RNA–Protein interactions for RNA: ENST00000490346.1

ECM1-205, Transcript of extracellular matrix protein 1, humanhuman

TSL 3

Gene ECM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-205ENST00000490346 SNRKQ9NRH2 765 aa11.26□□□□□ -0.61
ECM1-205ENST00000490346 SCAF8Q9UPN6 1271 aaKnown RBP11.26□□□□□ -0.61
ECM1-205ENST00000490346 SUGT1Q9Y2Z0 365 aa11.26□□□□□ -0.61
ECM1-205ENST00000490346 AOX1Q06278 1338 aa11.26□□□□□ -0.61
ECM1-205ENST00000490346 SALL1Q9NSC2 1324 aa11.26□□□□□ -0.61
ECM1-205ENST00000490346 SPDYE2BA6NHP3 402 aa11.25□□□□□ -0.61
ECM1-205ENST00000490346 ADM5C9JUS6 153 aa11.25□□□□□ -0.61
ECM1-205ENST00000490346 LDHBP07195 334 aaKnown RBP11.25□□□□□ -0.61
ECM1-205ENST00000490346 IFIT2P09913 472 aaKnown RBP11.25□□□□□ -0.61
ECM1-205ENST00000490346 SPDYE6P0CI01 402 aa11.25□□□□□ -0.61
ECM1-205ENST00000490346 APLP1P51693 650 aa11.25□□□□□ -0.61
ECM1-205ENST00000490346 DLK2Q6UY11 383 aa11.25□□□□□ -0.61
ECM1-205ENST00000490346 TBC1D9Q6ZT07 1266 aa11.25□□□□□ -0.61
ECM1-205ENST00000490346 CDC37L1Q7L3B6 337 aa11.25□□□□□ -0.61
ECM1-205ENST00000490346 SULF1Q8IWU6 871 aa11.25□□□□□ -0.61
ECM1-205ENST00000490346 ZGPATQ8N5A5 531 aaKnown RBP11.25□□□□□ -0.61
ECM1-205ENST00000490346 TEKT1Q969V4 418 aa11.25□□□□□ -0.61
ECM1-205ENST00000490346 PRMT6Q96LA8 375 aaPredicted RBP11.25□□□□□ -0.61
ECM1-205ENST00000490346 ABCF2Q9UG63 623 aa11.25□□□□□ -0.61
ECM1-205ENST00000490346 SERPINA10Q9UK55 444 aa11.25□□□□□ -0.61
ECM1-205ENST00000490346 MAST3O60307 1309 aa11.25□□□□□ -0.61
ECM1-205ENST00000490346 ECM29Q5VYK3 1845 aa11.24□□□□□ -0.61
ECM1-205ENST00000490346 CLRN2A0PK11 232 aa11.24□□□□□ -0.61
ECM1-205ENST00000490346 HTRA3P83110 453 aa11.24□□□□□ -0.61
ECM1-205ENST00000490346 HDLBPQ00341 1268 aaKnown RBP11.24□□□□□ -0.61
ECM1-205ENST00000490346 HDAC1Q13547 482 aaPredicted RBP11.24□□□□□ -0.61
ECM1-205ENST00000490346 DIXDC1Q155Q3 683 aa11.24□□□□□ -0.61
ECM1-205ENST00000490346 ZNF512BQ96KM6 892 aaPredicted RBP11.24□□□□□ -0.61
ECM1-205ENST00000490346 AKAP11Q9UKA4 1901 aa11.24□□□□□ -0.61
ECM1-205ENST00000490346 PITPNM2Q9BZ72 1349 aa11.24□□□□□ -0.61
ECM1-205ENST00000490346 MYO1BO43795 1136 aa11.23□□□□□ -0.61
ECM1-205ENST00000490346 ZAP70P43403 619 aa11.23□□□□□ -0.61
ECM1-205ENST00000490346 SPTY2D1Q68D10 685 aaPredicted RBP11.23□□□□□ -0.61
ECM1-205ENST00000490346 ERICH6Q7L0X2 663 aa11.23□□□□□ -0.61
ECM1-205ENST00000490346 DZIP1Q86YF9 867 aaKnown RBP11.23□□□□□ -0.61
ECM1-205ENST00000490346 ZNF408Q9H9D4 720 aa11.23□□□□□ -0.61
ECM1-205ENST00000490346 VEZTQ9HBM0 779 aa11.23□□□□□ -0.61
ECM1-205ENST00000490346 NDUFB9Q9Y6M9 179 aa11.23□□□□□ -0.61
ECM1-205ENST00000490346 TRPM7Q96QT4 1865 aa11.23□□□□□ -0.61
ECM1-205ENST00000490346 CELF2O95319 508 aaKnown RBP11.22□□□□□ -0.61
ECM1-205ENST00000490346 CYP2E1P05181 493 aaPredicted RBP11.22□□□□□ -0.61
ECM1-205ENST00000490346 SPDYE2Q495Y8 402 aa11.22□□□□□ -0.61
ECM1-205ENST00000490346 HHIPL2Q6UWX4 724 aa11.22□□□□□ -0.61
ECM1-205ENST00000490346 APOBEC3FQ8IUX4 373 aaKnown RBP11.22□□□□□ -0.61
ECM1-205ENST00000490346 ZDHHC15Q96MV8 337 aa11.22□□□□□ -0.61
ECM1-205ENST00000490346 MRIQ9BWK5 157 aa11.22□□□□□ -0.61
ECM1-205ENST00000490346 TDRD3Q9H7E2 651 aaKnown RBP11.22□□□□□ -0.61
ECM1-205ENST00000490346 LRP2BPQ9P2M1 347 aa11.22□□□□□ -0.61
ECM1-205ENST00000490346 MYH2Q9UKX2 1941 aa11.21□□□□□ -0.61
ECM1-205ENST00000490346 TMEM88BA6NKF7 163 aa11.21□□□□□ -0.61
ECM1-205ENST00000490346 IGHDP01880 384 aa11.21□□□□□ -0.61
ECM1-205ENST00000490346 MECOMQ03112 1051 aa11.21□□□□□ -0.61
ECM1-205ENST00000490346 ANKRD45Q5TZF3 282 aa11.21□□□□□ -0.61
ECM1-205ENST00000490346 PRAMEF18Q5VWM3 479 aa11.21□□□□□ -0.61
ECM1-205ENST00000490346 CST9Q5W186 159 aa11.21□□□□□ -0.61
ECM1-205ENST00000490346 APOBEC3HQ6NTF7 200 aaKnown RBP11.21□□□□□ -0.61
ECM1-205ENST00000490346 ZNF384Q8TF68 577 aa11.21□□□□□ -0.61
ECM1-205ENST00000490346 GCC1Q96CN9 775 aa11.21□□□□□ -0.61
ECM1-205ENST00000490346 CDCA5Q96FF9 252 aa11.21□□□□□ -0.61
ECM1-205ENST00000490346 RWDD1Q9H446 243 aaPredicted RBP11.21□□□□□ -0.61
ECM1-205ENST00000490346 PIH1D3Q9NQM4 214 aaKnown RBP11.21□□□□□ -0.61
ECM1-205ENST00000490346 CREBZFQ9NS37 354 aa11.21□□□□□ -0.61
ECM1-205ENST00000490346 RAI14Q9P0K7 980 aa11.21□□□□□ -0.61
ECM1-205ENST00000490346 ZNF70Q9UC06 446 aaPredicted RBP11.21□□□□□ -0.61
ECM1-205ENST00000490346 DAGLAQ9Y4D2 1042 aa11.21□□□□□ -0.61
ECM1-205ENST00000490346 MYO5AQ9Y4I1 1855 aaKnown RBP11.21□□□□□ -0.62
ECM1-205ENST00000490346 GAKO14976 1311 aa11.2□□□□□ -0.62
ECM1-205ENST00000490346 ATP5JP18859 108 aa11.2□□□□□ -0.62
ECM1-205ENST00000490346 CACNB3P54284 484 aa11.2□□□□□ -0.62
ECM1-205ENST00000490346 NSUN4Q96CB9 384 aaKnown RBP11.2□□□□□ -0.62
ECM1-205ENST00000490346 DNAJC2Q99543 621 aaKnown RBP11.2□□□□□ -0.62
ECM1-205ENST00000490346 ANTXR1Q9H6X2 564 aa11.2□□□□□ -0.62
ECM1-205ENST00000490346 MAST2Q6P0Q8 1798 aa11.2□□□□□ -0.62
ECM1-205ENST00000490346 MROH7-TTC4A0A0A0MT08 1334 aa11.19□□□□□ -0.62
ECM1-205ENST00000490346 TCP10L2B9ZVM9 353 aa11.19□□□□□ -0.62
ECM1-205ENST00000490346 IDH1O75874 414 aaKnown RBP11.19□□□□□ -0.62
ECM1-205ENST00000490346 GSTO1P78417 241 aa11.19□□□□□ -0.62
ECM1-205ENST00000490346 TSHZ3Q63HK5 1081 aa11.19□□□□□ -0.62
ECM1-205ENST00000490346 B4GALNT3Q6L9W6 998 aa11.19□□□□□ -0.62
ECM1-205ENST00000490346 CDC42EP5Q6NZY7 148 aa11.19□□□□□ -0.62
ECM1-205ENST00000490346 SLF2Q8IX21 1173 aa11.19□□□□□ -0.62
ECM1-205ENST00000490346 OTUD7AQ8TE49 926 aaPredicted RBP11.19□□□□□ -0.62
ECM1-205ENST00000490346 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.19□□□□□ -0.62
ECM1-205ENST00000490346 DEFB129Q9H1M3 183 aa11.19□□□□□ -0.62
ECM1-205ENST00000490346 BOLA2Q9H3K6 86 aa11.19□□□□□ -0.62
ECM1-205ENST00000490346 ECHDC1Q9NTX5 307 aa11.19□□□□□ -0.62
ECM1-205ENST00000490346 TMOD2Q9NZR1 351 aa11.19□□□□□ -0.62
ECM1-205ENST00000490346 ZBTB47Q9UFB7 747 aaPredicted RBP11.19□□□□□ -0.62
ECM1-205ENST00000490346 ABT1Q9ULW3 272 aaKnown RBP11.19□□□□□ -0.62
ECM1-205ENST00000490346 CEP350Q5VT06 3117 aa11.19□□□□□ -0.62
ECM1-205ENST00000490346 GOLIM4O00461 696 aa11.18□□□□□ -0.62
ECM1-205ENST00000490346 BTDP43251 543 aa11.18□□□□□ -0.62
ECM1-205ENST00000490346 TNFAIP1Q13829 316 aa11.18□□□□□ -0.62
ECM1-205ENST00000490346 RASA3Q14644 834 aa11.18□□□□□ -0.62
ECM1-205ENST00000490346 NAA16Q6N069 864 aaPredicted RBP11.18□□□□□ -0.62
ECM1-205ENST00000490346 SMC5Q8IY18 1101 aa11.18□□□□□ -0.62
ECM1-205ENST00000490346 EDC3Q96F86 508 aaKnown RBP11.18□□□□□ -0.62
ECM1-205ENST00000490346 FAM163AQ96GL9 167 aaPredicted RBP11.18□□□□□ -0.62
ECM1-205ENST00000490346 GPATCH3Q96I76 525 aa11.18□□□□□ -0.62
ECM1-205ENST00000490346 GBA2Q9HCG7 927 aaPredicted RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms