RNA–Protein interactions for RNA: ENST00000490609.1

COL2A1-207, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-207ENST00000490609 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.66■□□□□ 0.74
COL2A1-207ENST00000490609 DZIP1LQ8IYY4 767 aaKnown RBP19.66■□□□□ 0.74
COL2A1-207ENST00000490609 KLHDC4Q8TBB5 520 aa19.66■□□□□ 0.74
COL2A1-207ENST00000490609 MS4A4AQ96JQ5 239 aa19.66■□□□□ 0.74
COL2A1-207ENST00000490609 IQSEC3Q9UPP2 1182 aaPredicted RBP19.66■□□□□ 0.74
COL2A1-207ENST00000490609 MYH13Q9UKX3 1938 aa19.66■□□□□ 0.74
COL2A1-207ENST00000490609 MYO1BO43795 1136 aa19.65■□□□□ 0.74
COL2A1-207ENST00000490609 RBM5P52756 815 aaKnown RBP eCLIP19.65■□□□□ 0.74
COL2A1-207ENST00000490609 CNKSR2Q8WXI2 1034 aa19.65■□□□□ 0.74
COL2A1-207ENST00000490609 USP44Q9H0E7 712 aa19.65■□□□□ 0.74
COL2A1-207ENST00000490609 ALDH1A1P00352 501 aa19.64■□□□□ 0.73
COL2A1-207ENST00000490609 CRKP46108 304 aa19.64■□□□□ 0.73
COL2A1-207ENST00000490609 TMEM39BQ9GZU3 492 aa19.64■□□□□ 0.73
COL2A1-207ENST00000490609 MROH5Q6ZUA9 1318 aa19.64■□□□□ 0.73
COL2A1-207ENST00000490609 RBBP6Q7Z6E9 1792 aaKnown RBP19.64■□□□□ 0.73
COL2A1-207ENST00000490609 RFX5P48382 616 aaPredicted RBP19.63■□□□□ 0.73
COL2A1-207ENST00000490609 CRHR2Q13324 411 aa19.63■□□□□ 0.73
COL2A1-207ENST00000490609 OTOP1Q7RTM1 612 aa19.63■□□□□ 0.73
COL2A1-207ENST00000490609 ANKRD13AQ8IZ07 590 aa19.63■□□□□ 0.73
COL2A1-207ENST00000490609 SSH1Q8WYL5 1049 aa19.63■□□□□ 0.73
COL2A1-207ENST00000490609 ZSWIM8A7E2V4 1837 aa19.62■□□□□ 0.73
COL2A1-207ENST00000490609 TCP10L2B9ZVM9 353 aa19.62■□□□□ 0.73
COL2A1-207ENST00000490609 PDE8BO95263 885 aa19.62■□□□□ 0.73
COL2A1-207ENST00000490609 FGFR2P21802 821 aa19.62■□□□□ 0.73
COL2A1-207ENST00000490609 IREB2P48200 963 aaKnown RBP19.62■□□□□ 0.73
COL2A1-207ENST00000490609 BCAMP50895 628 aa19.62■□□□□ 0.73
COL2A1-207ENST00000490609 ELP3Q9H9T3 547 aa19.62■□□□□ 0.73
COL2A1-207ENST00000490609 CACNB3P54284 484 aa19.61■□□□□ 0.73
COL2A1-207ENST00000490609 OPTNQ96CV9 577 aa19.61■□□□□ 0.73
COL2A1-207ENST00000490609 APOBEC3HQ6NTF7 200 aaKnown RBP19.6■□□□□ 0.73
COL2A1-207ENST00000490609 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.6■□□□□ 0.73
COL2A1-207ENST00000490609 HDLBPQ00341 1268 aaKnown RBP19.59■□□□□ 0.73
COL2A1-207ENST00000490609 SLFN5Q08AF3 891 aa19.59■□□□□ 0.73
COL2A1-207ENST00000490609 CHAF1AQ13111 956 aaPredicted RBP19.59■□□□□ 0.73
COL2A1-207ENST00000490609 VGLL4Q14135 290 aa19.59■□□□□ 0.73
COL2A1-207ENST00000490609 METTL24Q5JXM2 366 aa19.59■□□□□ 0.73
COL2A1-207ENST00000490609 CD99L2Q8TCZ2 262 aa19.59■□□□□ 0.73
COL2A1-207ENST00000490609 BRI3BPQ8WY22 251 aa19.59■□□□□ 0.73
COL2A1-207ENST00000490609 MRIQ9BWK5 157 aa19.59■□□□□ 0.73
COL2A1-207ENST00000490609 TRIM17Q9Y577 477 aa19.59■□□□□ 0.73
COL2A1-207ENST00000490609 PTPRCP08575 1304 aa19.58■□□□□ 0.73
COL2A1-207ENST00000490609 POTEFA5A3E0 1075 aa19.58■□□□□ 0.72
COL2A1-207ENST00000490609 TNFAIP1Q13829 316 aa19.58■□□□□ 0.72
COL2A1-207ENST00000490609 ATG9AQ7Z3C6 839 aa19.58■□□□□ 0.72
COL2A1-207ENST00000490609 CDCA7LQ96GN5 454 aa19.58■□□□□ 0.72
COL2A1-207ENST00000490609 PTPN22Q9Y2R2 807 aa19.58■□□□□ 0.72
COL2A1-207ENST00000490609 MAP3K9P80192 1104 aa19.57■□□□□ 0.72
COL2A1-207ENST00000490609 TRMT2AQ8IZ69 625 aaKnown RBP19.57■□□□□ 0.72
COL2A1-207ENST00000490609 ZDHHC15Q96MV8 337 aa19.57■□□□□ 0.72
COL2A1-207ENST00000490609 AK9Q5TCS8 1911 aa19.57■□□□□ 0.72
COL2A1-207ENST00000490609 ZEB1P37275 1124 aaPredicted RBP19.56■□□□□ 0.72
COL2A1-207ENST00000490609 PRPF38BQ5VTL8 546 aaKnown RBP19.56■□□□□ 0.72
COL2A1-207ENST00000490609 FAM43AQ8N2R8 423 aa19.56■□□□□ 0.72
COL2A1-207ENST00000490609 SNCAIPQ9Y6H5 919 aa19.56■□□□□ 0.72
COL2A1-207ENST00000490609 CEP290O15078 2479 aa19.56■□□□□ 0.72
COL2A1-207ENST00000490609 KIF16BQ96L93 1317 aa19.55■□□□□ 0.72
COL2A1-207ENST00000490609 TBC1D22AQ8WUA7 517 aa19.55■□□□□ 0.72
COL2A1-207ENST00000490609 E9PSI1 815 aa19.54■□□□□ 0.72
COL2A1-207ENST00000490609 SP3Q02447 781 aa19.54■□□□□ 0.72
COL2A1-207ENST00000490609 CAVIN4Q5BKX8 364 aa19.54■□□□□ 0.72
COL2A1-207ENST00000490609 VPS37DQ86XT2 251 aa19.54■□□□□ 0.72
COL2A1-207ENST00000490609 TEKT1Q969V4 418 aa19.54■□□□□ 0.72
COL2A1-207ENST00000490609 MYH2Q9UKX2 1941 aa19.54■□□□□ 0.72
COL2A1-207ENST00000490609 EYA2O00167 538 aa19.53■□□□□ 0.72
COL2A1-207ENST00000490609 PUM3Q15397 648 aaKnown RBP19.53■□□□□ 0.72
COL2A1-207ENST00000490609 FAM83AQ86UY5 434 aa19.53■□□□□ 0.72
COL2A1-207ENST00000490609 ZKSCAN4Q969J2 545 aaPredicted RBP19.53■□□□□ 0.72
COL2A1-207ENST00000490609 ARMC5Q96C12 935 aa19.53■□□□□ 0.72
COL2A1-207ENST00000490609 ERO1AQ96HE7 468 aa19.53■□□□□ 0.72
COL2A1-207ENST00000490609 CCL15-CCL14A0A0B4J2E2 113 aa19.52■□□□□ 0.72
COL2A1-207ENST00000490609 SPDYE5A6NIY4 337 aa19.52■□□□□ 0.72
COL2A1-207ENST00000490609 TNNI2P48788 182 aa19.52■□□□□ 0.72
COL2A1-207ENST00000490609 CCL15Q16663 113 aa19.52■□□□□ 0.72
COL2A1-207ENST00000490609 FKBP1CQ5VVH2 108 aa19.52■□□□□ 0.72
COL2A1-207ENST00000490609 OTUD7BQ6GQQ9 843 aa19.52■□□□□ 0.72
COL2A1-207ENST00000490609 HHIPL2Q6UWX4 724 aa19.52■□□□□ 0.72
COL2A1-207ENST00000490609 OTUD5Q96G74 571 aa19.52■□□□□ 0.72
COL2A1-207ENST00000490609 EFCC1Q9HA90 598 aa19.51■□□□□ 0.71
COL2A1-207ENST00000490609 SUGT1Q9Y2Z0 365 aa19.51■□□□□ 0.71
COL2A1-207ENST00000490609 IRF6O14896 467 aa19.5■□□□□ 0.71
COL2A1-207ENST00000490609 GTF2A2P52657 109 aa19.5■□□□□ 0.71
COL2A1-207ENST00000490609 ALDH1L2Q3SY69 923 aa19.5■□□□□ 0.71
COL2A1-207ENST00000490609 BTBD19C9JJ37 291 aa19.49■□□□□ 0.71
COL2A1-207ENST00000490609 FRAT2O75474 233 aaPredicted RBP19.49■□□□□ 0.71
COL2A1-207ENST00000490609 IFIT1P09914 478 aaKnown RBP19.49■□□□□ 0.71
COL2A1-207ENST00000490609 EN2P19622 333 aaPredicted RBP19.49■□□□□ 0.71
COL2A1-207ENST00000490609 NFIAQ12857 509 aa19.49■□□□□ 0.71
COL2A1-207ENST00000490609 DIXDC1Q155Q3 683 aa19.49■□□□□ 0.71
COL2A1-207ENST00000490609 INTS3Q68E01 1043 aaKnown RBP19.49■□□□□ 0.71
COL2A1-207ENST00000490609 MIGA2Q7L4E1 593 aa19.49■□□□□ 0.71
COL2A1-207ENST00000490609 LPIN2Q92539 896 aa19.49■□□□□ 0.71
COL2A1-207ENST00000490609 ARHGAP39Q9C0H5 1083 aa19.49■□□□□ 0.71
COL2A1-207ENST00000490609 DAGLAQ9Y4D2 1042 aa19.49■□□□□ 0.71
COL2A1-207ENST00000490609 RANBP2P49792 3224 aaKnown RBP19.48■□□□□ 0.71
COL2A1-207ENST00000490609 RPAP1Q9BWH6 1393 aaPredicted RBP19.48■□□□□ 0.71
COL2A1-207ENST00000490609 SZT2Q5T011 3432 aa19.48■□□□□ 0.71
COL2A1-207ENST00000490609 CTGFP29279 349 aa19.48■□□□□ 0.71
COL2A1-207ENST00000490609 INPP5BP32019 993 aa19.48■□□□□ 0.71
COL2A1-207ENST00000490609 MOGSQ13724 837 aa19.48■□□□□ 0.71
COL2A1-207ENST00000490609 TAF1CQ15572 869 aaPredicted RBP19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms