RNA–Protein interactions for RNA: ENST00000491915.1

COL6A4P1-203, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 5

Gene COL6A4P1, Length 1,251 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-203ENST00000491915 APOBEC3FQ8IUX4 373 aaKnown RBP11.09□□□□□ -0.63
COL6A4P1-203ENST00000491915 VEZTQ9HBM0 779 aa11.09□□□□□ -0.63
COL6A4P1-203ENST00000491915 SERPINA10Q9UK55 444 aa11.09□□□□□ -0.63
COL6A4P1-203ENST00000491915 USP2O75604 605 aaPredicted RBP11.08□□□□□ -0.64
COL6A4P1-203ENST00000491915 ATP8B2P98198 1209 aa11.08□□□□□ -0.64
COL6A4P1-203ENST00000491915 ATP2B3Q16720 1220 aa11.08□□□□□ -0.64
COL6A4P1-203ENST00000491915 SPDYE2Q495Y8 402 aa11.08□□□□□ -0.64
COL6A4P1-203ENST00000491915 APOBEC3HQ6NTF7 200 aaKnown RBP11.08□□□□□ -0.64
COL6A4P1-203ENST00000491915 CDAN1Q8IWY9 1227 aa11.08□□□□□ -0.64
COL6A4P1-203ENST00000491915 MRIQ9BWK5 157 aa11.08□□□□□ -0.64
COL6A4P1-203ENST00000491915 HDLBPQ00341 1268 aaKnown RBP11.07□□□□□ -0.64
COL6A4P1-203ENST00000491915 PANK1Q8TE04 598 aa11.07□□□□□ -0.64
COL6A4P1-203ENST00000491915 TBC1D22AQ8WUA7 517 aa11.07□□□□□ -0.64
COL6A4P1-203ENST00000491915 TEPSINQ96N21 525 aa11.07□□□□□ -0.64
COL6A4P1-203ENST00000491915 BEGAINQ9BUH8 593 aa11.07□□□□□ -0.64
COL6A4P1-203ENST00000491915 C1orf115Q9H7X2 142 aa11.07□□□□□ -0.64
COL6A4P1-203ENST00000491915 RNF186Q9NXI6 227 aa11.07□□□□□ -0.64
COL6A4P1-203ENST00000491915 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.07□□□□□ -0.64
COL6A4P1-203ENST00000491915 ANGEL1Q9UNK9 670 aaKnown RBP11.07□□□□□ -0.64
COL6A4P1-203ENST00000491915 TCP10L2B9ZVM9 353 aa11.06□□□□□ -0.64
COL6A4P1-203ENST00000491915 MYO1BO43795 1136 aa11.06□□□□□ -0.64
COL6A4P1-203ENST00000491915 CACNB3P54284 484 aa11.06□□□□□ -0.64
COL6A4P1-203ENST00000491915 MKRN3Q13064 507 aaKnown RBP11.06□□□□□ -0.64
COL6A4P1-203ENST00000491915 POLA2Q14181 598 aa11.06□□□□□ -0.64
COL6A4P1-203ENST00000491915 CCDC102BQ68D86 513 aa11.06□□□□□ -0.64
COL6A4P1-203ENST00000491915 ARMC9Q7Z3E5 817 aa11.06□□□□□ -0.64
COL6A4P1-203ENST00000491915 WDR66Q8TBY9 1149 aa11.06□□□□□ -0.64
COL6A4P1-203ENST00000491915 XAGE2Q96GT9 111 aa11.06□□□□□ -0.64
COL6A4P1-203ENST00000491915 CLMNQ96JQ2 1002 aa11.06□□□□□ -0.64
COL6A4P1-203ENST00000491915 A0A1B0GUL7 405 aa11.05□□□□□ -0.64
COL6A4P1-203ENST00000491915 TRPA1O75762 1119 aa11.05□□□□□ -0.64
COL6A4P1-203ENST00000491915 CAPN15O75808 1086 aa11.05□□□□□ -0.64
COL6A4P1-203ENST00000491915 NF2P35240 595 aa11.05□□□□□ -0.64
COL6A4P1-203ENST00000491915 G3BP1Q13283 466 aaKnown RBP eCLIP11.05□□□□□ -0.64
COL6A4P1-203ENST00000491915 DIXDC1Q155Q3 683 aa11.05□□□□□ -0.64
COL6A4P1-203ENST00000491915 MAP3K11Q16584 847 aa11.05□□□□□ -0.64
COL6A4P1-203ENST00000491915 SUPT20HL1Q3ZLR7 823 aa11.05□□□□□ -0.64
COL6A4P1-203ENST00000491915 HHIPL2Q6UWX4 724 aa11.05□□□□□ -0.64
COL6A4P1-203ENST00000491915 SSH3Q8TE77 659 aa11.05□□□□□ -0.64
COL6A4P1-203ENST00000491915 TEKT1Q969V4 418 aa11.05□□□□□ -0.64
COL6A4P1-203ENST00000491915 ZDHHC15Q96MV8 337 aa11.05□□□□□ -0.64
COL6A4P1-203ENST00000491915 NEUROD6Q96NK8 337 aa11.05□□□□□ -0.64
COL6A4P1-203ENST00000491915 TMEM39BQ9GZU3 492 aa11.05□□□□□ -0.64
COL6A4P1-203ENST00000491915 SUGT1Q9Y2Z0 365 aa11.05□□□□□ -0.64
COL6A4P1-203ENST00000491915 COL1A1P02452 1464 aaPredicted RBP11.05□□□□□ -0.64
COL6A4P1-203ENST00000491915 CASP8AP2Q9UKL3 1982 aa11.05□□□□□ -0.64
COL6A4P1-203ENST00000491915 PRDX5P30044 214 aa11.04□□□□□ -0.64
COL6A4P1-203ENST00000491915 ITPRIPQ8IWB1 547 aa11.04□□□□□ -0.64
COL6A4P1-203ENST00000491915 SLC10A4Q96EP9 437 aa11.04□□□□□ -0.64
COL6A4P1-203ENST00000491915 GNL3LQ9NVN8 582 aaKnown RBP11.04□□□□□ -0.64
COL6A4P1-203ENST00000491915 DENND2AQ9ULE3 1009 aa11.04□□□□□ -0.64
COL6A4P1-203ENST00000491915 PPP2R3BQ9Y5P8 575 aa11.04□□□□□ -0.64
COL6A4P1-203ENST00000491915 SSC5DA1L4H1 1573 aa11.03□□□□□ -0.64
COL6A4P1-203ENST00000491915 THSD7BQ9C0I4 1608 aa11.03□□□□□ -0.64
COL6A4P1-203ENST00000491915 ZBTB22O15209 634 aa11.03□□□□□ -0.64
COL6A4P1-203ENST00000491915 CA12O43570 354 aa11.03□□□□□ -0.64
COL6A4P1-203ENST00000491915 GJA5P36382 358 aa11.03□□□□□ -0.64
COL6A4P1-203ENST00000491915 TM4SF4P48230 202 aa11.03□□□□□ -0.64
COL6A4P1-203ENST00000491915 RASGRF1Q13972 1273 aa11.03□□□□□ -0.64
COL6A4P1-203ENST00000491915 SPRYD7Q5W111 196 aa11.03□□□□□ -0.64
COL6A4P1-203ENST00000491915 CDC42EP5Q6NZY7 148 aa11.03□□□□□ -0.64
COL6A4P1-203ENST00000491915 ZFPM1Q8IX07 1006 aa11.03□□□□□ -0.64
COL6A4P1-203ENST00000491915 FTSJ3Q8IY81 847 aaKnown RBP11.03□□□□□ -0.64
COL6A4P1-203ENST00000491915 R3HDMLQ9H3Y0 253 aa11.03□□□□□ -0.64
COL6A4P1-203ENST00000491915 AKAP2Q9Y2D5 859 aa11.03□□□□□ -0.64
COL6A4P1-203ENST00000491915 DAGLAQ9Y4D2 1042 aa11.03□□□□□ -0.64
COL6A4P1-203ENST00000491915 PAPPA2Q9BXP8 1791 aa11.03□□□□□ -0.64
COL6A4P1-203ENST00000491915 PPP1R12BO60237 982 aaPredicted RBP11.02□□□□□ -0.65
COL6A4P1-203ENST00000491915 SURF6O75683 361 aaKnown RBP11.02□□□□□ -0.65
COL6A4P1-203ENST00000491915 PI16Q6UXB8 463 aa11.02□□□□□ -0.65
COL6A4P1-203ENST00000491915 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.02□□□□□ -0.65
COL6A4P1-203ENST00000491915 TBC1D9Q6ZT07 1266 aa11.02□□□□□ -0.65
COL6A4P1-203ENST00000491915 HMG20BQ9P0W2 317 aa11.02□□□□□ -0.65
COL6A4P1-203ENST00000491915 NOP58Q9Y2X3 529 aaKnown RBP11.02□□□□□ -0.65
COL6A4P1-203ENST00000491915 SEMA3EO15041 775 aa11.01□□□□□ -0.65
COL6A4P1-203ENST00000491915 TBC1D8O95759 1140 aa11.01□□□□□ -0.65
COL6A4P1-203ENST00000491915 LDHBP07195 334 aaKnown RBP11.01□□□□□ -0.65
COL6A4P1-203ENST00000491915 NFIAQ12857 509 aa11.01□□□□□ -0.65
COL6A4P1-203ENST00000491915 REM2Q8IYK8 340 aaPredicted RBP11.01□□□□□ -0.65
COL6A4P1-203ENST00000491915 ZNF384Q8TF68 577 aa11.01□□□□□ -0.65
COL6A4P1-203ENST00000491915 CNKSR2Q8WXI2 1034 aa11.01□□□□□ -0.65
COL6A4P1-203ENST00000491915 WNK4Q96J92 1243 aa11.01□□□□□ -0.65
COL6A4P1-203ENST00000491915 USP40Q9NVE5 1235 aa11.01□□□□□ -0.65
COL6A4P1-203ENST00000491915 SALL1Q9NSC2 1324 aa11.01□□□□□ -0.65
COL6A4P1-203ENST00000491915 IREB2P48200 963 aaKnown RBP11□□□□□ -0.65
COL6A4P1-203ENST00000491915 TNNI2P48788 182 aa11□□□□□ -0.65
COL6A4P1-203ENST00000491915 MAP3K9P80192 1104 aa11□□□□□ -0.65
COL6A4P1-203ENST00000491915 TCP10Q12799 353 aa11□□□□□ -0.65
COL6A4P1-203ENST00000491915 TNFAIP1Q13829 316 aa11□□□□□ -0.65
COL6A4P1-203ENST00000491915 MVPQ14764 893 aaKnown RBP11□□□□□ -0.65
COL6A4P1-203ENST00000491915 FKBP1CQ5VVH2 108 aa11□□□□□ -0.65
COL6A4P1-203ENST00000491915 CEP85Q6P2H3 762 aa11□□□□□ -0.65
COL6A4P1-203ENST00000491915 MIGA2Q7L4E1 593 aa11□□□□□ -0.65
COL6A4P1-203ENST00000491915 DBNDD2Q9BQY9 259 aa11□□□□□ -0.65
COL6A4P1-203ENST00000491915 ELP3Q9H9T3 547 aa11□□□□□ -0.65
COL6A4P1-203ENST00000491915 SNRKQ9NRH2 765 aa11□□□□□ -0.65
COL6A4P1-203ENST00000491915 SAGE1Q9NXZ1 904 aa11□□□□□ -0.65
COL6A4P1-203ENST00000491915 FAM198AQ9UFP1 575 aa11□□□□□ -0.65
COL6A4P1-203ENST00000491915 ABCF2Q9UG63 623 aa11□□□□□ -0.65
COL6A4P1-203ENST00000491915 RCAN3Q9UKA8 241 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms