RNA–Protein interactions for RNA: ENST00000491916.1

SS18L1-204, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18L1, Length 456 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-204ENST00000491916 SERPINA10Q9UK55 444 aa18.69■□□□□ 0.58
SS18L1-204ENST00000491916 PITPNM2Q9BZ72 1349 aa18.69■□□□□ 0.58
SS18L1-204ENST00000491916 TRPM7Q96QT4 1865 aa18.69■□□□□ 0.58
SS18L1-204ENST00000491916 DLGAP5Q15398 846 aa18.68■□□□□ 0.58
SS18L1-204ENST00000491916 KRT26Q7Z3Y9 468 aa18.68■□□□□ 0.58
SS18L1-204ENST00000491916 ZNF512BQ96KM6 892 aaPredicted RBP18.68■□□□□ 0.58
SS18L1-204ENST00000491916 ECM29Q5VYK3 1845 aa18.67■□□□□ 0.58
SS18L1-204ENST00000491916 APBB1O00213 710 aa18.67■□□□□ 0.58
SS18L1-204ENST00000491916 CRKP46108 304 aa18.67■□□□□ 0.58
SS18L1-204ENST00000491916 HDLBPQ00341 1268 aaKnown RBP18.67■□□□□ 0.58
SS18L1-204ENST00000491916 AACSQ86V21 672 aa18.67■□□□□ 0.58
SS18L1-204ENST00000491916 SPATA5Q8NB90 893 aa18.67■□□□□ 0.58
SS18L1-204ENST00000491916 ZNF384Q8TF68 577 aa18.67■□□□□ 0.58
SS18L1-204ENST00000491916 DCPSQ96C86 337 aaKnown RBP18.67■□□□□ 0.58
SS18L1-204ENST00000491916 UQCRFS1P1P0C7P4 283 aa18.66■□□□□ 0.58
SS18L1-204ENST00000491916 GORABQ5T7V8 394 aa18.66■□□□□ 0.58
SS18L1-204ENST00000491916 APOBEC3HQ6NTF7 200 aaKnown RBP18.66■□□□□ 0.58
SS18L1-204ENST00000491916 CREBZFQ9NS37 354 aa18.66■□□□□ 0.58
SS18L1-204ENST00000491916 SMARCA5O60264 1052 aaPredicted RBP18.65■□□□□ 0.58
SS18L1-204ENST00000491916 ZDHHC15Q96MV8 337 aa18.65■□□□□ 0.58
SS18L1-204ENST00000491916 TMEM88BA6NKF7 163 aa18.64■□□□□ 0.57
SS18L1-204ENST00000491916 DIXDC1Q155Q3 683 aa18.64■□□□□ 0.57
SS18L1-204ENST00000491916 CCDC158Q5M9N0 1113 aa18.64■□□□□ 0.57
SS18L1-204ENST00000491916 HHIPL2Q6UWX4 724 aa18.64■□□□□ 0.57
SS18L1-204ENST00000491916 TBC1D9Q6ZT07 1266 aa18.64■□□□□ 0.57
SS18L1-204ENST00000491916 SNRKQ9NRH2 765 aa18.64■□□□□ 0.57
SS18L1-204ENST00000491916 MYO5AQ9Y4I1 1855 aaKnown RBP18.63■□□□□ 0.57
SS18L1-204ENST00000491916 CLRN2A0PK11 232 aa18.63■□□□□ 0.57
SS18L1-204ENST00000491916 CYP2E1P05181 493 aaPredicted RBP18.63■□□□□ 0.57
SS18L1-204ENST00000491916 LDHBP07195 334 aaKnown RBP18.63■□□□□ 0.57
SS18L1-204ENST00000491916 HDAC1Q13547 482 aaPredicted RBP18.63■□□□□ 0.57
SS18L1-204ENST00000491916 AAMPQ13685 434 aa18.63■□□□□ 0.57
SS18L1-204ENST00000491916 SPDYE2Q495Y8 402 aa18.63■□□□□ 0.57
SS18L1-204ENST00000491916 TTC39AQ5SRH9 613 aa18.63■□□□□ 0.57
SS18L1-204ENST00000491916 SULF1Q8IWU6 871 aa18.63■□□□□ 0.57
SS18L1-204ENST00000491916 CLASRPQ8N2M8 674 aaKnown RBP18.63■□□□□ 0.57
SS18L1-204ENST00000491916 TEKT1Q969V4 418 aa18.63■□□□□ 0.57
SS18L1-204ENST00000491916 CDCA5Q96FF9 252 aa18.63■□□□□ 0.57
SS18L1-204ENST00000491916 LRRCC1Q9C099 1032 aa18.63■□□□□ 0.57
SS18L1-204ENST00000491916 TDRD3Q9H7E2 651 aaKnown RBP18.63■□□□□ 0.57
SS18L1-204ENST00000491916 ZNF70Q9UC06 446 aaPredicted RBP18.63■□□□□ 0.57
SS18L1-204ENST00000491916 DAGLAQ9Y4D2 1042 aa18.63■□□□□ 0.57
SS18L1-204ENST00000491916 CELF2O95319 508 aaKnown RBP18.62■□□□□ 0.57
SS18L1-204ENST00000491916 ZAP70P43403 619 aa18.62■□□□□ 0.57
SS18L1-204ENST00000491916 RBM5P52756 815 aaKnown RBP eCLIP18.62■□□□□ 0.57
SS18L1-204ENST00000491916 PRAMEF18Q5VWM3 479 aa18.62■□□□□ 0.57
SS18L1-204ENST00000491916 FAM163AQ96GL9 167 aaPredicted RBP18.62■□□□□ 0.57
SS18L1-204ENST00000491916 MAST3O60307 1309 aa18.62■□□□□ 0.57
SS18L1-204ENST00000491916 MYH2Q9UKX2 1941 aa18.61■□□□□ 0.57
SS18L1-204ENST00000491916 GAKO14976 1311 aa18.61■□□□□ 0.57
SS18L1-204ENST00000491916 IRX6P78412 446 aaPredicted RBP18.61■□□□□ 0.57
SS18L1-204ENST00000491916 ZGPATQ8N5A5 531 aaKnown RBP18.61■□□□□ 0.57
SS18L1-204ENST00000491916 PIH1D3Q9NQM4 214 aaKnown RBP18.61■□□□□ 0.57
SS18L1-204ENST00000491916 ABCF2Q9UG63 623 aa18.61■□□□□ 0.57
SS18L1-204ENST00000491916 NDUFB9Q9Y6M9 179 aa18.61■□□□□ 0.57
SS18L1-204ENST00000491916 MECOMQ03112 1051 aa18.6■□□□□ 0.57
SS18L1-204ENST00000491916 APOBEC3FQ8IUX4 373 aaKnown RBP18.6■□□□□ 0.57
SS18L1-204ENST00000491916 NSUN4Q96CB9 384 aaKnown RBP18.6■□□□□ 0.57
SS18L1-204ENST00000491916 IGHDP01880 384 aa18.59■□□□□ 0.57
SS18L1-204ENST00000491916 IFIT2P09913 472 aaKnown RBP18.59■□□□□ 0.57
SS18L1-204ENST00000491916 ERICH6Q7L0X2 663 aa18.59■□□□□ 0.57
SS18L1-204ENST00000491916 SAPCD2Q86UD0 394 aa18.59■□□□□ 0.57
SS18L1-204ENST00000491916 DEFB129Q9H1M3 183 aa18.59■□□□□ 0.57
SS18L1-204ENST00000491916 ANTXR1Q9H6X2 564 aa18.59■□□□□ 0.57
SS18L1-204ENST00000491916 TLL2Q9Y6L7 1015 aa18.59■□□□□ 0.57
SS18L1-204ENST00000491916 CNTNAP1P78357 1384 aa18.58■□□□□ 0.57
SS18L1-204ENST00000491916 RASSF10A6NK89 507 aa18.58■□□□□ 0.56
SS18L1-204ENST00000491916 MYO1BO43795 1136 aa18.58■□□□□ 0.56
SS18L1-204ENST00000491916 CACNB3P54284 484 aa18.58■□□□□ 0.56
SS18L1-204ENST00000491916 SPTY2D1Q68D10 685 aaPredicted RBP18.58■□□□□ 0.56
SS18L1-204ENST00000491916 CDC42EP5Q6NZY7 148 aa18.58■□□□□ 0.56
SS18L1-204ENST00000491916 CDAN1Q8IWY9 1227 aa18.58■□□□□ 0.56
SS18L1-204ENST00000491916 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.58■□□□□ 0.56
SS18L1-204ENST00000491916 TEPSINQ96N21 525 aa18.58■□□□□ 0.56
SS18L1-204ENST00000491916 ZNF408Q9H9D4 720 aa18.58■□□□□ 0.56
SS18L1-204ENST00000491916 SSC5DA1L4H1 1573 aa18.58■□□□□ 0.56
SS18L1-204ENST00000491916 RASA3Q14644 834 aa18.57■□□□□ 0.56
SS18L1-204ENST00000491916 KLRG1Q96E93 195 aa18.57■□□□□ 0.56
SS18L1-204ENST00000491916 VEZTQ9HBM0 779 aa18.57■□□□□ 0.56
SS18L1-204ENST00000491916 DOCK2Q92608 1830 aa18.56■□□□□ 0.56
SS18L1-204ENST00000491916 ATP5JP18859 108 aa18.56■□□□□ 0.56
SS18L1-204ENST00000491916 DZIP1Q86YF9 867 aaKnown RBP18.56■□□□□ 0.56
SS18L1-204ENST00000491916 GBA2Q9HCG7 927 aaPredicted RBP18.56■□□□□ 0.56
SS18L1-204ENST00000491916 PPP2R3BQ9Y5P8 575 aa18.56■□□□□ 0.56
SS18L1-204ENST00000491916 RFX7Q2KHR2 1363 aa18.55■□□□□ 0.56
SS18L1-204ENST00000491916 MROH7-TTC4A0A0A0MT08 1334 aa18.55■□□□□ 0.56
SS18L1-204ENST00000491916 SALL3Q9BXA9 1300 aa18.55■□□□□ 0.56
SS18L1-204ENST00000491916 GPR75-ASB3A0A0A6YYF3 556 aa18.55■□□□□ 0.56
SS18L1-204ENST00000491916 TCP10L2B9ZVM9 353 aa18.55■□□□□ 0.56
SS18L1-204ENST00000491916 RHBDL3P58872 404 aa18.55■□□□□ 0.56
SS18L1-204ENST00000491916 FKBP1CQ5VVH2 108 aa18.55■□□□□ 0.56
SS18L1-204ENST00000491916 MOB2Q70IA6 237 aa18.55■□□□□ 0.56
SS18L1-204ENST00000491916 ADGRA1Q86SQ6 560 aa18.55■□□□□ 0.56
SS18L1-204ENST00000491916 SMC5Q8IY18 1101 aa18.55■□□□□ 0.56
SS18L1-204ENST00000491916 OTUD7AQ8TE49 926 aaPredicted RBP18.55■□□□□ 0.56
SS18L1-204ENST00000491916 EDC3Q96F86 508 aaKnown RBP18.55■□□□□ 0.56
SS18L1-204ENST00000491916 BCL11AQ9H165 835 aa18.55■□□□□ 0.56
SS18L1-204ENST00000491916 MKRN1Q9UHC7 482 aaKnown RBP18.55■□□□□ 0.56
SS18L1-204ENST00000491916 NFIAQ12857 509 aa18.54■□□□□ 0.56
SS18L1-204ENST00000491916 NBPF12Q5TAG4 269 aaPredicted RBP18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms