RNA–Protein interactions for RNA: ENST00000490667.1

SHC1-211, Transcript of SHC adaptor protein 1, humanhuman

TSL 2

Gene SHC1, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-211ENST00000490667 CTCFP49711 727 aaPredicted RBP16.29■□□□□ 0.2
SHC1-211ENST00000490667 CCDC102BQ68D86 513 aa16.29■□□□□ 0.2
SHC1-211ENST00000490667 SSH3Q8TE77 659 aa16.29■□□□□ 0.2
SHC1-211ENST00000490667 XAGE2Q96GT9 111 aa16.29■□□□□ 0.2
SHC1-211ENST00000490667 NEUROD6Q96NK8 337 aa16.29■□□□□ 0.2
SHC1-211ENST00000490667 ZIC5Q96T25 663 aa16.29■□□□□ 0.2
SHC1-211ENST00000490667 TDRD3Q9H7E2 651 aaKnown RBP16.29■□□□□ 0.2
SHC1-211ENST00000490667 DENND2AQ9ULE3 1009 aa16.29■□□□□ 0.2
SHC1-211ENST00000490667 PPP2R3BQ9Y5P8 575 aa16.29■□□□□ 0.2
SHC1-211ENST00000490667 A0A1B0GUL6 1792 aa16.28■□□□□ 0.2
SHC1-211ENST00000490667 SEMA3EO15041 775 aa16.28■□□□□ 0.2
SHC1-211ENST00000490667 PRKG1Q13976 671 aa16.28■□□□□ 0.2
SHC1-211ENST00000490667 SPDYE2Q495Y8 402 aa16.28■□□□□ 0.2
SHC1-211ENST00000490667 TEKT1Q969V4 418 aa16.28■□□□□ 0.2
SHC1-211ENST00000490667 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.28■□□□□ 0.2
SHC1-211ENST00000490667 ZNF646O15015 1829 aaPredicted RBP16.27■□□□□ 0.2
SHC1-211ENST00000490667 KIF23Q02241 960 aaPredicted RBP16.27■□□□□ 0.2
SHC1-211ENST00000490667 RASA3Q14644 834 aa16.27■□□□□ 0.2
SHC1-211ENST00000490667 SUPT20HL1Q3ZLR7 823 aa16.27■□□□□ 0.2
SHC1-211ENST00000490667 ARMC9Q7Z3E5 817 aa16.27■□□□□ 0.2
SHC1-211ENST00000490667 TRPM7Q96QT4 1865 aa16.27■□□□□ 0.19
SHC1-211ENST00000490667 MAST3O60307 1309 aa16.26■□□□□ 0.19
SHC1-211ENST00000490667 ZBTB22O15209 634 aa16.26■□□□□ 0.19
SHC1-211ENST00000490667 SURF6O75683 361 aaKnown RBP16.26■□□□□ 0.19
SHC1-211ENST00000490667 SLC10A3P09131 477 aa16.26■□□□□ 0.19
SHC1-211ENST00000490667 LBX1P52954 281 aa16.26■□□□□ 0.19
SHC1-211ENST00000490667 OS9Q13438 667 aaPredicted RBP16.26■□□□□ 0.19
SHC1-211ENST00000490667 TNFAIP1Q13829 316 aa16.26■□□□□ 0.19
SHC1-211ENST00000490667 MVPQ14764 893 aaKnown RBP16.26■□□□□ 0.19
SHC1-211ENST00000490667 GORABQ5T7V8 394 aa16.26■□□□□ 0.19
SHC1-211ENST00000490667 HHIPL2Q6UWX4 724 aa16.26■□□□□ 0.19
SHC1-211ENST00000490667 ZDHHC15Q96MV8 337 aa16.26■□□□□ 0.19
SHC1-211ENST00000490667 TCP10L2B9ZVM9 353 aa16.25■□□□□ 0.19
SHC1-211ENST00000490667 LDHBP07195 334 aaKnown RBP16.25■□□□□ 0.19
SHC1-211ENST00000490667 HSPA8P11142 646 aaKnown RBP16.25■□□□□ 0.19
SHC1-211ENST00000490667 NBPF12Q5TAG4 269 aaPredicted RBP16.25■□□□□ 0.19
SHC1-211ENST00000490667 APOBEC3HQ6NTF7 200 aaKnown RBP16.25■□□□□ 0.19
SHC1-211ENST00000490667 RASAL3Q86YV0 1011 aa16.25■□□□□ 0.19
SHC1-211ENST00000490667 PRDM10Q9NQV6 1147 aa16.25■□□□□ 0.19
SHC1-211ENST00000490667 ANGEL1Q9UNK9 670 aaKnown RBP16.25■□□□□ 0.19
SHC1-211ENST00000490667 NOP58Q9Y2X3 529 aaKnown RBP16.25■□□□□ 0.19
SHC1-211ENST00000490667 SALL1Q9NSC2 1324 aa16.24■□□□□ 0.19
SHC1-211ENST00000490667 COL1A1P02452 1464 aaPredicted RBP16.24■□□□□ 0.19
SHC1-211ENST00000490667 PPP1R12BO60237 982 aaPredicted RBP16.24■□□□□ 0.19
SHC1-211ENST00000490667 PRDX5P30044 214 aa16.24■□□□□ 0.19
SHC1-211ENST00000490667 TNNI2P48788 182 aa16.24■□□□□ 0.19
SHC1-211ENST00000490667 RASGRF1Q13972 1273 aa16.24■□□□□ 0.19
SHC1-211ENST00000490667 LDLRAD1Q5T700 205 aa16.24■□□□□ 0.19
SHC1-211ENST00000490667 CEP85Q6P2H3 762 aa16.24■□□□□ 0.19
SHC1-211ENST00000490667 GPR108Q9NPR9 543 aa16.24■□□□□ 0.19
SHC1-211ENST00000490667 FZD1Q9UP38 647 aa16.24■□□□□ 0.19
SHC1-211ENST00000490667 COG6Q9Y2V7 657 aa16.24■□□□□ 0.19
SHC1-211ENST00000490667 PCNTO95613 3336 aa16.23■□□□□ 0.19
SHC1-211ENST00000490667 CA12O43570 354 aa16.23■□□□□ 0.19
SHC1-211ENST00000490667 ZGPATQ8N5A5 531 aaKnown RBP16.23■□□□□ 0.19
SHC1-211ENST00000490667 CSRNP1Q96S65 589 aa16.23■□□□□ 0.19
SHC1-211ENST00000490667 DDX19BQ9UMR2 479 aa16.23■□□□□ 0.19
SHC1-211ENST00000490667 POLR2AP24928 1970 aaKnown RBP16.23■□□□□ 0.19
SHC1-211ENST00000490667 CACNB3P54284 484 aa16.22■□□□□ 0.19
SHC1-211ENST00000490667 DIXDC1Q155Q3 683 aa16.22■□□□□ 0.19
SHC1-211ENST00000490667 MAP3K11Q16584 847 aa16.22■□□□□ 0.19
SHC1-211ENST00000490667 IFFO2Q5TF58 517 aa16.22■□□□□ 0.19
SHC1-211ENST00000490667 TNS4Q8IZW8 715 aa16.22■□□□□ 0.19
SHC1-211ENST00000490667 TMEM39BQ9GZU3 492 aa16.22■□□□□ 0.19
SHC1-211ENST00000490667 TMOD2Q9NZR1 351 aa16.22■□□□□ 0.19
SHC1-211ENST00000490667 TSKSQ9UJT2 592 aa16.22■□□□□ 0.19
SHC1-211ENST00000490667 PDS5AQ29RF7 1337 aaKnown RBP16.21■□□□□ 0.19
SHC1-211ENST00000490667 USP2O75604 605 aaPredicted RBP16.21■□□□□ 0.19
SHC1-211ENST00000490667 TNNI3KQ59H18 835 aa16.21■□□□□ 0.19
SHC1-211ENST00000490667 SPTY2D1Q68D10 685 aaPredicted RBP16.21■□□□□ 0.19
SHC1-211ENST00000490667 REM2Q8IYK8 340 aaPredicted RBP16.21■□□□□ 0.19
SHC1-211ENST00000490667 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.21■□□□□ 0.19
SHC1-211ENST00000490667 SLC10A4Q96EP9 437 aa16.21■□□□□ 0.19
SHC1-211ENST00000490667 TEPSINQ96N21 525 aa16.21■□□□□ 0.19
SHC1-211ENST00000490667 CHMP4BQ9H444 224 aaKnown RBP16.21■□□□□ 0.19
SHC1-211ENST00000490667 ZBTB40Q9NUA8 1239 aa16.21■□□□□ 0.19
SHC1-211ENST00000490667 HMG20BQ9P0W2 317 aa16.21■□□□□ 0.19
SHC1-211ENST00000490667 ABCF2Q9UG63 623 aa16.21■□□□□ 0.19
SHC1-211ENST00000490667 DAGLAQ9Y4D2 1042 aa16.21■□□□□ 0.19
SHC1-211ENST00000490667 FPGT-TNNI3KV9GXZ4 949 aa16.21■□□□□ 0.19
SHC1-211ENST00000490667 UQCRFS1P1P0C7P4 283 aa16.2■□□□□ 0.18
SHC1-211ENST00000490667 IREB2P48200 963 aaKnown RBP16.2■□□□□ 0.18
SHC1-211ENST00000490667 PDE3AQ14432 1141 aa16.2■□□□□ 0.18
SHC1-211ENST00000490667 FKBP1CQ5VVH2 108 aa16.2■□□□□ 0.18
SHC1-211ENST00000490667 FAM83AQ86UY5 434 aa16.2■□□□□ 0.18
SHC1-211ENST00000490667 RPAP2Q8IXW5 612 aaPredicted RBP16.2■□□□□ 0.18
SHC1-211ENST00000490667 SPATA5Q8NB90 893 aa16.2■□□□□ 0.18
SHC1-211ENST00000490667 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.2■□□□□ 0.18
SHC1-211ENST00000490667 PAPPA2Q9BXP8 1791 aa16.19■□□□□ 0.18
SHC1-211ENST00000490667 UNCXA6NJT0 531 aa16.19■□□□□ 0.18
SHC1-211ENST00000490667 ARID4AP29374 1257 aaPredicted RBP16.19■□□□□ 0.18
SHC1-211ENST00000490667 MKRN3Q13064 507 aaKnown RBP16.19■□□□□ 0.18
SHC1-211ENST00000490667 CCDC158Q5M9N0 1113 aa16.19■□□□□ 0.18
SHC1-211ENST00000490667 C20orf194Q5TEA3 1177 aa16.19■□□□□ 0.18
SHC1-211ENST00000490667 CDC42EP5Q6NZY7 148 aa16.19■□□□□ 0.18
SHC1-211ENST00000490667 ERICH6Q7L0X2 663 aa16.19■□□□□ 0.18
SHC1-211ENST00000490667 CDAN1Q8IWY9 1227 aa16.19■□□□□ 0.18
SHC1-211ENST00000490667 DBNDD2Q9BQY9 259 aa16.19■□□□□ 0.18
SHC1-211ENST00000490667 USP40Q9NVE5 1235 aa16.19■□□□□ 0.18
SHC1-211ENST00000490667 RNF186Q9NXI6 227 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms