RNA–Protein interactions for RNA: ENST00000490539.1

CSTF1-205, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-205ENST00000490539 LILRB5O75023 590 aa6.73□□□□□ -1.33
CSTF1-205ENST00000490539 FKBP4Q02790 459 aaKnown RBP eCLIP6.73□□□□□ -1.33
CSTF1-205ENST00000490539 PLAURQ03405 335 aa6.73□□□□□ -1.33
CSTF1-205ENST00000490539 ZNF326Q5BKZ1 582 aaKnown RBP6.73□□□□□ -1.33
CSTF1-205ENST00000490539 TTC39BQ5VTQ0 682 aaPredicted RBP6.73□□□□□ -1.33
CSTF1-205ENST00000490539 TXNDC2Q86VQ3 553 aa6.73□□□□□ -1.33
CSTF1-205ENST00000490539 NLRP13Q86W25 1043 aa6.73□□□□□ -1.33
CSTF1-205ENST00000490539 HOMEZQ8IX15 550 aa6.73□□□□□ -1.33
CSTF1-205ENST00000490539 CCER1Q8TC90 406 aaPredicted RBP6.73□□□□□ -1.33
CSTF1-205ENST00000490539 SLC6A14Q9UN76 642 aa6.73□□□□□ -1.33
CSTF1-205ENST00000490539 USP20Q9Y2K6 914 aa6.73□□□□□ -1.33
CSTF1-205ENST00000490539 ZNF142P52746 1687 aaPredicted RBP6.73□□□□□ -1.33
CSTF1-205ENST00000490539 VWDEQ8N2E2 1590 aa6.73□□□□□ -1.33
CSTF1-205ENST00000490539 EP400Q96L91 3159 aa6.73□□□□□ -1.33
CSTF1-205ENST00000490539 IQGAP3Q86VI3 1631 aa6.72□□□□□ -1.33
CSTF1-205ENST00000490539 GCC2Q8IWJ2 1684 aa6.72□□□□□ -1.33
CSTF1-205ENST00000490539 M0R082 166 aa6.72□□□□□ -1.33
CSTF1-205ENST00000490539 USP5P45974 858 aa6.72□□□□□ -1.33
CSTF1-205ENST00000490539 IDI1Q13907 227 aa6.72□□□□□ -1.33
CSTF1-205ENST00000490539 FAM35AQ86V20 835 aa6.72□□□□□ -1.33
CSTF1-205ENST00000490539 ZNF417Q8TAU3 575 aa6.72□□□□□ -1.33
CSTF1-205ENST00000490539 ZNF587Q96SQ5 575 aaPredicted RBP6.72□□□□□ -1.33
CSTF1-205ENST00000490539 TLR7Q9NYK1 1049 aaKnown RBP6.72□□□□□ -1.33
CSTF1-205ENST00000490539 EGFL7Q9UHF1 273 aa6.72□□□□□ -1.33
CSTF1-205ENST00000490539 KCNMB2Q9Y691 235 aa6.72□□□□□ -1.33
CSTF1-205ENST00000490539 RGS12O14924 1447 aa6.71□□□□□ -1.34
CSTF1-205ENST00000490539 NOS1P29475 1434 aa6.71□□□□□ -1.34
CSTF1-205ENST00000490539 RGS9O75916 674 aaPredicted RBP6.71□□□□□ -1.34
CSTF1-205ENST00000490539 MPSTP25325 297 aa6.71□□□□□ -1.34
CSTF1-205ENST00000490539 GRNP28799 593 aaKnown RBP6.71□□□□□ -1.34
CSTF1-205ENST00000490539 NRLP54845 237 aa6.71□□□□□ -1.34
CSTF1-205ENST00000490539 DNM1Q05193 864 aaKnown RBP6.71□□□□□ -1.34
CSTF1-205ENST00000490539 PHLDB3Q6NSJ2 640 aa6.71□□□□□ -1.34
CSTF1-205ENST00000490539 ELMSAN1Q6PJG2 1045 aa6.71□□□□□ -1.34
CSTF1-205ENST00000490539 MICALL1Q8N3F8 863 aa6.71□□□□□ -1.34
CSTF1-205ENST00000490539 TRPM4Q8TD43 1214 aa6.71□□□□□ -1.34
CSTF1-205ENST00000490539 SPACA7Q96KW9 195 aa6.71□□□□□ -1.34
CSTF1-205ENST00000490539 MPHOSPH9Q99550 1183 aa6.71□□□□□ -1.34
CSTF1-205ENST00000490539 ZFP64Q9NPA5 681 aa6.71□□□□□ -1.34
CSTF1-205ENST00000490539 PRDM6Q9NQX0 595 aa6.71□□□□□ -1.34
CSTF1-205ENST00000490539 ZFATQ9P243 1243 aa6.71□□□□□ -1.34
CSTF1-205ENST00000490539 UTRNP46939 3433 aa6.7□□□□□ -1.34
CSTF1-205ENST00000490539 ZBTB39O15060 712 aa6.7□□□□□ -1.34
CSTF1-205ENST00000490539 GHRHP01286 108 aa6.7□□□□□ -1.34
CSTF1-205ENST00000490539 SPATA31C1P0DKV0 1188 aa6.7□□□□□ -1.34
CSTF1-205ENST00000490539 MZF1P28698 734 aaPredicted RBP6.7□□□□□ -1.34
CSTF1-205ENST00000490539 SCNN1AP37088 669 aa6.7□□□□□ -1.34
CSTF1-205ENST00000490539 EIF1AXP47813 144 aaKnown RBP6.7□□□□□ -1.34
CSTF1-205ENST00000490539 GPLD1P80108 840 aa6.7□□□□□ -1.34
CSTF1-205ENST00000490539 EHHADHQ08426 723 aa6.7□□□□□ -1.34
CSTF1-205ENST00000490539 RSPO4Q2I0M5 234 aaPredicted RBP6.7□□□□□ -1.34
CSTF1-205ENST00000490539 PRRT3Q5FWE3 981 aa6.7□□□□□ -1.34
CSTF1-205ENST00000490539 PDE12Q6L8Q7 609 aaKnown RBP6.7□□□□□ -1.34
CSTF1-205ENST00000490539 ZNF438Q7Z4V0 828 aa6.7□□□□□ -1.34
CSTF1-205ENST00000490539 GLYCTKQ8IVS8 523 aa6.7□□□□□ -1.34
CSTF1-205ENST00000490539 EDEM1Q92611 657 aa6.7□□□□□ -1.34
CSTF1-205ENST00000490539 NUDT16Q96DE0 195 aaKnown RBP6.7□□□□□ -1.34
CSTF1-205ENST00000490539 MDFIQ99750 246 aa6.7□□□□□ -1.34
CSTF1-205ENST00000490539 JPH1Q9HDC5 661 aaPredicted RBP6.7□□□□□ -1.34
CSTF1-205ENST00000490539 TMEM2Q9UHN6 1383 aa6.69□□□□□ -1.34
CSTF1-205ENST00000490539 NPHP4O75161 1426 aaPredicted RBP6.69□□□□□ -1.34
CSTF1-205ENST00000490539 SCAF11Q99590 1463 aaKnown RBP6.69□□□□□ -1.34
CSTF1-205ENST00000490539 BTBD11A6QL63 1104 aa6.69□□□□□ -1.34
CSTF1-205ENST00000490539 BRD1O95696 1058 aa6.69□□□□□ -1.34
CSTF1-205ENST00000490539 CPB1P15086 417 aa6.69□□□□□ -1.34
CSTF1-205ENST00000490539 SOX18P35713 384 aa6.69□□□□□ -1.34
CSTF1-205ENST00000490539 FOXD4L6Q3SYB3 417 aaPredicted RBP6.69□□□□□ -1.34
CSTF1-205ENST00000490539 C8orf34Q49A92 452 aa6.69□□□□□ -1.34
CSTF1-205ENST00000490539 ARTNQ5T4W7 220 aa6.69□□□□□ -1.34
CSTF1-205ENST00000490539 PSAPL1Q6NUJ1 521 aa6.69□□□□□ -1.34
CSTF1-205ENST00000490539 FOXD4L3Q6VB84 417 aaPredicted RBP6.69□□□□□ -1.34
CSTF1-205ENST00000490539 NBPF11Q86T75 865 aa6.69□□□□□ -1.34
CSTF1-205ENST00000490539 ATCAYQ86WG3 371 aa6.69□□□□□ -1.34
CSTF1-205ENST00000490539 FRRS1LQ9P0K9 344 aa6.69□□□□□ -1.34
CSTF1-205ENST00000490539 RAB3GAP2Q9H2M9 1393 aa6.69□□□□□ -1.34
CSTF1-205ENST00000490539 CCDC144AA2RUR9 1427 aa6.68□□□□□ -1.34
CSTF1-205ENST00000490539 FAM135BQ49AJ0 1406 aa6.68□□□□□ -1.34
CSTF1-205ENST00000490539 KDM5AP29375 1690 aaKnown RBP6.68□□□□□ -1.34
CSTF1-205ENST00000490539 ADGRB3O60242 1522 aa6.68□□□□□ -1.34
CSTF1-205ENST00000490539 LOC102724428A0A0B4J2F2 783 aa6.68□□□□□ -1.34
CSTF1-205ENST00000490539 MMP20O60882 483 aa6.68□□□□□ -1.34
CSTF1-205ENST00000490539 ALBP02768 609 aa6.68□□□□□ -1.34
CSTF1-205ENST00000490539 NPR3P17342 541 aa6.68□□□□□ -1.34
CSTF1-205ENST00000490539 EIF2AK2P19525 551 aaKnown RBP6.68□□□□□ -1.34
CSTF1-205ENST00000490539 PRELPP51888 382 aa6.68□□□□□ -1.34
CSTF1-205ENST00000490539 SIK1P57059 783 aa6.68□□□□□ -1.34
CSTF1-205ENST00000490539 MTMR3Q13615 1198 aa6.68□□□□□ -1.34
CSTF1-205ENST00000490539 TRIP4Q15650 581 aaPredicted RBP6.68□□□□□ -1.34
CSTF1-205ENST00000490539 FAM26DQ5JW98 314 aa6.68□□□□□ -1.34
CSTF1-205ENST00000490539 NKAPLQ5M9Q1 402 aa6.68□□□□□ -1.34
CSTF1-205ENST00000490539 NUDT8Q8WV74 236 aa6.68□□□□□ -1.34
CSTF1-205ENST00000490539 PMEPA1Q969W9 287 aa6.68□□□□□ -1.34
CSTF1-205ENST00000490539 PLVAPQ9BX97 442 aa6.68□□□□□ -1.34
CSTF1-205ENST00000490539 ANO2Q9NQ90 1003 aa6.68□□□□□ -1.34
CSTF1-205ENST00000490539 ABI2Q9NYB9 513 aaPredicted RBP6.68□□□□□ -1.34
CSTF1-205ENST00000490539 SLIT1O75093 1534 aa6.67□□□□□ -1.34
CSTF1-205ENST00000490539 ICMTO60725 284 aa6.67□□□□□ -1.34
CSTF1-205ENST00000490539 PDGFAP04085 211 aa6.67□□□□□ -1.34
CSTF1-205ENST00000490539 MLLT1Q03111 559 aaPredicted RBP6.67□□□□□ -1.34
CSTF1-205ENST00000490539 HYAL2Q12891 473 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms