00000492386 SF3A1Q15459 793 aaKnown RBP18.77■□□□□ 0.6
SEMA4D-220ENST00000492386 TTLL11Q8NHH1 800 aa18.77■□□□□ 0.6
SEMA4D-220ENST00000492386 TEX13AQ9BXU3 409 aaPredicted RBP18.77■□□□□ 0.6
SEMA4D-220ENST00000492386 NAT10Q9H0A0 1025 aaKnown RBP18.77■□□□□ 0.6
SEMA4D-220ENST00000492386 STRN4Q9NRL3 753 aa18.77■□□□□ 0.6
SEMA4D-220ENST00000492386 MAP3K15Q6ZN16 1313 aa18.77■□□□□ 0.6
SEMA4D-220ENST00000492386 KIF23Q02241 960 aaPredicted RBP18.77■□□□□ 0.6
SEMA4D-220ENST00000492386 GIGYF2Q6Y7W6 1299 aaKnown RBP18.77■□□□□ 0.6
SEMA4D-220ENST00000492386 NKX2-3Q8TAU0 364 aa18.77■□□□□ 0.6
SEMA4D-220ENST00000492386 ZNF512BQ96KM6 892 aaPredicted RBP18.77■□□□□ 0.6
SEMA4D-220ENST00000492386 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.77■□□□□ 0.6
SEMA4D-220ENST00000492386 GREM2Q9H772 168 aa18.77■□□□□ 0.6
SEMA4D-220ENST00000492386 KIAA1468Q9P260 1216 aa18.77■□□□□ 0.6
SEMA4D-220ENST00000492386 ANKRD36CQ5JPF3 1778 aa18.76■□□□□ 0.59
SEMA4D-220ENST00000492386 ITGA6P23229 1130 aa18.76■□□□□ 0.59
SEMA4D-220ENST00000492386 HLFQ16534 295 aa18.76■□□□□ 0.59
SEMA4D-220ENST00000492386 LDHAL6AQ6ZMR3 332 aa18.76■□□□□ 0.59
SEMA4D-220ENST00000492386 VGLL2Q8N8G2 317 aa18.76■□□□□ 0.59
SEMA4D-220ENST00000492386 PIGBQ92521 554 aa18.76■□□□□ 0.59
SEMA4D-220ENST00000492386 DENND2AQ9ULE3 1009 aa18.76■□□□□ 0.59
SEMA4D-220ENST00000492386 TPD52L1Q16890 204 aaPredicted RBP18.76■□□□□ 0.59
SEMA4D-220ENST00000492386 NLRP10Q86W26 655 aa18.76■□□□□ 0.59
SEMA4D-220ENST00000492386 FBXW7Q969H0 707 aa18.76■□□□□ 0.59
SEMA4D-220ENST00000492386 ITGB4P16144 1822 aa18.76■□□□□ 0.59
SEMA4D-220ENST00000492386 ECM29Q5VYK3 1845 aa18.75■□□□□ 0.59
SEMA4D-220ENST00000492386 CCZ1BP86790 482 aa18.75■□□□□ 0.59
SEMA4D-220ENST00000492386 CCZ1P86791 482 aaPredicted RBP18.75■□□□□ 0.59
SEMA4D-220ENST00000492386 DPCR1Q3MIW9 517 aa18.75■□□□□ 0.59
SEMA4D-220ENST00000492386 AXDND1Q5T1B0 1012 aaPredicted RBP18.75■□□□□ 0.59
SEMA4D-220ENST00000492386 ANO1Q5XXA6 986 aa18.75■□□□□ 0.59
SEMA4D-220ENST00000492386 TBC1D10CQ8IV04 446 aa18.75■□□□□ 0.59
SEMA4D-220ENST00000492386 RGS22Q8NE09 1264 aa18.75■□□□□ 0.59
SEMA4D-220ENST00000492386 CCDC69A6NI79 296 aa18.75■□□□□ 0.59
SEMA4D-220ENST00000492386 GPTP24298 496 aa18.75■□□□□ 0.59
SEMA4D-220ENST00000492386 SLC9C2Q5TAH2 1124 aa18.75■□□□□ 0.59
SEMA4D-220ENST00000492386 CYB5R4Q7L1T6 521 aa18.75■□□□□ 0.59
SEMA4D-220ENST00000492386 BPIFA3Q9BQP9 254 aa18.75■□□□□ 0.59
SEMA4D-220ENST00000492386 PIH1D3Q9NQM4 214 aaKnown RBP18.75■□□□□ 0.59
SEMA4D-220ENST00000492386 ZMYM6O95789 1325 aa18.74■□□□□ 0.59
SEMA4D-220ENST00000492386 USP27XA6NNY8 438 aa18.74■□□□□ 0.59
SEMA4D-220ENST00000492386 STARD3NLO95772 234 aa18.74■□□□□ 0.59
SEMA4D-220ENST00000492386 SKILP12757 684 aa18.74■□□□□ 0.59
SEMA4D-220ENST00000492386 CTSWP56202 376 aa18.74■□□□□ 0.59
SEMA4D-220ENST00000492386 SYNE3Q6ZMZ3 975 aa18.74■□□□□ 0.59
SEMA4D-220ENST00000492386 FILIP1Q7Z7B0 1213 aa18.74■□□□□ 0.59
SEMA4D-220ENST00000492386 NBPF11Q86T75 865 aa18.74■□□□□ 0.59
SEMA4D-220ENST00000492386 ANGEL1Q9UNK9 670 aaKnown RBP18.74■□□□□ 0.59
SEMA4D-220ENST00000492386 PAXBP1Q9Y5B6 917 aa18.74■□□□□ 0.59
SEMA4D-220ENST00000492386 LRP6O75581 1613 aa18.73■□□□□ 0.59
SEMA4D-220ENST00000492386 ANKRD18BA2A2Z9 1011 aa18.73■□□□□ 0.59
SEMA4D-220ENST00000492386 ZNF202O95125 648 aa18.73■□□□□ 0.59
SEMA4D-220ENST00000492386 TTF1Q15361 905 aaPredicted RBP18.73■□□□□ 0.59
SEMA4D-220ENST00000492386 PPP4R3BQ5MIZ7 849 aa18.73■□□□□ 0.59
SEMA4D-220ENST00000492386 PDCL2Q8N4E4 241 aa18.73■□□□□ 0.59
SEMA4D-220ENST00000492386 MROH7-TTC4A0A0A0MT08 1334 aa18.73■□□□□ 0.59
SEMA4D-220ENST00000492386 SH2B2O14492 632 aaPredicted RBP18.73■□□□□ 0.59
SEMA4D-220ENST00000492386 CMA1P23946 247 aa18.73■□□□□ 0.59
SEMA4D-220ENST00000492386 EVA1CP58658 441 aa18.73■□□□□ 0.59
SEMA4D-220ENST00000492386 TRDNQ13061 729 aa18.73■□□□□ 0.59
SEMA4D-220ENST00000492386 UBE3CQ15386 1083 aa18.73■□□□□ 0.59
SEMA4D-220ENST00000492386 AIFM3Q96NN9 605 aa18.73■□□□□ 0.59
SEMA4D-220ENST00000492386 CNNM1Q9NRU3 951 aa18.73■□□□□ 0.59
SEMA4D-220ENST00000492386 WDHD1O75717 1129 aaPredicted RBP18.72■□□□□ 0.59
SEMA4D-220ENST00000492386 PFKFB1P16118 471 aa18.72■□□□□ 0.59
SEMA4D-220ENST00000492386 NCBP1Q09161 790 aaKnown RBP18.72■□□□□ 0.59
SEMA4D-220ENST00000492386 SLC39A14Q15043 492 aa18.72■□□□□ 0.59
SEMA4D-220ENST00000492386 NYAP1Q6ZVC0 841 aa18.72■□□□□ 0.59
SEMA4D-220ENST00000492386 NUP98P52948 1817 aa18.72■□□□□ 0.59
SEMA4D-220ENST00000492386 SLC3A2P08195 630 aaKnown RBP18.71■□□□□ 0.59
SEMA4D-220ENST00000492386 SYCP1Q15431 976 aa18.71■□□□□ 0.59
SEMA4D-220ENST00000492386 CEP135Q66GS9 1140 aa18.71■□□□□ 0.59
SEMA4D-220ENST00000492386 OSBPL5Q9H0X9 879 aaPredicted RBP18.71■□□□□ 0.59
SEMA4D-220ENST00000492386 ZNF532Q9HCE3 1301 aa18.71■□□□□ 0.59
SEMA4D-220ENST00000492386 IDH1O75874 414 aaKnown RBP18.71■□□□□ 0.59
SEMA4D-220ENST00000492386 PDE8BO95263 885 aa18.71■□□□□ 0.59
SEMA4D-220ENST00000492386 METAP2P50579 478 aaKnown RBP eCLIP18.71■□□□□ 0.59
SEMA4D-220ENST00000492386 NLRP12P59046 1061 aa18.71■□□□□ 0.59
SEMA4D-220ENST00000492386 ALG1Q9BT22 464 aa18.71■□□□□ 0.59
SEMA4D-220ENST00000492386 SENP2Q9HC62 589 aa18.71■□□□□ 0.59
SEMA4D-220ENST00000492386 ARAP2Q8WZ64 1704 aa18.71■□□□□ 0.58
SEMA4D-220ENST00000492386 TCRBV5S4A2TA0A5A2 114 aa18.7■□□□□ 0.58
SEMA4D-220ENST00000492386 IRS4O14654 1257 aaPredicted RBP18.7■□□□□ 0.58
SEMA4D-220ENST00000492386 PDE6AP16499 860 aa18.7■□□□□ 0.58
SEMA4D-220ENST00000492386 ARID4AP29374 1257 aaPredicted RBP18.7■□□□□ 0.58
SEMA4D-220ENST00000492386 PHKA1P46020 1223 aa18.7■□□□□ 0.58
SEMA4D-220ENST00000492386 CCDC102BQ68D86 513 aa18.7■□□□□ 0.58
SEMA4D-220ENST00000492386 APOA5Q6Q788 366 aa18.7■□□□□ 0.58
SEMA4D-220ENST00000492386 SMAP1Q8IYB5 467 aaPredicted RBP18.7■□□□□ 0.58
SEMA4D-220ENST00000492386 KCND1Q9NSA2 647 aa18.7■□□□□ 0.58
SEMA4D-220ENST00000492386 SLAIN2Q9P270 581 aa18.7■□□□□ 0.58
SEMA4D-220ENST00000492386 BIN1O00499 593 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms