RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 AGBL3Q8NEM8 1001 aa22.51■■□□□ 1.19
MCF2L-230ENST00000491028 ZNF541Q9H0D2 1346 aa22.51■■□□□ 1.19
MCF2L-230ENST00000491028 RNF113AO15541 343 aaKnown RBP22.5■■□□□ 1.19
MCF2L-230ENST00000491028 PDE6AP16499 860 aa22.5■■□□□ 1.19
MCF2L-230ENST00000491028 RPS12P25398 132 aaKnown RBP22.5■■□□□ 1.19
MCF2L-230ENST00000491028 UBE3CQ15386 1083 aa22.5■■□□□ 1.19
MCF2L-230ENST00000491028 SLC9C2Q5TAH2 1124 aa22.5■■□□□ 1.19
MCF2L-230ENST00000491028 CASC1Q6TDU7 716 aa22.5■■□□□ 1.19
MCF2L-230ENST00000491028 NSUN4Q96CB9 384 aaKnown RBP22.5■■□□□ 1.19
MCF2L-230ENST00000491028 DIAPH3Q9NSV4 1193 aa22.5■■□□□ 1.19
MCF2L-230ENST00000491028 GSTO1P78417 241 aa22.49■■□□□ 1.19
MCF2L-230ENST00000491028 MECOMQ03112 1051 aa22.49■■□□□ 1.19
MCF2L-230ENST00000491028 GRIK5Q16478 980 aa22.49■■□□□ 1.19
MCF2L-230ENST00000491028 NAA16Q6N069 864 aaPredicted RBP22.49■■□□□ 1.19
MCF2L-230ENST00000491028 SLF2Q8IX21 1173 aa22.49■■□□□ 1.19
MCF2L-230ENST00000491028 MAGEB6Q8N7X4 407 aa22.49■■□□□ 1.19
MCF2L-230ENST00000491028 GMLQ99445 158 aa22.49■■□□□ 1.19
MCF2L-230ENST00000491028 MXD3Q9BW11 206 aa22.49■■□□□ 1.19
MCF2L-230ENST00000491028 MYH2Q9UKX2 1941 aa22.49■■□□□ 1.19
MCF2L-230ENST00000491028 CHMLP26374 656 aa22.48■■□□□ 1.19
MCF2L-230ENST00000491028 MMP14P50281 582 aa22.48■■□□□ 1.19
MCF2L-230ENST00000491028 GPC2Q8N158 579 aa22.48■■□□□ 1.19
MCF2L-230ENST00000491028 APPBP2Q92624 585 aa22.48■■□□□ 1.19
MCF2L-230ENST00000491028 TTF2Q9UNY4 1162 aaKnown RBP22.48■■□□□ 1.19
MCF2L-230ENST00000491028 TCRBV5S4A2TA0A5A2 114 aa22.47■■□□□ 1.19
MCF2L-230ENST00000491028 LDHCP07864 332 aa22.47■■□□□ 1.19
MCF2L-230ENST00000491028 HDLBPQ00341 1268 aaKnown RBP22.47■■□□□ 1.19
MCF2L-230ENST00000491028 RUFY2Q8WXA3 655 aa22.47■■□□□ 1.19
MCF2L-230ENST00000491028 ZNF532Q9HCE3 1301 aa22.47■■□□□ 1.19
MCF2L-230ENST00000491028 ZMYM1Q5SVZ6 1142 aa22.46■■□□□ 1.19
MCF2L-230ENST00000491028 KIAA0825Q8IV33 1275 aa22.46■■□□□ 1.19
MCF2L-230ENST00000491028 ZNF384Q8TF68 577 aa22.46■■□□□ 1.19
MCF2L-230ENST00000491028 DPF2Q92785 391 aa22.46■■□□□ 1.19
MCF2L-230ENST00000491028 FAM163AQ96GL9 167 aaPredicted RBP22.46■■□□□ 1.19
MCF2L-230ENST00000491028 MRIQ9BWK5 157 aa22.46■■□□□ 1.19
MCF2L-230ENST00000491028 HELLSQ9NRZ9 838 aa22.46■■□□□ 1.19
MCF2L-230ENST00000491028 HDAC9Q9UKV0 1011 aa22.46■■□□□ 1.19
MCF2L-230ENST00000491028 GJA3Q9Y6H8 435 aa22.46■■□□□ 1.19
MCF2L-230ENST00000491028 RAD50Q92878 1312 aa22.46■■□□□ 1.19
MCF2L-230ENST00000491028 CYP7A1P22680 504 aa22.45■■□□□ 1.18
MCF2L-230ENST00000491028 NMIQ13287 307 aaPredicted RBP22.45■■□□□ 1.18
MCF2L-230ENST00000491028 SERPINA10Q9UK55 444 aa22.45■■□□□ 1.18
MCF2L-230ENST00000491028 ZBTB12Q9Y330 459 aaPredicted RBP22.45■■□□□ 1.18
MCF2L-230ENST00000491028 MROH7-TTC4A0A0A0MT08 1334 aa22.45■■□□□ 1.18
MCF2L-230ENST00000491028 F8W031 263 aaPredicted RBP22.44■■□□□ 1.18
MCF2L-230ENST00000491028 GAKO14976 1311 aa22.44■■□□□ 1.18
MCF2L-230ENST00000491028 OGFOD1Q8N543 542 aa22.44■■□□□ 1.18
MCF2L-230ENST00000491028 TEKT1Q969V4 418 aa22.44■■□□□ 1.18
MCF2L-230ENST00000491028 ADAMTSL1Q8N6G6 1762 aa22.43■■□□□ 1.18
MCF2L-230ENST00000491028 A0A0D9SFI3 127 aa22.43■■□□□ 1.18
MCF2L-230ENST00000491028 CHGBP05060 677 aa22.43■■□□□ 1.18
MCF2L-230ENST00000491028 USP17L8P0C7I0 530 aa22.43■■□□□ 1.18
MCF2L-230ENST00000491028 DPY19L2Q6NUT2 758 aa22.43■■□□□ 1.18
MCF2L-230ENST00000491028 HHIPL2Q6UWX4 724 aa22.43■■□□□ 1.18
MCF2L-230ENST00000491028 CWC27Q6UX04 472 aaKnown RBP22.43■■□□□ 1.18
MCF2L-230ENST00000491028 CERS3Q8IU89 383 aa22.43■■□□□ 1.18
MCF2L-230ENST00000491028 FAM227BQ96M60 508 aa22.43■■□□□ 1.18
MCF2L-230ENST00000491028 EIF5BO60841 1220 aaKnown RBP22.42■■□□□ 1.18
MCF2L-230ENST00000491028 CRKP46108 304 aa22.42■■□□□ 1.18
MCF2L-230ENST00000491028 GMPSP49915 693 aaPredicted RBP22.42■■□□□ 1.18
MCF2L-230ENST00000491028 DIXDC1Q155Q3 683 aa22.42■■□□□ 1.18
MCF2L-230ENST00000491028 MCMDC2Q4G0Z9 681 aa22.42■■□□□ 1.18
MCF2L-230ENST00000491028 OSBP2Q969R2 916 aa22.42■■□□□ 1.18
MCF2L-230ENST00000491028 NOL10Q9BSC4 688 aaKnown RBP22.42■■□□□ 1.18
MCF2L-230ENST00000491028 SCNN1DP51172 638 aa22.41■■□□□ 1.18
MCF2L-230ENST00000491028 MFAP1P55081 439 aaKnown RBP22.41■■□□□ 1.18
MCF2L-230ENST00000491028 SLFNL1Q499Z3 407 aa22.41■■□□□ 1.18
MCF2L-230ENST00000491028 C8orf34Q49A92 452 aa22.41■■□□□ 1.18
MCF2L-230ENST00000491028 ADGRA1Q86SQ6 560 aa22.41■■□□□ 1.18
MCF2L-230ENST00000491028 ESYT1Q9BSJ8 1104 aa22.41■■□□□ 1.18
MCF2L-230ENST00000491028 SGSM2O43147 1006 aa22.4■■□□□ 1.18
MCF2L-230ENST00000491028 DDNO94850 711 aaPredicted RBP22.4■■□□□ 1.18
MCF2L-230ENST00000491028 BAG3O95817 575 aa22.4■■□□□ 1.18
MCF2L-230ENST00000491028 ZNF280AP59817 542 aaPredicted RBP22.4■■□□□ 1.18
MCF2L-230ENST00000491028 ZDHHC15Q96MV8 337 aa22.4■■□□□ 1.18
MCF2L-230ENST00000491028 PUS7LQ9H0K6 701 aaKnown RBP22.4■■□□□ 1.18
MCF2L-230ENST00000491028 DAGLAQ9Y4D2 1042 aa22.4■■□□□ 1.18
MCF2L-230ENST00000491028 ECM29Q5VYK3 1845 aa22.39■■□□□ 1.17
MCF2L-230ENST00000491028 GPR75-ASB3A0A0A6YYF3 556 aa22.39■■□□□ 1.17
MCF2L-230ENST00000491028 MAGEB6P1A0A0J9YX57 407 aa22.39■■□□□ 1.17
MCF2L-230ENST00000491028 GLTPD2A6NH11 291 aa22.39■■□□□ 1.17
MCF2L-230ENST00000491028 M0R2C6 588 aa22.39■■□□□ 1.17
MCF2L-230ENST00000491028 PPP4CP60510 307 aa22.39■■□□□ 1.17
MCF2L-230ENST00000491028 AIDAQ96BJ3 306 aa22.39■■□□□ 1.17
MCF2L-230ENST00000491028 L3MBTL3Q96JM7 780 aaPredicted RBP22.39■■□□□ 1.17
MCF2L-230ENST00000491028 SEC62Q99442 399 aaKnown RBP22.39■■□□□ 1.17
MCF2L-230ENST00000491028 CCDC171Q6TFL3 1326 aa22.38■■□□□ 1.17
MCF2L-230ENST00000491028 WDR90Q96KV7 1748 aa22.38■■□□□ 1.17
MCF2L-230ENST00000491028 PLCG2P16885 1265 aa22.38■■□□□ 1.17
MCF2L-230ENST00000491028 BTDP43251 543 aa22.38■■□□□ 1.17
MCF2L-230ENST00000491028 MICALL2Q8IY33 904 aa22.38■■□□□ 1.17
MCF2L-230ENST00000491028 MIGA1Q8NAN2 632 aa22.38■■□□□ 1.17
MCF2L-230ENST00000491028 MTMR14Q8NCE2 650 aa22.38■■□□□ 1.17
MCF2L-230ENST00000491028 RIOK1Q9BRS2 568 aaKnown RBP22.38■■□□□ 1.17
MCF2L-230ENST00000491028 GPRC5DQ9NZD1 345 aa22.38■■□□□ 1.17
MCF2L-230ENST00000491028 CNOT7Q9UIV1 285 aaKnown RBP22.38■■□□□ 1.17
MCF2L-230ENST00000491028 SCN4AP35499 1836 aa22.37■■□□□ 1.17
MCF2L-230ENST00000491028 GPAA1O43292 621 aa22.37■■□□□ 1.17
MCF2L-230ENST00000491028 MBD4O95243 580 aa22.37■■□□□ 1.17
MCF2L-230ENST00000491028 CFAP100Q494V2 611 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms