RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 DCTN4Q9UJW0 460 aa6.84□□□□□ -1.31
VTA1-204ENST00000491881 ARID1BQ8NFD5 2236 aaPredicted RBP6.83□□□□□ -1.32
VTA1-204ENST00000491881 USP11P51784 963 aa6.83□□□□□ -1.32
VTA1-204ENST00000491881 IKBKEQ14164 716 aa6.83□□□□□ -1.32
VTA1-204ENST00000491881 ECM1Q16610 540 aa6.83□□□□□ -1.32
VTA1-204ENST00000491881 PAOXQ6QHF9 649 aa6.83□□□□□ -1.32
VTA1-204ENST00000491881 SMG8Q8ND04 991 aaKnown RBP6.83□□□□□ -1.32
VTA1-204ENST00000491881 TMC1Q8TDI8 760 aa6.83□□□□□ -1.32
VTA1-204ENST00000491881 EDEM1Q92611 657 aa6.83□□□□□ -1.32
VTA1-204ENST00000491881 ASIC4Q96FT7 647 aa6.83□□□□□ -1.32
VTA1-204ENST00000491881 METTL22Q9BUU2 404 aaPredicted RBP6.83□□□□□ -1.32
VTA1-204ENST00000491881 TMPRSS13Q9BYE2 586 aa6.83□□□□□ -1.32
VTA1-204ENST00000491881 SUGCTQ9HAC7 445 aa6.83□□□□□ -1.32
VTA1-204ENST00000491881 SOX1O00570 391 aaPredicted RBP6.82□□□□□ -1.32
VTA1-204ENST00000491881 FZD6O60353 706 aa6.82□□□□□ -1.32
VTA1-204ENST00000491881 TIAF1O95411 115 aa6.82□□□□□ -1.32
VTA1-204ENST00000491881 PRNPP04156 253 aa6.82□□□□□ -1.32
VTA1-204ENST00000491881 USP5P45974 858 aa6.82□□□□□ -1.32
VTA1-204ENST00000491881 C8orf34Q49A92 452 aa6.82□□□□□ -1.32
VTA1-204ENST00000491881 XKR5Q6UX68 686 aa6.82□□□□□ -1.32
VTA1-204ENST00000491881 TMEM102Q8N9M5 508 aaPredicted RBP6.82□□□□□ -1.32
VTA1-204ENST00000491881 BSNDQ8WZ55 320 aa6.82□□□□□ -1.32
VTA1-204ENST00000491881 PMEPA1Q969W9 287 aa6.82□□□□□ -1.32
VTA1-204ENST00000491881 LOC100289279A0A1B0GTE1 492 aa6.81□□□□□ -1.32
VTA1-204ENST00000491881 CYP26A1O43174 497 aa6.81□□□□□ -1.32
VTA1-204ENST00000491881 MZF1P28698 734 aaPredicted RBP6.81□□□□□ -1.32
VTA1-204ENST00000491881 JAG1P78504 1218 aa6.81□□□□□ -1.32
VTA1-204ENST00000491881 CBLL1Q75N03 491 aa6.81□□□□□ -1.32
VTA1-204ENST00000491881 ZSCAN29Q8IWY8 852 aaPredicted RBP6.81□□□□□ -1.32
VTA1-204ENST00000491881 SHISA5Q8N114 240 aa6.81□□□□□ -1.32
VTA1-204ENST00000491881 FBLIM1Q8WUP2 373 aa6.81□□□□□ -1.32
VTA1-204ENST00000491881 OSMRQ99650 979 aa6.81□□□□□ -1.32
VTA1-204ENST00000491881 CCDC87Q9NVE4 849 aa6.81□□□□□ -1.32
VTA1-204ENST00000491881 POLIQ9UNA4 740 aa6.81□□□□□ -1.32
VTA1-204ENST00000491881 A6NHS1 94 aa6.8□□□□□ -1.32
VTA1-204ENST00000491881 PDGFAP04085 211 aa6.8□□□□□ -1.32
VTA1-204ENST00000491881 DRD2P14416 443 aa6.8□□□□□ -1.32
VTA1-204ENST00000491881 PDE3BQ13370 1112 aa6.8□□□□□ -1.32
VTA1-204ENST00000491881 NXPE3Q969Y0 559 aa6.8□□□□□ -1.32
VTA1-204ENST00000491881 TBC1D32Q96NH3 1257 aa6.8□□□□□ -1.32
VTA1-204ENST00000491881 YIPF2Q9BWQ6 316 aa6.8□□□□□ -1.32
VTA1-204ENST00000491881 BSDC1Q9NW68 430 aaPredicted RBP6.8□□□□□ -1.32
VTA1-204ENST00000491881 EXOSC6Q5RKV6 272 aaKnown RBP6.79□□□□□ -1.32
VTA1-204ENST00000491881 CDPF1Q6NVV7 123 aa6.79□□□□□ -1.32
VTA1-204ENST00000491881 VN1R5Q7Z5H4 357 aa6.79□□□□□ -1.32
VTA1-204ENST00000491881 ASAP3Q8TDY4 903 aa6.79□□□□□ -1.32
VTA1-204ENST00000491881 CITED4Q96RK1 184 aa6.79□□□□□ -1.32
VTA1-204ENST00000491881 ZKSCAN3Q9BRR0 538 aa6.79□□□□□ -1.32
VTA1-204ENST00000491881 RBCK1Q9BYM8 510 aa6.79□□□□□ -1.32
VTA1-204ENST00000491881 CHRDQ9H2X0 955 aa6.79□□□□□ -1.32
VTA1-204ENST00000491881 GGNBP2Q9H3C7 697 aa6.79□□□□□ -1.32
VTA1-204ENST00000491881 DLGAP3O95886 979 aa6.78□□□□□ -1.32
VTA1-204ENST00000491881 C8AP07357 584 aa6.78□□□□□ -1.32
VTA1-204ENST00000491881 JUNBP17275 347 aaPredicted RBP6.78□□□□□ -1.32
VTA1-204ENST00000491881 EHHADHQ08426 723 aa6.78□□□□□ -1.32
VTA1-204ENST00000491881 NFXL1Q6ZNB6 911 aa6.78□□□□□ -1.32
VTA1-204ENST00000491881 ZAR1Q86SH2 424 aa6.78□□□□□ -1.32
VTA1-204ENST00000491881 POU5F2Q8N7G0 328 aa6.78□□□□□ -1.32
VTA1-204ENST00000491881 AGBL5Q8NDL9 886 aa6.78□□□□□ -1.32
VTA1-204ENST00000491881 FLCNQ8NFG4 579 aa6.78□□□□□ -1.32
VTA1-204ENST00000491881 SOX17Q9H6I2 414 aaPredicted RBP6.78□□□□□ -1.32
VTA1-204ENST00000491881 ERCC3P19447 782 aa6.77□□□□□ -1.33
VTA1-204ENST00000491881 ADMP35318 185 aa6.77□□□□□ -1.33
VTA1-204ENST00000491881 SOX4Q06945 474 aaPredicted RBP6.77□□□□□ -1.33
VTA1-204ENST00000491881 TMC7Q7Z402 723 aa6.77□□□□□ -1.33
VTA1-204ENST00000491881 GJD3Q8N144 294 aa6.77□□□□□ -1.33
VTA1-204ENST00000491881 C2CD4AQ8NCU7 369 aaPredicted RBP6.77□□□□□ -1.33
VTA1-204ENST00000491881 DMRTB1Q96MA1 342 aa6.77□□□□□ -1.33
VTA1-204ENST00000491881 ASB16Q96NS5 453 aa6.77□□□□□ -1.33
VTA1-204ENST00000491881 PRKAG2Q9UGJ0 569 aa6.77□□□□□ -1.33
VTA1-204ENST00000491881 ANKRD33BA6NCL7 494 aa6.76□□□□□ -1.33
VTA1-204ENST00000491881 EREGO14944 169 aa6.76□□□□□ -1.33
VTA1-204ENST00000491881 EDN3P14138 238 aa6.76□□□□□ -1.33
VTA1-204ENST00000491881 ITGB5P18084 799 aa6.76□□□□□ -1.33
VTA1-204ENST00000491881 GSTM4Q03013 218 aa6.76□□□□□ -1.33
VTA1-204ENST00000491881 DUSP27Q5VZP5 1158 aa6.76□□□□□ -1.33
VTA1-204ENST00000491881 DNAJC14Q6Y2X3 702 aaPredicted RBP6.76□□□□□ -1.33
VTA1-204ENST00000491881 FAM170BA6NMN3 283 aa6.75□□□□□ -1.33
VTA1-204ENST00000491881 PHACTR2O75167 634 aa6.75□□□□□ -1.33
VTA1-204ENST00000491881 ESRRAP11474 423 aaPredicted RBP6.75□□□□□ -1.33
VTA1-204ENST00000491881 COL19A1Q14993 1142 aa6.75□□□□□ -1.33
VTA1-204ENST00000491881 EZH1Q92800 747 aaPredicted RBP6.75□□□□□ -1.33
VTA1-204ENST00000491881 FAM129BQ96TA1 746 aa6.75□□□□□ -1.33
VTA1-204ENST00000491881 LRRC4CQ9HCJ2 640 aa6.75□□□□□ -1.33
VTA1-204ENST00000491881 EIF4EBP3O60516 100 aaPredicted RBP6.74□□□□□ -1.33
VTA1-204ENST00000491881 BHLHE41Q9C0J9 482 aaPredicted RBP6.74□□□□□ -1.33
VTA1-204ENST00000491881 PAK6Q9NQU5 681 aaPredicted RBP6.74□□□□□ -1.33
VTA1-204ENST00000491881 GPR182O15218 404 aa6.73□□□□□ -1.33
VTA1-204ENST00000491881 NEFLP07196 543 aa6.73□□□□□ -1.33
VTA1-204ENST00000491881 ADH5P11766 374 aa6.73□□□□□ -1.33
VTA1-204ENST00000491881 RAB6AP20340 208 aa6.73□□□□□ -1.33
VTA1-204ENST00000491881 CYP27A1Q02318 531 aa6.73□□□□□ -1.33
VTA1-204ENST00000491881 MAP7Q14244 749 aa6.73□□□□□ -1.33
VTA1-204ENST00000491881 ZC3H7BQ9UGR2 993 aaKnown RBP6.73□□□□□ -1.33
VTA1-204ENST00000491881 TREHO43280 583 aa6.72□□□□□ -1.33
VTA1-204ENST00000491881 TNFRSF21O75509 655 aa6.72□□□□□ -1.33
VTA1-204ENST00000491881 NFICP08651 508 aa6.72□□□□□ -1.33
VTA1-204ENST00000491881 PLCB3Q01970 1234 aa6.72□□□□□ -1.33
VTA1-204ENST00000491881 RGS22Q8NE09 1264 aa6.72□□□□□ -1.33
VTA1-204ENST00000491881 SNX29Q8TEQ0 813 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms