RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 MEI1Q5TIA1 1274 aa6.74□□□□□ -1.33
RTN4-215ENST00000491592 DMRTC2Q8IXT2 367 aaPredicted RBP6.74□□□□□ -1.33
RTN4-215ENST00000491592 SRA1Q9HD15 236 aaKnown RBP6.74□□□□□ -1.33
RTN4-215ENST00000491592 BCCIPQ9P287 314 aaKnown RBP eCLIP6.74□□□□□ -1.33
RTN4-215ENST00000491592 TTF2Q9UNY4 1162 aaKnown RBP6.74□□□□□ -1.33
RTN4-215ENST00000491592 SCO2A0A1W2PP80 73 aa6.73□□□□□ -1.33
RTN4-215ENST00000491592 FBXO24O75426 580 aa6.73□□□□□ -1.33
RTN4-215ENST00000491592 B3GALT4O96024 378 aa6.73□□□□□ -1.33
RTN4-215ENST00000491592 ESRRAP11474 423 aaPredicted RBP6.73□□□□□ -1.33
RTN4-215ENST00000491592 PIP4K2BP78356 416 aa6.73□□□□□ -1.33
RTN4-215ENST00000491592 FAAP100Q0VG06 881 aa6.73□□□□□ -1.33
RTN4-215ENST00000491592 TSNAXIP1Q2TAA8 658 aa6.73□□□□□ -1.33
RTN4-215ENST00000491592 TRAPPC3LQ5T215 181 aa6.73□□□□□ -1.33
RTN4-215ENST00000491592 FAM117BQ6P1L5 589 aa6.73□□□□□ -1.33
RTN4-215ENST00000491592 ILDR2Q71H61 639 aa6.73□□□□□ -1.33
RTN4-215ENST00000491592 DTWD1Q8N5C7 304 aa6.73□□□□□ -1.33
RTN4-215ENST00000491592 CARD10Q9BWT7 1032 aa6.73□□□□□ -1.33
RTN4-215ENST00000491592 ZFYVE1Q9HBF4 777 aa6.73□□□□□ -1.33
RTN4-215ENST00000491592 GPN3Q9UHW5 284 aaPredicted RBP6.73□□□□□ -1.33
RTN4-215ENST00000491592 A0A0A0MRY4 1105 aa6.72□□□□□ -1.33
RTN4-215ENST00000491592 PPM1GO15355 546 aaPredicted RBP6.72□□□□□ -1.33
RTN4-215ENST00000491592 TPTE2Q6XPS3 522 aa6.72□□□□□ -1.33
RTN4-215ENST00000491592 MAP4K3Q8IVH8 894 aa6.72□□□□□ -1.33
RTN4-215ENST00000491592 ANKRD24Q8TF21 1146 aa6.72□□□□□ -1.33
RTN4-215ENST00000491592 SLC7A3Q8WY07 619 aa6.72□□□□□ -1.33
RTN4-215ENST00000491592 WNT8BQ93098 351 aa6.72□□□□□ -1.33
RTN4-215ENST00000491592 TPSG1Q9NRR2 321 aa6.72□□□□□ -1.33
RTN4-215ENST00000491592 FSCN2O14926 492 aa6.71□□□□□ -1.34
RTN4-215ENST00000491592 DYRK3O43781 588 aa6.71□□□□□ -1.34
RTN4-215ENST00000491592 DEAF1O75398 565 aaPredicted RBP6.71□□□□□ -1.34
RTN4-215ENST00000491592 ST13P50502 369 aaKnown RBP6.71□□□□□ -1.34
RTN4-215ENST00000491592 RAC1P63000 192 aa6.71□□□□□ -1.34
RTN4-215ENST00000491592 SETDB1Q15047 1291 aa6.71□□□□□ -1.34
RTN4-215ENST00000491592 ZNF423Q2M1K9 1284 aa6.71□□□□□ -1.34
RTN4-215ENST00000491592 FMR1NBQ8N0W7 255 aaPredicted RBP6.71□□□□□ -1.34
RTN4-215ENST00000491592 BACH2Q9BYV9 841 aa6.71□□□□□ -1.34
RTN4-215ENST00000491592 SOX17Q9H6I2 414 aaPredicted RBP6.71□□□□□ -1.34
RTN4-215ENST00000491592 OSGEPQ9NPF4 335 aa6.71□□□□□ -1.34
RTN4-215ENST00000491592 SEC31BQ9NQW1 1179 aa6.71□□□□□ -1.34
RTN4-215ENST00000491592 C9orf172C9J069 976 aa6.7□□□□□ -1.34
RTN4-215ENST00000491592 FAM229AH3BQW9 127 aa6.7□□□□□ -1.34
RTN4-215ENST00000491592 SOX1O00570 391 aaPredicted RBP6.7□□□□□ -1.34
RTN4-215ENST00000491592 CELA3AP09093 270 aa6.7□□□□□ -1.34
RTN4-215ENST00000491592 C19orf57Q0VDD7 668 aa6.7□□□□□ -1.34
RTN4-215ENST00000491592 LDLRAD1Q5T700 205 aa6.7□□□□□ -1.34
RTN4-215ENST00000491592 HGSNATQ68CP4 663 aa6.7□□□□□ -1.34
RTN4-215ENST00000491592 CEP44Q9C0F1 390 aa6.7□□□□□ -1.34
RTN4-215ENST00000491592 ENC1O14682 589 aa6.69□□□□□ -1.34
RTN4-215ENST00000491592 ARL4DP49703 201 aa6.69□□□□□ -1.34
RTN4-215ENST00000491592 ZNF157P51786 506 aaPredicted RBP6.69□□□□□ -1.34
RTN4-215ENST00000491592 TAF1CQ15572 869 aaPredicted RBP6.69□□□□□ -1.34
RTN4-215ENST00000491592 CCDC85BQ15834 202 aaPredicted RBP6.69□□□□□ -1.34
RTN4-215ENST00000491592 FOXD4L6Q3SYB3 417 aaPredicted RBP6.69□□□□□ -1.34
RTN4-215ENST00000491592 FOXD4L3Q6VB84 417 aaPredicted RBP6.69□□□□□ -1.34
RTN4-215ENST00000491592 KLHL23Q8NBE8 558 aa6.69□□□□□ -1.34
RTN4-215ENST00000491592 TMEM87AQ8NBN3 555 aa6.69□□□□□ -1.34
RTN4-215ENST00000491592 GALNT11Q8NCW6 608 aa6.69□□□□□ -1.34
RTN4-215ENST00000491592 DCAF11Q8TEB1 546 aa6.69□□□□□ -1.34
RTN4-215ENST00000491592 NECAB3Q96P71 396 aaPredicted RBP6.69□□□□□ -1.34
RTN4-215ENST00000491592 TRIM56Q9BRZ2 755 aaKnown RBP6.69□□□□□ -1.34
RTN4-215ENST00000491592 ZFP64Q9NPA5 681 aa6.69□□□□□ -1.34
RTN4-215ENST00000491592 TMEM39AQ9NV64 488 aa6.69□□□□□ -1.34
RTN4-215ENST00000491592 ARID4BQ4LE39 1312 aaPredicted RBP6.69□□□□□ -1.34
RTN4-215ENST00000491592 USP31Q70CQ4 1352 aa6.69□□□□□ -1.34
RTN4-215ENST00000491592 TM4SF5O14894 197 aa6.68□□□□□ -1.34
RTN4-215ENST00000491592 ELNP15502 786 aa6.68□□□□□ -1.34
RTN4-215ENST00000491592 GSTM4Q03013 218 aa6.68□□□□□ -1.34
RTN4-215ENST00000491592 PPP2R3AQ06190 1150 aa6.68□□□□□ -1.34
RTN4-215ENST00000491592 ARTNQ5T4W7 220 aa6.68□□□□□ -1.34
RTN4-215ENST00000491592 FBXO11Q86XK2 927 aa6.68□□□□□ -1.34
RTN4-215ENST00000491592 PSMD1Q99460 953 aa6.68□□□□□ -1.34
RTN4-215ENST00000491592 SCAMP3O14828 347 aaKnown RBP6.67□□□□□ -1.34
RTN4-215ENST00000491592 ADAM11O75078 769 aa6.67□□□□□ -1.34
RTN4-215ENST00000491592 H2AFB1P0C5Y9 115 aa6.67□□□□□ -1.34
RTN4-215ENST00000491592 H2AFB2P0C5Z0 115 aa6.67□□□□□ -1.34
RTN4-215ENST00000491592 NLRP12P59046 1061 aa6.67□□□□□ -1.34
RTN4-215ENST00000491592 FANCCQ00597 558 aa6.67□□□□□ -1.34
RTN4-215ENST00000491592 GRIK4Q16099 956 aa6.67□□□□□ -1.34
RTN4-215ENST00000491592 SV2BQ7L1I2 683 aa6.67□□□□□ -1.34
RTN4-215ENST00000491592 DDX54Q8TDD1 881 aaKnown RBP6.67□□□□□ -1.34
RTN4-215ENST00000491592 KLHDC7BQ96G42 594 aa6.67□□□□□ -1.34
RTN4-215ENST00000491592 NOC4LQ9BVI4 516 aaKnown RBP6.67□□□□□ -1.34
RTN4-215ENST00000491592 KRTAP9-2Q9BYQ4 174 aa6.67□□□□□ -1.34
RTN4-215ENST00000491592 NRSN2Q9GZP1 204 aa6.67□□□□□ -1.34
RTN4-215ENST00000491592 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.66□□□□□ -1.34
RTN4-215ENST00000491592 DLL1O00548 723 aa6.66□□□□□ -1.34
RTN4-215ENST00000491592 PAGE1O75459 146 aa6.66□□□□□ -1.34
RTN4-215ENST00000491592 CLSTN1O94985 981 aa6.66□□□□□ -1.34
RTN4-215ENST00000491592 CD68P34810 354 aaPredicted RBP6.66□□□□□ -1.34
RTN4-215ENST00000491592 ZNF76P36508 570 aa6.66□□□□□ -1.34
RTN4-215ENST00000491592 AP3B2Q13367 1082 aa6.66□□□□□ -1.34
RTN4-215ENST00000491592 PRSS36Q5K4E3 855 aa6.66□□□□□ -1.34
RTN4-215ENST00000491592 PCNX4Q63HM2 1172 aa6.66□□□□□ -1.34
RTN4-215ENST00000491592 NBPF11Q86T75 865 aa6.66□□□□□ -1.34
RTN4-215ENST00000491592 SULF2Q8IWU5 870 aa6.66□□□□□ -1.34
RTN4-215ENST00000491592 USP26Q9BXU7 913 aa6.66□□□□□ -1.34
RTN4-215ENST00000491592 METTL5Q9NRN9 209 aaKnown RBP6.66□□□□□ -1.34
RTN4-215ENST00000491592 DDX3YO15523 660 aaKnown RBP6.65□□□□□ -1.34
RTN4-215ENST00000491592 EIF4EBP3O60516 100 aaPredicted RBP6.65□□□□□ -1.34
RTN4-215ENST00000491592 TCF3P15923 654 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms