RNA–Protein interactions for RNA: ENST00000492233.5

ATPAF1-206, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 3

Gene ATPAF1, Length 429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-206ENST00000492233 TIMM44O43615 452 aa4.5□□□□□ -1.69
ATPAF1-206ENST00000492233 PRPF40AO75400 957 aaKnown RBP4.5□□□□□ -1.69
ATPAF1-206ENST00000492233 REC8O95072 547 aa4.5□□□□□ -1.69
ATPAF1-206ENST00000492233 CD2BP2O95400 341 aaKnown RBP4.5□□□□□ -1.69
ATPAF1-206ENST00000492233 CYP2E1P05181 493 aaPredicted RBP4.5□□□□□ -1.69
ATPAF1-206ENST00000492233 LDHCP07864 332 aa4.5□□□□□ -1.69
ATPAF1-206ENST00000492233 FGRP09769 529 aa4.5□□□□□ -1.69
ATPAF1-206ENST00000492233 PDE1AP54750 535 aa4.5□□□□□ -1.69
ATPAF1-206ENST00000492233 EIF4A1P60842 406 aaKnown RBP4.5□□□□□ -1.69
ATPAF1-206ENST00000492233 DAB2P98082 770 aa4.5□□□□□ -1.69
ATPAF1-206ENST00000492233 PLCB3Q01970 1234 aa4.5□□□□□ -1.69
ATPAF1-206ENST00000492233 FKBP5Q13451 457 aaPredicted RBP4.5□□□□□ -1.69
ATPAF1-206ENST00000492233 AMOTQ4VCS5 1084 aa4.5□□□□□ -1.69
ATPAF1-206ENST00000492233 ZNF394Q53GI3 561 aa4.5□□□□□ -1.69
ATPAF1-206ENST00000492233 AKAP4Q5JQC9 854 aa4.5□□□□□ -1.69
ATPAF1-206ENST00000492233 NBPF6Q5VWK0 638 aa4.5□□□□□ -1.69
ATPAF1-206ENST00000492233 NUTM2GQ5VZR2 741 aa4.5□□□□□ -1.69
ATPAF1-206ENST00000492233 ARMCX6Q7L4S7 300 aa4.5□□□□□ -1.69
ATPAF1-206ENST00000492233 TMC7Q7Z402 723 aa4.5□□□□□ -1.69
ATPAF1-206ENST00000492233 ARHGEF25Q86VW2 580 aa4.5□□□□□ -1.69
ATPAF1-206ENST00000492233 DRC7Q8IY82 874 aa4.5□□□□□ -1.69
ATPAF1-206ENST00000492233 SSH3Q8TE77 659 aa4.5□□□□□ -1.69
ATPAF1-206ENST00000492233 TNPO1Q92973 898 aaKnown RBP4.5□□□□□ -1.69
ATPAF1-206ENST00000492233 ZNF622Q969S3 477 aaKnown RBP eCLIP4.5□□□□□ -1.69
ATPAF1-206ENST00000492233 NBPF4Q96M43 638 aa4.5□□□□□ -1.69
ATPAF1-206ENST00000492233 GBP4Q96PP9 640 aa4.5□□□□□ -1.69
ATPAF1-206ENST00000492233 SRCIN1Q9C0H9 1055 aa4.5□□□□□ -1.69
ATPAF1-206ENST00000492233 RSPH9Q9H1X1 276 aaPredicted RBP4.5□□□□□ -1.69
ATPAF1-206ENST00000492233 NEUROD4Q9HD90 331 aa4.5□□□□□ -1.69
ATPAF1-206ENST00000492233 FANCLQ9NW38 375 aa4.5□□□□□ -1.69
ATPAF1-206ENST00000492233 KLF15Q9UIH9 416 aa4.5□□□□□ -1.69
ATPAF1-206ENST00000492233 DDX41Q9UJV9 622 aaKnown RBP4.5□□□□□ -1.69
ATPAF1-206ENST00000492233 PCDHGB7Q9Y5F8 929 aa4.5□□□□□ -1.69
ATPAF1-206ENST00000492233 DNMT3AQ9Y6K1 912 aaPredicted RBP4.5□□□□□ -1.69
ATPAF1-206ENST00000492233 ZNF142P52746 1687 aaPredicted RBP4.5□□□□□ -1.69
ATPAF1-206ENST00000492233 PNMA6EA0A0J9YXQ4 647 aa4.49□□□□□ -1.69
ATPAF1-206ENST00000492233 GOLGA6CA6NDK9 693 aa4.49□□□□□ -1.69
ATPAF1-206ENST00000492233 GOLGA6BA6NDN3 693 aa4.49□□□□□ -1.69
ATPAF1-206ENST00000492233 GOLIM4O00461 696 aa4.49□□□□□ -1.69
ATPAF1-206ENST00000492233 TBX3O15119 743 aa4.49□□□□□ -1.69
ATPAF1-206ENST00000492233 MAP3K13O43283 966 aa4.49□□□□□ -1.69
ATPAF1-206ENST00000492233 NR1I2O75469 434 aa4.49□□□□□ -1.69
ATPAF1-206ENST00000492233 MYL1P05976 194 aa4.49□□□□□ -1.69
ATPAF1-206ENST00000492233 GOLGA6DP0CG33 693 aa4.49□□□□□ -1.69
ATPAF1-206ENST00000492233 VDRP11473 427 aa4.49□□□□□ -1.69
ATPAF1-206ENST00000492233 COL6A1P12109 1028 aa4.49□□□□□ -1.69
ATPAF1-206ENST00000492233 CD46P15529 392 aa4.49□□□□□ -1.69
ATPAF1-206ENST00000492233 RACK1P63244 317 aaKnown RBP4.49□□□□□ -1.69
ATPAF1-206ENST00000492233 SF3B2Q13435 895 aaKnown RBP4.49□□□□□ -1.69
ATPAF1-206ENST00000492233 SERINC3Q13530 473 aa4.49□□□□□ -1.69
ATPAF1-206ENST00000492233 MTMR3Q13615 1198 aa4.49□□□□□ -1.69
ATPAF1-206ENST00000492233 KCTD2Q14681 263 aa4.49□□□□□ -1.69
ATPAF1-206ENST00000492233 CCDC96Q2M329 555 aa4.49□□□□□ -1.69
ATPAF1-206ENST00000492233 SKOR2Q2VWA4 1001 aaPredicted RBP4.49□□□□□ -1.69
ATPAF1-206ENST00000492233 PLEKHO1Q53GL0 409 aaPredicted RBP4.49□□□□□ -1.69
ATPAF1-206ENST00000492233 C10orf62Q5T681 223 aaPredicted RBP4.49□□□□□ -1.69
ATPAF1-206ENST00000492233 RNF135Q8IUD6 432 aa4.49□□□□□ -1.69
ATPAF1-206ENST00000492233 KIF12Q96FN5 646 aa4.49□□□□□ -1.69
ATPAF1-206ENST00000492233 LTV1Q96GA3 475 aaPredicted RBP4.49□□□□□ -1.69
ATPAF1-206ENST00000492233 SLC39A13Q96H72 371 aa4.49□□□□□ -1.69
ATPAF1-206ENST00000492233 ESYT1Q9BSJ8 1104 aa4.49□□□□□ -1.69
ATPAF1-206ENST00000492233 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.49□□□□□ -1.69
ATPAF1-206ENST00000492233 LRRCC1Q9C099 1032 aa4.49□□□□□ -1.69
ATPAF1-206ENST00000492233 USP44Q9H0E7 712 aa4.49□□□□□ -1.69
ATPAF1-206ENST00000492233 C12orf49Q9H741 205 aa4.49□□□□□ -1.69
ATPAF1-206ENST00000492233 ARNT2Q9HBZ2 717 aa4.49□□□□□ -1.69
ATPAF1-206ENST00000492233 GOLGA6AQ9NYA3 693 aa4.49□□□□□ -1.69
ATPAF1-206ENST00000492233 CXXC1Q9P0U4 656 aaPredicted RBP4.49□□□□□ -1.69
ATPAF1-206ENST00000492233 INTUQ9ULD6 942 aa4.49□□□□□ -1.69
ATPAF1-206ENST00000492233 RGPD8O14715 1765 aaPredicted RBP4.49□□□□□ -1.69
ATPAF1-206ENST00000492233 HEG1Q9ULI3 1381 aa4.49□□□□□ -1.69
ATPAF1-206ENST00000492233 CHD2O14647 1828 aaKnown RBP4.49□□□□□ -1.69
ATPAF1-206ENST00000492233 FAM208AQ9UK61 1670 aaKnown RBP4.48□□□□□ -1.69
ATPAF1-206ENST00000492233 DYTNA2CJ06 578 aa4.48□□□□□ -1.69
ATPAF1-206ENST00000492233 GOLGA6L3A6NEY3 463 aa4.48□□□□□ -1.69
ATPAF1-206ENST00000492233 CLGNO14967 610 aa4.48□□□□□ -1.69
ATPAF1-206ENST00000492233 RNMTO43148 476 aaKnown RBP4.48□□□□□ -1.69
ATPAF1-206ENST00000492233 ST18O60284 1047 aa4.48□□□□□ -1.69
ATPAF1-206ENST00000492233 EVI5O60447 810 aa4.48□□□□□ -1.69
ATPAF1-206ENST00000492233 GCP02774 474 aa4.48□□□□□ -1.69
ATPAF1-206ENST00000492233 UBTFL1P0CB47 393 aaPredicted RBP4.48□□□□□ -1.69
ATPAF1-206ENST00000492233 HCLS1P14317 486 aaPredicted RBP4.48□□□□□ -1.69
ATPAF1-206ENST00000492233 ATF4P18848 351 aaPredicted RBP4.48□□□□□ -1.69
ATPAF1-206ENST00000492233 MX1P20591 662 aa4.48□□□□□ -1.69
ATPAF1-206ENST00000492233 CHMLP26374 656 aa4.48□□□□□ -1.69
ATPAF1-206ENST00000492233 CDC27P30260 824 aa4.48□□□□□ -1.69
ATPAF1-206ENST00000492233 TRAPPC10P48553 1259 aa4.48□□□□□ -1.69
ATPAF1-206ENST00000492233 MASP1P48740 699 aa4.48□□□□□ -1.69
ATPAF1-206ENST00000492233 MCM2P49736 904 aa4.48□□□□□ -1.69
ATPAF1-206ENST00000492233 MRE11P49959 708 aa4.48□□□□□ -1.69
ATPAF1-206ENST00000492233 NUCB2P80303 420 aa4.48□□□□□ -1.69
ATPAF1-206ENST00000492233 FMR1Q06787 632 aaKnown RBP eCLIP4.48□□□□□ -1.69
ATPAF1-206ENST00000492233 MTX1Q13505 466 aa4.48□□□□□ -1.69
ATPAF1-206ENST00000492233 NCOA4Q13772 614 aa4.48□□□□□ -1.69
ATPAF1-206ENST00000492233 RAPGEF1Q13905 1077 aa4.48□□□□□ -1.69
ATPAF1-206ENST00000492233 ARSHQ5FYA8 562 aa4.48□□□□□ -1.69
ATPAF1-206ENST00000492233 BEND3Q5T5X7 828 aa4.48□□□□□ -1.69
ATPAF1-206ENST00000492233 ZNF530Q6P9A1 599 aaPredicted RBP4.48□□□□□ -1.69
ATPAF1-206ENST00000492233 NBPF11Q86T75 865 aa4.48□□□□□ -1.69
ATPAF1-206ENST00000492233 USP48Q86UV5 1035 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms