RNA–Protein interactions for RNA: ENST00000491094.6

VPS72-205, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 5

Gene VPS72, Length 4,267 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-205ENST00000491094 UBXN4Q92575 508 aa12.9□□□□□ -0.34
VPS72-205ENST00000491094 METAP2P50579 478 aaKnown RBP eCLIP12.9□□□□□ -0.34
VPS72-205ENST00000491094 UTP14CQ5TAP6 766 aaKnown RBP12.9□□□□□ -0.34
VPS72-205ENST00000491094 LDHAL6AQ6ZMR3 332 aa12.9□□□□□ -0.34
VPS72-205ENST00000491094 ANKARQ7Z5J8 1434 aa12.89□□□□□ -0.35
VPS72-205ENST00000491094 TMEM232C9JQI7 657 aa12.89□□□□□ -0.35
VPS72-205ENST00000491094 CDC25BP30305 580 aa12.89□□□□□ -0.35
VPS72-205ENST00000491094 KLHL10Q6JEL2 608 aa12.89□□□□□ -0.35
VPS72-205ENST00000491094 CNNM3Q8NE01 707 aa12.89□□□□□ -0.35
VPS72-205ENST00000491094 ERO1AQ96HE7 468 aa12.89□□□□□ -0.35
VPS72-205ENST00000491094 UBR1Q8IWV7 1749 aa12.89□□□□□ -0.35
VPS72-205ENST00000491094 FOXN1O15353 648 aa12.89□□□□□ -0.35
VPS72-205ENST00000491094 ATF3P18847 181 aa12.89□□□□□ -0.35
VPS72-205ENST00000491094 RBM6P78332 1123 aaKnown RBP12.89□□□□□ -0.35
VPS72-205ENST00000491094 OLFM4Q6UX06 510 aa12.89□□□□□ -0.35
VPS72-205ENST00000491094 TRMT44Q8IYL2 757 aaKnown RBP12.89□□□□□ -0.35
VPS72-205ENST00000491094 SLC26A6Q9BXS9 759 aa12.89□□□□□ -0.35
VPS72-205ENST00000491094 SH3TC1Q8TE82 1336 aa12.89□□□□□ -0.35
VPS72-205ENST00000491094 TOP1P11387 765 aaKnown RBP12.89□□□□□ -0.35
VPS72-205ENST00000491094 VPS37DQ86XT2 251 aa12.89□□□□□ -0.35
VPS72-205ENST00000491094 FANCLQ9NW38 375 aa12.89□□□□□ -0.35
VPS72-205ENST00000491094 CPLX2Q6PUV4 134 aaKnown RBP12.88□□□□□ -0.35
VPS72-205ENST00000491094 NYAP1Q6ZVC0 841 aa12.88□□□□□ -0.35
VPS72-205ENST00000491094 NKX2-3Q8TAU0 364 aa12.88□□□□□ -0.35
VPS72-205ENST00000491094 NUP133Q8WUM0 1156 aa12.88□□□□□ -0.35
VPS72-205ENST00000491094 CARD6Q9BX69 1037 aa12.88□□□□□ -0.35
VPS72-205ENST00000491094 FMN2Q9NZ56 1722 aa12.88□□□□□ -0.35
VPS72-205ENST00000491094 H7C1W4 665 aa12.88□□□□□ -0.35
VPS72-205ENST00000491094 ZBTB22O15209 634 aa12.88□□□□□ -0.35
VPS72-205ENST00000491094 IFIT5Q13325 482 aaKnown RBP12.88□□□□□ -0.35
VPS72-205ENST00000491094 KRT40Q6A162 431 aa12.88□□□□□ -0.35
VPS72-205ENST00000491094 NLRP12P59046 1061 aa12.88□□□□□ -0.35
VPS72-205ENST00000491094 KCNJ14Q9UNX9 436 aa12.88□□□□□ -0.35
VPS72-205ENST00000491094 ADKP55263 362 aaKnown RBP12.88□□□□□ -0.35
VPS72-205ENST00000491094 GRAMD1CQ8IYS0 662 aa12.88□□□□□ -0.35
VPS72-205ENST00000491094 HEG1Q9ULI3 1381 aa12.87□□□□□ -0.35
VPS72-205ENST00000491094 KARSQ15046 597 aaKnown RBP12.87□□□□□ -0.35
VPS72-205ENST00000491094 TEX35Q5T0J7 233 aa12.87□□□□□ -0.35
VPS72-205ENST00000491094 NALCNQ8IZF0 1738 aa12.87□□□□□ -0.35
VPS72-205ENST00000491094 COBLO75128 1261 aa12.87□□□□□ -0.35
VPS72-205ENST00000491094 SEC31AO94979 1220 aaKnown RBP12.87□□□□□ -0.35
VPS72-205ENST00000491094 ANTXR2P58335 489 aa12.87□□□□□ -0.35
VPS72-205ENST00000491094 GNG11P61952 73 aa12.87□□□□□ -0.35
VPS72-205ENST00000491094 KIF23Q02241 960 aaPredicted RBP12.87□□□□□ -0.35
VPS72-205ENST00000491094 IQSEC3Q9UPP2 1182 aaPredicted RBP12.87□□□□□ -0.35
VPS72-205ENST00000491094 hCG_1642624A0A1W2PR95 340 aa12.87□□□□□ -0.35
VPS72-205ENST00000491094 IARSP41252 1262 aaKnown RBP12.87□□□□□ -0.35
VPS72-205ENST00000491094 CACNA1FO60840 1977 aa12.87□□□□□ -0.35
VPS72-205ENST00000491094 GOLGA8AA7E2F4 631 aa12.86□□□□□ -0.35
VPS72-205ENST00000491094 CASP7P55210 303 aa12.86□□□□□ -0.35
VPS72-205ENST00000491094 CTDSPL2Q05D32 466 aa12.86□□□□□ -0.35
VPS72-205ENST00000491094 LRRFIP1Q32MZ4 808 aaKnown RBP12.86□□□□□ -0.35
VPS72-205ENST00000491094 DESI2Q9BSY9 194 aa12.86□□□□□ -0.35
VPS72-205ENST00000491094 PRDM11Q9NQV5 511 aa12.86□□□□□ -0.35
VPS72-205ENST00000491094 HPS5Q9UPZ3 1129 aa12.86□□□□□ -0.35
VPS72-205ENST00000491094 KIF20AO95235 890 aa12.86□□□□□ -0.35
VPS72-205ENST00000491094 STX17P56962 302 aa12.86□□□□□ -0.35
VPS72-205ENST00000491094 LONRF3Q496Y0 759 aa12.86□□□□□ -0.35
VPS72-205ENST00000491094 TMEM67Q5HYA8 995 aa12.86□□□□□ -0.35
VPS72-205ENST00000491094 LRP10Q7Z4F1 713 aa12.86□□□□□ -0.35
VPS72-205ENST00000491094 CCDC150Q8NCX0 1101 aa12.86□□□□□ -0.35
VPS72-205ENST00000491094 PCDHA5Q9Y5H7 936 aa12.86□□□□□ -0.35
VPS72-205ENST00000491094 IFIT3O14879 490 aaKnown RBP12.86□□□□□ -0.35
VPS72-205ENST00000491094 CYB5R4Q7L1T6 521 aa12.86□□□□□ -0.35
VPS72-205ENST00000491094 MROH7-TTC4A0A0A0MT08 1334 aa12.86□□□□□ -0.35
VPS72-205ENST00000491094 CDC27P30260 824 aa12.85□□□□□ -0.35
VPS72-205ENST00000491094 APPBP2Q92624 585 aa12.85□□□□□ -0.35
VPS72-205ENST00000491094 AIDAQ96BJ3 306 aa12.85□□□□□ -0.35
VPS72-205ENST00000491094 CCDC34Q96HJ3 373 aa12.85□□□□□ -0.35
VPS72-205ENST00000491094 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.85□□□□□ -0.353e-9■■□□□ 12.7
VPS72-205ENST00000491094 TUBGCP6Q96RT7 1819 aa12.85□□□□□ -0.35
VPS72-205ENST00000491094 BTBD18B2RXH4 712 aa12.85□□□□□ -0.35
VPS72-205ENST00000491094 YEATS4O95619 227 aa12.85□□□□□ -0.35
VPS72-205ENST00000491094 CCDC102BQ68D86 513 aa12.85□□□□□ -0.35
VPS72-205ENST00000491094 ATL3Q6DD88 541 aa12.85□□□□□ -0.35
VPS72-205ENST00000491094 KDM6AO15550 1401 aaPredicted RBP12.85□□□□□ -0.35
VPS72-205ENST00000491094 A0A1W2PQ27 194 aa12.85□□□□□ -0.35
VPS72-205ENST00000491094 A0A1W2PQ64 194 aa12.85□□□□□ -0.35
VPS72-205ENST00000491094 A0A1W2PQD8 194 aa12.85□□□□□ -0.35
VPS72-205ENST00000491094 ZBTB43O43298 467 aa12.85□□□□□ -0.35
VPS72-205ENST00000491094 CLCN6P51797 869 aa12.85□□□□□ -0.35
VPS72-205ENST00000491094 AXDND1Q5T1B0 1012 aaPredicted RBP12.85□□□□□ -0.35
VPS72-205ENST00000491094 ZFP91Q96JP5 570 aaPredicted RBP12.85□□□□□ -0.35
VPS72-205ENST00000491094 ZCCHC17Q9NP64 241 aaKnown RBP12.85□□□□□ -0.35
VPS72-205ENST00000491094 AKAP2Q9Y2D5 859 aa12.85□□□□□ -0.35
VPS72-205ENST00000491094 TOPAZ1Q8N9V7 1692 aa12.84□□□□□ -0.35
VPS72-205ENST00000491094 CMA1P23946 247 aa12.84□□□□□ -0.35
VPS72-205ENST00000491094 AFMP43652 599 aa12.84□□□□□ -0.35
VPS72-205ENST00000491094 MYL5Q02045 173 aa12.84□□□□□ -0.35
VPS72-205ENST00000491094 SHC4Q6S5L8 630 aa12.84□□□□□ -0.35
VPS72-205ENST00000491094 TMCO3Q6UWJ1 677 aa12.84□□□□□ -0.35
VPS72-205ENST00000491094 STAMQ92783 540 aa12.84□□□□□ -0.35
VPS72-205ENST00000491094 POLR3EQ9NVU0 708 aa12.84□□□□□ -0.35
VPS72-205ENST00000491094 SLFN14P0C7P3 912 aa12.84□□□□□ -0.35
VPS72-205ENST00000491094 ETF1P62495 437 aaKnown RBP12.84□□□□□ -0.35
VPS72-205ENST00000491094 BRAPQ7Z569 592 aa12.84□□□□□ -0.35
VPS72-205ENST00000491094 TBC1D10CQ8IV04 446 aa12.84□□□□□ -0.35
VPS72-205ENST00000491094 JMYQ8N9B5 988 aa12.84□□□□□ -0.35
VPS72-205ENST00000491094 ZCRB1Q8TBF4 217 aaKnown RBP12.84□□□□□ -0.35
VPS72-205ENST00000491094 KCNH3Q9ULD8 1083 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms